Callorhinchus milii (elephant shark): 103181281
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Entry
103181281 CDS
T03088
Symbol
usp38
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cmk01002
]
103181281 (usp38)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmk04121
]
103181281 (usp38)
Enzymes [BR:
cmk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103181281 (usp38)
Peptidases and inhibitors [BR:
cmk01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103181281 (usp38)
Ubiquitin system [BR:
cmk04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103181281 (usp38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
103181281
NCBI-ProteinID:
XP_007895834
UniProt:
A0A4W3K7J1
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MMDKILEALITSSHPLPVKKGIVKKVVEAAENSVDREQCKAMFDLTTRLILLGEDGFQKQ
VGHQVLEAYARYHRSEFEEFFNKGFVLTLLQQGYKSLDKKDIVIIDYIHMGLKLIMSCPS
VLEIFGFMHTEVLRIVCERPEPLLCARLSELLSDFVHCIPRGKSAVVFCQQLVRTISQFQ
CTAIQEEEIRAFISQVNKVGSLLQSIWKSEPAALLPSLQEVFVIISATDYSFEPSIALAS
LVQHIPLQMIAVLIRSLITDQNVKDASMTCALCRMIDWLSWPLAQHVETWVTALLKGLAS
VQKFTILIDVTLLKIEQVFHRLWYPIVRPGALAVLSHMLLSFQHSPEAFHLIVPHIIKLV
QFLKEEAMPSSKIFLMQLTELVHCMMYQYSGFPDLYEPILEVIKDLPKPSEEKMKLTLNQ
SAWTSHSNSLASCLSRLSGKSETGKTGLINLGNTCYMNSIIQALFMATDFRRSVLSLSLN
GSRSIMKKLQLLFAFLAHTQRAAYAPQSFFEASRPPWFTPGSQQDCSEYLRFLLDRIHEE
EKTCRILHRENTPQSSAATSGHEDGPTPHNRPTEKLCVSNSNPCSDNRGKTLIEKMFGGK
LQTTICCLNCKSTSQKQEAFTDLSLAFPPCLDQVLEAGSAQPLTAPGSENPEPPCQAVVV
PAAETLPGRQGSGGGQGPEVLCEELPLQPVGSADCPRAPNDKLVPVSGEGAVNRSHQTMS
VPRLINYFLAPEILNGENKYYCETCGSLQNAQKELQVVDEPEYLILTLLRFSYDAKSHIR
RKILDDVVLPLVLQLPVDKPPVPTSPGENQLVVSDSTENVPKKLKSSDSVNSSDPHRVPY
LLSSIVVHSGMSSESGHYYCYARNTASGPAGQLCCQGDLRGLSSPSPGCTAHTEPSTSVI
WQDANCRETAKEWFLFNDSRVTFTSFQSVQNVTSRFPKDTAYVLFYRKQDAGHGVLPSAI
NGVWVNGEPPLQKELMDAITKDNKLYLQEQELSARTRALQASSTTCSFRPHGFDDNDPPG
SCGPSGGGGGGGGFNTISRLVF
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgatggataagatattggaagccctcatcacctcttctcatcccttgcctgtgaagaaa
gggattgtgaagaaagtggtggaggcagctgagaattctgttgatcgggagcaatgcaag
gccatgttcgacctgaccacccgcttgattttgctgggggaagacggattccaaaaacaa
gtgggtcaccaagtgctcgaagcctacgccagataccaccgttcagaatttgaagagttc
ttcaacaaaggatttgtcctgaccctccttcagcaaggatacaaatctttagataagaag
gatattgtcatcattgattatattcacatgggattgaagttaataatgagttgcccctcc
gtgctagaaatttttggcttcatgcatactgaggttttgcgaatagtctgtgaaagacct
gaacctttgctgtgtgccaggctgagtgagttgctgtctgattttgtacactgtatccca
aggggtaaatctgcggtggtgttttgccaacagctggtcaggactatcagccaattccag
tgcactgcaatacaggaggaagagattcgggcatttatttctcaggtgaataaagtaggc
agtttgctgcaaagtatttggaaatctgagccagccgcacttctaccttctctgcaagag
gtttttgtcattatttctgctactgattactctttcgaaccatctatcgccctagcaagc
cttgttcagcacatcccattgcaaatgatcgcagttctcattcggagtctgatcacagac
caaaacgttaaagatgccagtatgacttgtgctctctgcaggatgattgactggctgtcc
tggccattggctcagcatgtagagacctgggtgactgcactgctgaagggactggcttct
gtccagaagttcactatcctcatagatgtcacgctgcttaaaattgaacaggtatttcat
cgtctctggtacccaatagtgagacctggtgctttagctgtcctgtctcacatgctgctc
agctttcagcattctccagaagcctttcacctgattgttcctcacataatcaagctggtc
cagttcctgaaagaagaagctatgccttcaagtaaaatcttcctgatgcagttgactgag
ctggtacattgtatgatgtaccagtattctggcttccctgatctctatgaacctattctt
gaggtcatcaaggatttgccaaaacccagtgaagagaagatgaagctcactctgaatcaa
agtgcctggacatcacactccaattccctggcttcctgtttgtccaggctttctggaaaa
tctgaaacgggaaaaactggcttaataaatctgggtaacacatgctacatgaacagcatc
atccaggcattatttatggctaccgatttcagaaggtctgttttatcactgagtctaaat
ggatcccgctccataatgaaaaaacttcaacttctgtttgccttcttggcccacactcag
agagcagcatatgcccctcaaagcttctttgaagcatcgagaccaccatggttcacccct
ggctcccagcaggactgttctgaatacctcaggttccttttagacagaatacatgaagaa
gagaagacgtgtagaattcttcatcgggagaacacgccccaaagcagcgctgccacctcc
gggcacgaagacggacccactccgcacaatcgccccacggagaagctctgtgtttccaat
tcaaacccgtgctcggacaaccggggcaagactctgatcgagaagatgttcggggggaaa
ctgcagaccactatctgttgcctgaactgcaagagcacctctcagaagcaggaagctttc
actgacctctcgttggccttccctccctgcctggaccaggtgctagaggccgggtccgcc
caaccgctgaccgcaccgggcagcgagaacccggagccaccctgccaggctgtggtggtg
ccggctgctgagaccttgcctggccgccaggggagtggtggggggcaggggcccgaggtt
ctctgcgaggagctcccactccagcccgtgggctccgcggattgcccgcgagcacccaat
gacaaattggtcccagtttccggtgagggcgctgtgaacaggagtcaccaaaccatgtct
gtccccaggctgatcaactacttcctggcccccgagatcctgaacggggagaacaagtat
tactgtgagacgtgcggttcgctgcagaacgcccagaaggagctgcaggtggtggacgag
cccgagtacctgatcctcacgctgctccggttctcctacgacgccaagagtcacatcagg
cggaagatcctggacgacgtggtgctcccactagtgctgcagctgccggtggacaagccg
cctgtgcccacctcaccgggcgagaaccagttggtggtctccgactccactgagaatgtg
cccaagaagctcaagtcttcggactcagtgaactccagcgatccgcaccgtgtgccctac
ctcctctcctccatcgtggtccactccggaatgtcctccgagagcgggcactactactgc
tacgccaggaacaccgcctcgggccctgcaggccagctgtgctgccagggagacctccga
ggcctgtcctccccgtcgccgggctgcacggcccacacagagcccagcacctcagtcata
tggcaggacgcaaactgcagggagacggcaaaggagtggtttctgttcaacgatagcaga
gtgaccttcacttccttccagtccgttcagaacgtaaccagcaggttccccaaggacacg
gcatacgtcttgttctaccggaagcaggatgccggtcacggagtgctcccgagcgcaata
aatggagtgtgggtgaatggggagcccccgctgcagaaggagctcatggacgcaatcacg
aaagacaacaagctttaccttcaggaacaagagcttagtgccaggaccagggccctgcaa
gcctcttctaccacttgttcctttcgtcctcatggttttgatgacaacgacccaccaggc
agctgtggccccagtggtggcggaggaggaggcggtgggtttaataccatcagccggctt
gtcttctga
DBGET
integrated database retrieval system
