Callorhinchus milii (elephant shark): 103180989
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Entry
103180989 CDS
T03088
Symbol
zfr
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmk03041
]
103180989 (zfr)
Spliceosome [BR:
cmk03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
103180989 (zfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
103180989
NCBI-ProteinID:
XP_007895347
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MIPICPVVSFTYVPGRLGEDAKMATSNYFGFTHGGAAQYSQQPATGIAYSHPTTAGSYTV
HQAPVAAHAVTAAYAPAAAASAARPVPAAAAAAVATAAYGGYQTAHTAADYGYAQRQQEA
PPPPPPVTTQNYQDTYTYVRSTAPALAYDSKQYYPQPTAAAQPQPTAAEAYYQAAAKAGY
SQAATQYTQAQPTRQVTAIKPAAPNPATTTFTVYPVSTTVQPAAAAAAAAAATVVPSYTQ
SGTYGSTAVTYTGATYAGYEAAVYSAASSYYQQQQQQQQKQAAAWAGTTFTKKVPFQNKQ
KPKQPPKQPQIHYCDVCKISCAGPQTYREHLEGQKHKKKEAALKSTNQSSSTGVARGVQN
QLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPSVVSQTATTTMTGAS
SKPTAPNPPTGTSSTAAAAATVNATVPTVAPAKSNPVTAGPVNNAANKLVAPKKATTPKI
TFVGGNKLQTTGPKNEEVKAAEVRVTSPPIQEMKPEPAVEPMTTLASLQNDVQPVGHDYV
EEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKGRRHRLQYKKKVNPELQVEVKPSIRAR
KIQEEKMRKQMQKEEYWRRREEEERWRMEMRRYEEDIYWRRVEEEHHYWDDRRRMGDGYP
PGLLGVRPGMLQPQGPLPPRRPDSSDDRYVMTKHAAIYPTEEELQAVQKIVSHTERALKL
VSDFITEQDKPKKEEEKKEISKERDENQRALKGVMRVGVLAKGLLLRGDKNVNLVLLCAE
KPTGALLNRIAENLPKQIAVTTPEKYEVKCCIPEASIVLSSCTEPKMQVTITLTSPIIRE
ENMRDGDVTSVMVKDPPNVLDRQKCLDALAALRHAKWFQARANGLQSCVIIIRILRDLCQ
RVPTWGVLPGWAMELLVEKVISSASGPLSPGDAMRRVFECVASGILLSGGPGLYDPCEKN
PSDTLTSVAAQQREDITASAQFALRLVAFRQIHKVLGMDPLPQTNPRFSVRNRKRRRDNS
DGTDGLEAEGKKDKKDFDGGEF
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgattcctatatgcccagtcgtttctttcacctacgtgcccggccggctcggcgaagat
gccaaaatggctaccagtaactactttggatttacccatggtggtgctgcacagtacagc
caacagccggccactggcatcgcatactcccatcccaccacagctggcagctacactgtc
catcaggccccagtagctgctcacgctgtgactgcagcttatgctcctgccgctgctgct
tcagcagccaggccagttccagctgctgcagcagctgctgttgccacagctgcctatggg
gggtatcagactgcacacacagcagcagactacggatatgcacaacggcagcaagaagcc
cctccaccgccgccgccagtcaccacacagaactaccaggatacctatacatacgtgaga
tccacagcaccagctctcgcctatgacagtaaacaatactatccgcagcctactgctgcg
gctcagccacaacccactgcagcagaagcttactaccaagctgctgcaaaggcgggatat
agccaagctgcaacacaatacacccaggcacaaccgactcgccaggtcacggcaataaaa
ccagctgcacccaacccagcgacgaccaccttcactgtttatcctgtctccaccaccgtg
cagccagctgcagcagctgctgcagccgccgcagccactgtggtgccatcctacactcaa
agtggtacgtacggctcaaccgctgtgacttacactggggctacgtatgctggatatgaa
gctgcagtgtattctgctgcatcgtcctattaccaacagcaacagcagcaacaacagaaa
caagcagcagcttgggctgggaccactttcaccaagaaagtgccatttcagaataaacag
aaaccaaagcagccacccaaacagcctcagatccattactgtgatgtttgcaagattagt
tgtgctgggccacagacctacagagaacatttggaagggcaaaaacacaagaagaaggaa
gctgctctgaaatccacgaaccagagtagtagcacaggagtggctcgaggtgttcagaat
cagctgcgttgtgagctctgtgacgtttcttgcaccggtgcagacgcttatgcagctcat
attcgtggagcaaaacaccagaaggtagtcaaattgcataccaagctcggcaagcctatt
ccatcaacagaaccaagcgtggtgagccaaaccgccacaacaacaatgactggagcctcc
agcaagccgactgctccaaaccctcccacagggaccagcagcactgctgctgctgctgct
actgttaatgctactgttcccactgttgctccagcaaagtccaaccctgtgactgctgga
cctgtcaataatgctgctaacaaactggttgctcctaaaaaagcaacaacaccgaagata
acctttgtagggggtaacaagttgcaaaccacagggccgaaaaatgaggaggtcaaagca
gctgaagtcagggtgacttcaccacctattcaagagatgaaacctgagccagcggtggag
ccgatgaccacacttgcttcattgcagaacgacgtccaacctgttggtcatgattacgta
gaagaggttcgaaatgatgaaggaaaagtgattcgcttccactgcaaattatgtgaatgc
agctttaacgatcctaatgcaaaggaaatgcacctgaaaggaagaagacatcgactgcag
tataagaaaaaagtaaatccggaattgcaagtggaagtaaaaccaagcattcgagcaaga
aaaatccaagaagaaaagatgagaaaacaaatgcaaaaggaagaatactggagaagaagg
gaggaggaggagcgctggcgcatggaaatgcgaaggtatgaagaggatatctattggagg
cgagtggaagaggaacatcattactgggacgatcgccgcagaatgggtgatgggtatcct
ccaggcttgcttggagttcgaccaggaatgttacagccccaaggaccactgcctcctagg
cgtccagattcctcagatgatcgctatgtgatgaccaagcatgctgccatctatccaact
gaggaagagctgcaagcggtccagaagattgtctcacatactgagcgtgctcttaaactt
gtatctgacttcatcacagagcaagataaaccaaagaaagaggaagaaaagaaggaaatt
agcaaagagagggatgaaaaccagagagccttgaagggggtaatgcgtgtcggtgtactc
gctaaaggattgctcttgcgcggagacaagaatgtgaatctagtgctgctttgtgcagag
aaaccgaccggagctctactgaatcgcattgcagagaacttgccaaaacaaatagcggta
acaacccctgagaaatatgaagtgaaatgctgcataccggaagcatccatagttctgtcc
tcgtgtacagaacccaaaatgcaagtcaccatcactcttacatccccaatcattagagag
gagaacatgagggatggagatgtcacctcggttatggtgaaagacccaccgaacgtcttg
gacaggcaaaaatgccttgacgctctggctgctctccgccacgctaagtggttccaggct
agagccaatggtctccaatcctgcgtgattattattcgcattcttcgtgacctctgccag
cgtgtaccaacctggggagttttgccaggctgggccatggagttgctggtggaaaaggta
atcagcagtgcttctggacctcttagccctggtgatgccatgaggagagtttttgaatgc
gttgcttctggaatactcttatcaggtggtcctggattatatgacccatgtgaaaagaat
cccagtgacacactgacttcagtggctgcacaacagcgggaagatatcacagccagtgca
cagtttgcgttgagattggtagcattccgacagattcacaaagtcctgggaatggatcca
ttacctcagacaaatccacgtttcagtgttcgcaaccgcaagaggagaagggacaacagt
gatggcactgatggattggaagcggagggaaagaaggataaaaaagattttgatggtggc
gagttttaa
DBGET
integrated database retrieval system
