Callorhinchus milii (elephant shark): 103181121 Help Entry 103181121         CDS       T03088                                  Name (RefSeq) dmX-like protein 1 isoform X2   KO K24155   rabconnectin-3a Organism cmk  Callorhinchus milii (elephant shark) Pathway cmk04142   Lysosome Brite KEGG Orthology (KO) [BR:cmk00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     103181121  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cmk04131]     103181121 Membrane trafficking [BR:cmk04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     103181121  Endosome - Lysosome transport   Acidification regulators    Rabconnectin-3 complex     103181121    RAVE complex     103181121 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Rav1p_C WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_IFT140_1st Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_HPS5 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_SCAP WDR90_beta-prop_4th Motif Other DBs NCBI-GeneID:  103181121 NCBI-ProteinID:  XP_007895555 LinkDB All DBs Position Unknown AA seq 3039 aa AA seqDB search MNLHQVLTGAVNPGDNCFSVGNVGEEPFTAYASGCDIVILGSDFERLQIIPGAKHGNIQV GCVDCSLQQGKIAASYGNVVCIFEPVPLLNRRGKYSKPNHQWQKSGQLLLQSVAHNLAWD TQGIRLLTGSNALQFWSNVNLEMCATEEEAADETDPNEISDWRCIWESKTASPIHLLKVS PDGEFFATAGKDDCLVKVWYNTSSWQSAMMTPFIPVDKREGDIDFSFVYLAHPRAVTGIS WRKTSKYMPRGSNCDVLLTCCKDNVCRIWAETILPGDSLLSGEGHTQCSESIILTNNLTR NVPSRDKLNIKQLRRGRRRSGHVANSGYLPHQQDAHEVHRNAPVHANSLCHFHIAASINP ATDIPLLPSITSLSLGENEETNGPFVVHWLNNKELHFSLSMEVFLQQLRRSLEQQSPESG TEDFGQVENKSDEENDENNEPPKGFMRPVPSEKNTGEKTLSGLTPLPAAMIDHKIELLLA EWNKNADMLFSIHPVDGSLLVWHVDWLDEYQPGMFRQVQVSFASRIPVAFPTGDANSLSK SVVMYACTKNVDLAIEQGKQKPAGLSHSTSGMLISAGQNKSSGSLKLSIFTPSVLMISKH ADGSLNQWTVSFAEESAFSTVLSVSHKSRYCGHRFHLNDLACHSVLPLLLTTSYHNALRT PDGESLHENRSFDCLRLSGSQSRYQRQSNTLTTFQDSSSIYSELILWRVDPVGPLSYSGG VSELARINSLHISAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGRYLRLYQSVIDAKK LLSELSNPEISRFVGEVFNIVSQQSTARPGCIIELNAITELYGKETQLLHVFKEDFILVN QNNSMQHNKRNPSQETDPQPQAGEPQEGFSEKFFLVVIEHKQNNRSALHMWHLHLKSVQV SVGNTPETSPTPAAEPDSSIPEKSPSPFLKKYQACKANLQSASRLTLTSERVYSQELPLP EGVEIIRCTPSAGHLSSSSVHPSCLAPYLLATSCSDGKVRFWRCRASSQLVSSAAGDTGE SGLAYSWEEWPLLIEEGLHSSSAVYVPGRPVDVSCSYTSRLAVAYKQTIPVNGHSSKHFT MHVGIFECESTGGSQWIHEQTIHLDDFSHSCTTLDPRVSIDSNLVVYNKEDLHLINDSHV AFDSKPLVHLDWVSKEDGSHILTIGIGSKLIMYGQMSGLVQDQTKKEAPAFVALSLWDSA KEVSRSRWVLLRSVDLVSSVDGSLSLPVSLSWVRDGILVVGMDCEMHVYSQWQPPDKLDT TVTDVDIGSTPSIASLAKYSCASGSNPSLYKRTLTRSMTGLAQKFCGKKIPYNWSVEMED SGLFEASHNLSPTLPQYHPLQLLELMDLGKVRRAKAILSHLVKCIAGEVITPRDVQTSHE RRLRSLTISASGSTARDPLTANKNENPDYTEIDSVPPLPLCALLAADEDTSHTTFEKPSK RTNFRKKNKYQSTGNNYDELFETSVGTEDLSLLDVFGDVYASKIIDLSQYSPTYFGPEHA RVLSSHLLHSSLPGLTSMEQMFLMALADTVATISTDIGESRERAQGGETLDECGLRFLLA MRLHTFLSTSLPPVYRAQLLRQGLSTCHFAWAFHSEAEEELLSMIPAIQRGDPHWSELRA MGVGWWVRSNNTLRKCIEKVAKAAFQRNNDPLDAAIFYLAMKKKAILWGLFRSLQDKKMT EFFGKNFTDDRWRKAALKNAFALLGKQRFEQSAAFFLLAGSLKDAVEVCLERLHDIQLAL VISRLHESEFEVSSTYKSILFRRLLGFDTKSKELNPSFMHPDPVLRSMAYWILEDYTNAL TTLLEQGMRETDDCNGTTEECDNSASCNPGVFNFYNYLRTHPLLMRRHFASSEKTATHMG LTMESGLADKISLVERRLFFTTANAHFKAGCPMLALEVLSKMPAVNMKSQASQNKGSSRL TKLSSSVEESEQKSFDLDRSLPVLNGFGHKATSNWMSSGQSDSSLSFDWSCSSQTIEEEP LELKWDSDKEDEEEEPGLAMKEITLQYPVAEKTKEEHHNNTHFSSSYGDADDYLSPSKDV IAAQLKFGACLKILTTELRTLSTGYEVDGGKLRYQLYDWLEREILALQKTCNYNIDVDGL KNGFEETLDKMTTNEQTENEMYDQERAIRQQDYLQRKRLWLRKNQPLLRMFLSYCSLHGS HGGGLASVRMELILLLQESQQEHSVKQFANPLLQPASIPLLFASTASAKIVVANPVLHLS NLTHDILHTIVEFDSPPHPDIKNSQIYVMHTVAASLSACLYQCLCNGHSYSSSYANRFTG MVYQGFFFTQQRSHRAASLDGTVSPNTSPHQWPGIKQLIHLLNSAGDEDRPKLAVLLCEV LTAVYFSLFAHGLATHASNELFRLVAHPLNSNMWAAVFGGGAQVPVKSNSQSTHSTVVAA PPEDKRHSRFKLLTSQSESREFKAPEVSASPIVNQELPNYKEKFIPPELSIWDYFIAKPF VHPLQSIIEYDSEDSQDSDEEEEDAFATDTQLQEHSNPNSFSWSLMRFAMVQLVLRNIKN FYPMAGLELSELPVCSPICHIILKTLQRWEQVLLRRLELFGGPPPDFITLHGTVSAGPAI LLHKMLLEPSNTPFKSKHHSALPVKRLWQYLLKQEEVQDTFIRNIFTKKRGPNEMETDSA YPGGRTRIVHKESDIITAFAINKANRNCIAVATSHDIQELDISAILATQIYTWVEDDLDQ ESKLDDFLLVHTRDDLSDIQGSTPYTPSVPGTPINMPWLGSTQTGRGASVMIKRTMNNAR RMASHPTLPYYLTGAQDGSVRMFEWGHSHQIACFRSSGNSRVTRIRFNHQGNKFGIVDGD GFLSLWQSNTIALGVTPKPYLTWQCHNKTANDFVFVSSSTLIATAGQSSDNRNVCLWDTL VPQSNNLVHAFICHDSGATVLVYAPKHQFLLSGGRKGLICIFDLRQRQFCQTLHAHESPV KAIAVDPTEEYFITGSSEGDMKVWHFSTQKVLHTFASEHSRQSIFRNIGTGVMQIEIGPS NHMFSCGADGTMKMRILPDRFSTGSGKLDIWQNDVKFIL NT seq 9120 nt NT seq  +upstreamnt  +downstreamnt atgaacctgcaccaggtgctgaccggcgccgtcaacccgggagacaactgcttctctgtg ggcaatgtgggtgaggagcccttcacggcttacgcttcaggatgtgatattgtgatttta ggtagtgattttgaaagacttcagattataccgggcgcaaaacatggaaatatacaagtc ggatgtgttgattgctccctgcagcaaggaaagatcgcagcctcctatggaaatgtggtt tgcatttttgagcctgtgcctctcttaaatcggagaggtaaatattctaaaccaaatcac cagtggcaaaaaagtggccaacttttattacagtcggtggcacacaatttagcatgggat acacaaggaattcgcctcttgactggttcgaacgctttacagttctggtccaatgtgaat ctagaaatgtgtgcgactgaagaggaggctgcagatgagactgatccaaatgaaatcagt gactggagatgcatttgggaatccaaaactgcatcacctatccacctgctaaaggtttct cctgatggtgaattttttgctactgcaggaaaggatgattgtcttgtgaaggtgtggtac aataccagtagctggcagtcagctatgatgacgcctttcattccagtggacaaacgggaa ggagacatagatttttcattcgtgtacttagcccatcctcgagctgtgacaggtatttcc tggcggaagaccagcaagtatatgccaagaggttctaactgcgatgttttgttgacctgc tgcaaggacaatgtttgtcggatttgggcggagactatacttccgggtgacagtttgctg tctggagaaggccacactcagtgctctgaatcaatcattttaaccaacaacctcacgaga aatgttcccagtcgggataagttgaacatcaaacaacttcgaagaggaagaagaagatct gggcatgttgcaaattctgggtatttaccccaccagcaagatgcacatgaagttcataga aatgcacctgtgcatgcaaattcactgtgtcattttcacatagcggctagtatcaatcca gcaacagacattccactgctgccctccatcacttcgttgagtttaggcgagaatgaagaa actaatggaccatttgtagttcattggttgaacaacaaagagctgcatttctcactgtcc atggaagtatttttacaacagcttcgtagaagcttggagcaacaatccccagagtctggg acggaggactttggacaagtggagaacaaatctgatgaagaaaatgatgaaaataatgag cctcctaaaggatttatgaggcctgtaccttcagagaaaaatactggagaaaagactttg tcaggccttacacctctcccagccgccatgattgatcataagattgaattgctgctcgca gaatggaataagaatgcagacatgcttttcagtattcatcccgtggatggttctttatta gtgtggcatgtggactggctggatgaataccaacctgggatgtttcgacaggtgcaggtt tcgttcgcctctagaattcctgttgcattcccaactggtgatgcaaactctctcagcaag agtgtagtgatgtatgcctgcaccaaaaatgtagacctcgctatcgaacaagggaaacag aagcctgctggattgagccactctacatctggcatgctaatctctgctggccagaataaa tcatctggtagtctaaaactgagcattttcacacccagtgtgcttatgatctcaaagcat gcagatgggtccttgaaccagtggactgtcagctttgcagaggagtctgcattttcaact gttctcagtgtgtctcacaaatcgcgatactgtggtcatcgctttcacctcaatgattta gcttgtcattcagttctgccattgctcctgacaacgtcgtatcacaatgcactgcgaaca ccggatggtgagagtctgcacgagaacaggagttttgactgcctaaggctcagtggttca cagtcgagataccagagacagagcaatacattgactacattccaggattctagttctata tacagtgaactaattctgtggagagttgatccagtggggccattgtcgtactctggagga gtatctgagcttgcccgaatcaattctcttcacatttcagcattttcaaatgtggcttgg ctgcctaccctcatcccaagttactgccttggtgcatactgcaactctccaagtgcttgc tttgtggcaagtgatggccgttatttacgattataccaatctgttattgatgctaaaaaa cttttaagtgagctttctaatccagaaatttctaggtttgttggagaggttttcaacatc gttagccagcagtcgacagcaagaccgggctgtattatagagctaaatgccatcactgag ctttatggaaaggagacacagttgcttcatgtctttaaggaagacttcattctagttaat caaaacaacagcatgcagcataataaaagaaatccctctcaggaaacagacccacagccg caagcaggagagccgcaggaaggattttcagagaaattctttttggtggtaatagagcat aaacagaataatcgttcagccctgcacatgtggcatctacacctgaaatctgttcaggtc tctgtgggtaacacacctgaaacctcgccgacacctgcagcagaaccagatagctccatc cctgaaaaatcaccatctccttttcttaaaaaatatcaagcttgcaaagcaaatttacaa agtgccagtagactgactcttacctcagaaagagtttacagtcaagaattacctcttcca gaaggagtggagattattagatgtactccatctgcaggacacctcagttcttcgtcagtt catccatcttgcttagcaccatatcttttagcaacttcctgctcagacggaaaggttcga ttctggcgctgtcgagcctcttcacaactggtatcttctgcagcaggggacactggggag agtggcttggcttattcctgggaagaatggccactgcttattgaggaaggacttcatagc agcagtgccgtgtatgtaccagggaggccagtggatgtaagctgttcatacacaagccgg ctggctgtggcttacaaacagacaataccagttaatggtcattccagtaagcacttcacc atgcatgttggaatatttgaatgcgagtccactggaggctctcagtggattcatgagcag acaatccacttggatgactttagccatagttgtacaacgttggacccaagagtcagtata gatagcaatttagtggtttataataaagaagatttgcatttgatcaatgacagtcatgtg gcttttgactcaaaacctttggttcacttagattgggtctccaaagaagatggatctcat atcttaactataggaattggatccaagcttataatgtacggacagatgtctggattagta caagatcagacaaagaaagaagcaccagcttttgttgcattatctttgtgggacagtgcc aaggaagtctctcgatctagatgggtgcttctcaggagcgtggacctggtgtcctcagta gacggatctttatcactgcctgtttccctctcctgggtgcgtgacggcattcttgtggtg gggatggattgtgaaatgcatgtttattcacaatggcaaccacctgataaattggacaca acagtcactgatgttgatattggtagcactccttcaatagctagccttgcaaaatacagt tgtgctagtggttccaatcctagcctgtacaaaagaacactgaccagatcgatgactggg cttgctcagaaattttgtggcaaaaagattccatataactggagtgttgagatggaggac tctggcctctttgaagcatctcataatttatcccccactctgcctcaatatcatcctttg cagcttttggagttgatggatttgggcaaggtcagacgagccaaagccattttgtctcat ctggtcaaatgtattgcaggagaagtaatcactcctcgtgacgttcaaactagccatgag cgtcgtcttagatctttgaccatcagtgcaagtggcagcaccgcaagagatcccttaact gctaataaaaatgaaaatcctgattacacggaaatagattctgttcctcctcttcctctg tgtgcacttctagctgctgatgaagatacttctcataccacctttgaaaaacctagcaaa agaactaattttaggaagaaaaataaatatcagtcaacaggaaacaactatgatgaactc tttgagacctctgttggtacagaagatttaagtctcttagatgtctttggcgatgtctat gcatccaaaattattgatctttctcagtacagtcctacctattttggacccgaacatgct cgagtactatctagccatttgcttcattccagtctacctggacttaccagtatggagcag atgtttttgatggcactagcagatactgttgcaaccatcagcacagatatcggagaaagc cgagaaagagcccaaggtggagagactcttgatgaatgtggattgagatttctcctagcc atgcgattgcatacattcctttcaacatcactccctccagtatatcgggcacaacttctt cggcaaggtttgtctacttgtcattttgcctgggcctttcattcagaagctgaggaagag ctattaagcatgatccctgcaatacagagaggagatcctcactggtcagagcttagagcc atgggagtcggttggtgggtgcgcagcaacaatacacttcgcaaatgcattgagaaggtt gccaaagccgctttccaaagaaataatgatcccttagatgcagccatattttatcttgca atgaagaaaaaggctatattgtggggtcttttcaggtctcttcaagacaaaaaaatgaca gagttttttggaaagaatttcaccgatgacagatggagaaaggctgcattgaagaatgcc tttgctttattgggtaaacagcgatttgagcagtcagcagctttcttccttttggctggt tctcttaaggatgctgttgaggtttgtcttgaaagacttcatgatattcaactagctctt gtaatatcccgcttgcatgaatctgaatttgaagtttcatccacctacaaatccatactc tttcgaagattgctgggatttgatacgaagagtaaagaattgaacccatctttcatgcac cctgatcctgtccttcggagtatggcttattggatattagaagattacacaaatgctctg actactctattggagcaaggaatgagagaaactgatgactgcaatggaacaacagaagag tgcgacaactctgcgtcatgtaaccctggagtatttaatttctacaactatttgcgcacc catcctcttttgatgcgacggcactttgcttcctctgagaagacagccacccatatgggt ttaacaatggaaagtggcctggccgataagatcagtttggttgaaagaagactgttcttt acaactgcaaatgcacattttaaagctggctgtcccatgttagcccttgaagtcttatcc aaaatgccagcagtcaacatgaagtcgcaggcttcacagaacaaaggaagttctcgttta actaagttgtcatcttcagtggaagaatcggagcaaaaatcttttgatttggacaggtcc cttccagttttaaatggttttggacataaggccacttcaaattggatgtcaagtggacaa tcggattcgtctcttagttttgactggagttgctcctctcagactattgaagaagagcct ttggagctaaaatgggacagcgataaggaagatgaagaggaagaacctggcttagcaatg aaggaaattacgctacaatacccggttgcagagaaaaccaaagaagaacatcacaataat acacatttttcctcctcttatggtgatgctgatgattatttaagtccatcaaaagatgta atagcagcacaactcaagtttggagcttgcttaaagatactaacaacagagctgcgtaca ttatccacgggttatgaggttgatggtggcaaacttcgttaccaattgtacgattggctg gagagagaaattctagctctacagaagacctgtaattataatattgatgtggatggtttg aaaaatggttttgaagaaaccctggataaaatgacaaccaatgaacagacggaaaatgaa atgtatgaccaggaaagagcaatacgacagcaagactatttgcaacggaagcggctgtgg ctgcggaaaaaccagccacttctgcgaatgtttcttagctactgcagccttcatgggtct catggtggtggtcttgcatcagtcaggatggagttaattcttcttttacaggaatcacag caggaacattctgtgaagcagtttgctaatcctttgctacaacctgcatctataccgctc ctatttgctagcacggcaagtgcaaaaatagttgtagccaaccctgtactccatctgagt aaccttacacatgacatcctgcacaccattgtggagtttgattctcctccacatccagac atcaaaaacagtcagatatacgtaatgcacactgtagcagcttctctttctgcatgcctc tatcagtgtctttgcaatggccacagttacagttcttcatatgcaaaccgattcactgga atggtctatcagggctttttctttacacagcaacgctcacacagagcagcaagtttagat ggcacagtgtctcccaatacatcccctcatcagtggccaggtataaagcagttaatccac ctattaaattctgctggggacgaagacaggcccaaattagcagtcctgctgtgtgaggtc ttgactgcagtttacttcagtctttttgctcatggcctggcaacacatgccagcaatgag cttttccgacttgtagctcatcctcttaacagcaacatgtgggctgcagtatttggtgga ggtgcccaagttcctgtgaaaagcaacagccagtctacacatagtacagtggttgctgct cctcctgaagataaacgtcacagtcgcttcaaactcttgacgtcccaatcagaaagcaga gagttcaaagcacctgaggtatctgcctctcccattgtcaaccaggagcttccaaattat aaagagaagttcatcccacccgagctcagtatctgggattattttatagcaaagcccttt gttcacccattacaaagcataatagagtatgactcagaagatagccaagacagtgatgaa gaggaagaagatgcttttgctacagacacacaactacaggaacactccaatcctaattct ttcagctggtcactgatgcgatttgctatggtgcaattggtgttacgcaatatcaaaaac ttttacccaatggcagggctggagctttcagagcttcctgtttgctccccaatttgccac attattttgaagactcttcagcgttgggagcaagtgttgcttcggcggcttgaattgttt ggtggccctcctccagacttcatcaccctgcatggcacagtgtctgctggacctgctatt ctactccataaaatgctgctggagccctcaaatacacccttcaagtcaaagcaccattct gcacttcctgtaaagagactttggcaatacctcttgaaacaggaggaagttcaagacacc ttcattagaaacattttcacaaagaaaagaggtccaaatgagatggaaactgattctgct taccctggtgggaggacaaggattgtacataaggaatctgacataattacagcatttgcc attaataaagctaatcggaattgcatagcagtagccactagtcatgatatccaggagctt gatatatctgcaatcctggctacccagatctacacatgggtggaagacgacttggatcaa gaatcaaagttggatgatttcctgctggttcatactcgagatgatttgagtgatatccag ggcagcacgccttacactcccagtgttcctggtacccccataaacatgccttggctaggc agtacacagaccggtagaggggcatctgtgatgatcaaacggactatgaataatgccagg aggatggcttcccatccaacattaccttactatctaacgggtgctcaagatggaagtgtt cggatgtttgaatggggtcactcacatcagatagcgtgcttccgatcttctggcaattcc agggttaccagaatacgatttaatcatcagggtaacaagttcggtattgttgatggagat ggattcttgagtttgtggcaatcaaacacaattgcactgggagtcacgccaaaaccttac ctgacttggcagtgccataacaaaactgcaaatgattttgtttttgttagttcttctact ttaatagcaacagcgggacaatccagtgacaataggaatgtctgtctttgggatacgctg gtgccacaaagtaataacttagttcatgctttcatatgccatgacagcggagccacagtg ctggtgtatgcaccaaagcatcaatttttgctatctggaggaagaaaaggtttgatttgt atatttgatctacgtcagcgacagttctgtcagaccttacatgcccacgaatcgcctgtc aaagcaattgctgtggatccaacagaggaatatttcattactgggtcttctgagggtgac atgaaggtctggcatttttccactcaaaaagtgcttcacacatttgcaagcgagcactct cgccagtcaatcttcagaaacataggaacaggagtcatgcaaatcgagattggaccaagc aatcatatgttctcttgtggagctgatgggacaatgaagatgagaatcctgccagatcgc ttcagcacagggagtggaaaactagatatctggcaaaatgatgttaaatttatactatga

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