Callorhinchus milii (elephant shark): 103181426
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Entry
103181426 CDS
T03088
Symbol
ybx1
Name
(RefSeq) Y-box-binding protein 1
KO
K09276
Y-box-binding protein 1
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmk03000
]
103181426 (ybx1)
03019 Messenger RNA biogenesis [BR:
cmk03019
]
103181426 (ybx1)
03041 Spliceosome [BR:
cmk03041
]
103181426 (ybx1)
Transcription factors [BR:
cmk03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
103181426 (ybx1)
Messenger RNA biogenesis [BR:
cmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
103181426 (ybx1)
mRNA cycle factors
Common to processing body (P body) and stress granule
103181426 (ybx1)
Spliceosome [BR:
cmk03041
]
Common components
Common spliceosomal components
General mRNP proteins
103181426 (ybx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
103181426
NCBI-ProteinID:
NP_001279438
UniProt:
K4GIE8
LinkDB
All DBs
AA seq
334 aa
AA seq
DB search
MSEAETEQQPKQQEQSPPPPPQPQQQPQQQQQQQQPEKPKSPGEKKVIATKVLGTVKWFN
VRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTG
PGGVPVQGSRYAADRNRYRRYNPRRRGPPRNDQQNIEGGEKGDGAETATDGQTQEYQNQQ
QRPPYRRQRYPPYFVRRRYGRRPQYANQPPQGEVTEGGEVNENQVAGEDGGKPSRGQNRF
RGYRPRYRSFNESVHYRGPPRPRPPREGSSEEDKENQGDGQQDQQTHPRRFRRNYNYRRR
RPQNPKPKDGEESKAPETPAENISAPETEQGNAE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggccgagacagaacagcaacccaaacagcaggagcagtcgccgccgccgccg
ccgcagccacaacaacagccgcagcagcagcagcagcagcaacagccagagaaacccaag
tcccccggggagaagaaagtcatcgcaacaaaggtccttggaacagtaaagtggttcaat
gtacgaaatggctatggattcatcaaccggaatgacacgaaagaggacgtatttgtacat
cagactgccataaagaagaataatccacggaaatatctaagaagtgttggtgacggtgaa
acagtggagtttgatgtcgtggaaggtgaaaagggagcagaggcggccaacgtgaccggt
cccggtggagttcctgttcaaggaagccgatatgctgcggatcgaaatcgttaccgtcgt
tacaaccctcgacgtcgaggaccaccgcggaatgaccaacagaacattgaaggtggagag
aaaggagatggagcggagactgcaactgacggacagacccaggaatatcaaaaccaacag
caacgccctccgtacagaagacagcgttacccaccttactttgttcgacgtcggtatggt
cgtcgcccacaatacgccaaccagcctccccagggagaagttactgagggtggtgaagta
aacgaaaaccaagttgctggggaagacggtggtaaaccaagccgaggacaaaatcgcttt
aggggctatcgcccacggtaccgcagcttcaacgaatcggttcattacagaggaccccct
cgcccacgtccaccccgggagggaagtagtgaggaagacaaagagaaccaaggtgacggc
caacaagaccagcagactcaccccagacgatttcgccgcaactacaactacaggcgtcgt
cgcccacaaaaccctaaacccaaagatggcgaggagagcaaggcacccgaaacaccagct
gagaacatttctgctccggagaccgagcagggcaatgctgagtaa
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