Callorhinchus milii (elephant shark): 103181533
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Entry
103181533 CDS
T03088
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03250
Viral life cycle - HIV-1
cmk03272
Virion - Hepatitis viruses
cmk04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103181533
03272 Virion - Hepatitis viruses
103181533
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103181533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmk04131
]
103181533
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmk04147
]
103181533
Membrane trafficking [BR:
cmk04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
103181533
Exosome [BR:
cmk04147
]
Exosomal proteins
Proteins found in most exosomes
103181533
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
AAT
SLATT_4
Motif
Other DBs
NCBI-GeneID:
103181533
NCBI-ProteinID:
XP_007896272
LinkDB
All DBs
Position
Unknown
AA seq
874 aa
AA seq
DB search
MATGFVSVPLKKSSEVDFAKPLSKFIASTNPSGEAQSEYIRAAEELSKLRKSAVGRPLDK
HDSSLEILLRYYDQLCAIEPKFPFSENQICITFTWKDAFDKGSLFGGSVKLALCSLGYEK
SCVLFNAGALASQIAAEQNLENDEGLKAAAKYYQFSSGAFQQIKDTVLSALNREPTMDIS
PDTVGTLSLIMLAQAQEVFFLKATADKMKDAIIAKLANQAADYYGDAYKQCQYKENLPKY
FYFQEVLPILAAKHCIMQANAAYHQSVLTKQQKKFGEEIARLQHATELIKTVASRYDEYI
NVKDLSDKISRALTAAKKDNDFIYHDRVPDLKDLTPIGKATLVKPTPVNVPLSQKFTDLF
EKMVPLAVQQALSMYNQRKADLVNRVIGQMREANNLANGVLASLNLPAALEDVSGHSIPQ
SILEKSKAVIQQGGLETVDQLIKDLPELLQRNREILLESMKILDEEESSDNDLRAKFQQR
WQRTPSNELYKSLRTEGGNFRNFLDKAGQADNVVRERYSTHRDAIALLCHPENELNAAIP
SGNPANSLQGTEVITILKSLLASLDETKKERETLENDIKLQQFDMSSAFLTALAQDGAIN
EEVISVTELDRIYGTYTQKVQKNLKSQEELLSSIQMNHEEFSKSKQSNAEADSREEMLKK
LAAAHDQYIELVANLKEGTKFYNELTEILLKLQNKCTDIVFARKTERDELLKDLQLSIAK
QPSAPNIPAVPAYQTSNTMTGGTTTPVPTPAPRTVFQPKPTPPARPPPPVVPSTVAAPYS
ASAPGPSTAPPAVGPSVMPTQAQGPPYPTYQGYPGFYQMPMAYNPYAYSQYGMPVMFQPP
GQQPYQGPQPPQQPGYPHPQLPGYPQPQQPYYQQ
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgggttcgtgtcggtgccgctcaagaagtcctcggaggtggacttcgccaaa
ccgctctccaagttcatcgccagcaccaacccgagcggcgaggcccagtccgagtacatc
agggcggccgaggagctcagcaaactgcgcaagagcgccgtgggcaggccgctcgacaag
cacgacagctccctggaaatcctgctcaggtattatgatcagctatgtgctattgagccg
aagtttccattctcagaaaaccagatttgtataacttttacctggaaagatgcatttgac
aaaggatctttgtttggaggatctgttaagcttgccctttgtagtttgggatatgaaaag
agctgtgtgctgttcaatgctggagcacttgctagccagattgcagcagaacagaatctg
gagaatgatgaaggattgaaggcggcagctaaatattatcagttcagtagtggagcattt
caacagatcaaggataccgtgttgtcagcattgaatcgggagcccactatggacatctct
ccagatacagtcggcaccctcagtctgataatgctggctcaagcacaggaagtgtttttc
cttaaagcaactgctgataaaatgaaagatgcaataatagctaaactagctaatcaagct
gcagattactatggtgatgcctacaaacaatgccagtataaggaaaatctacccaagtat
ttttatttccaggaagtgctgcctattcttgctgcaaaacattgcatcatgcaggccaac
gcagcgtaccatcagtcagttctgacaaagcaacagaagaaatttggtgaggaaattgca
agattacagcatgcaaccgaattgataaagactgtagcttctcgctacgatgagtatatc
aatgtgaaggatctgtctgacaaaatctctcgagcattgacagctgcaaagaaagacaat
gatttcatttaccatgatcgtgttcctgacctgaaagatttgactccaattggcaaggcc
acactggtgaagcctactccagtcaatgtgcccttgagtcagaaattcactgatctgttt
gagaagatggttcctttggcagtgcaacaagctctgagtatgtacaatcagagaaaggct
gacttggtgaacagagtcattggacagatgagagaagccaataacctggccaatggtgtt
ctggcctccttgaacctacctgctgcgctcgaagatgtttctgggcacagtattcctcag
tccattctggagaaatccaaagctgtcattcagcagggtggcctggagacagtagaccag
ttgataaaagaccttccagaacttctgcagcgaaatcgggagattttgttggagtcaatg
aaaatactggatgaagaggaatcttcagataatgaccttagagcgaaatttcagcaacgc
tggcagaggacaccttcaaatgagctgtataaatctctgcgaacagagggaggaaatttc
agaaactttctggacaaagctggacaagcagataatgtggtccgagagcgttattccact
catcgtgatgctattgcccttctctgtcatcctgaaaatgagttaaatgctgccatacca
tctggcaatcctgcaaactccctacaagggactgaggttattacaatcctgaagtcactt
cttgcttctttggatgaaacaaagaaggaaagggaaactttagagaatgatatcaagcta
cagcagtttgacatgtccagtgcctttttgactgcattggctcaggatggggctattaat
gaagaggttatctcagtgactgaacttgatcgaatttatggaacttatactcagaaagtg
caaaaaaatctgaaaagccaggaggagttgctatcaagtattcagatgaatcatgaagaa
ttttccaagtcaaagcagtccaatgcagaagctgattcacgggaagaaatgcttaagaaa
ttagcagcggcccatgatcagtatattgagcttgttgctaatttgaaagaaggaacaaaa
ttctacaatgagctgacagaaatccttctgaaattacaaaacaaatgtacagacattgtg
tttgctcgtaaaactgaaagggatgaactgctaaaggatttgcagctgagcatagcgaag
caacctagtgctccgaatatcccagcagtgcctgcataccaaactagcaataccatgact
ggaggaactacaacacctgtgcccactccagcacccagaacggtatttcaacccaaacct
acacctcctgctcgcccaccccctcctgttgtcccttcaactgtagctgcaccttattct
gcttctgccccaggacccagtactgcacctccagctgttgggccctctgttatgccaaca
caggctcaaggacctccataccccacatatcaaggctatcctgggttttaccaaatgccg
atggcgtacaatccatacgcttatagtcagtacggtatgccagtcatgttccagccgcct
ggacaacaaccttaccaaggaccacagccacctcagcagccaggataccctcatcctcag
ctgccaggataccctcagcctcagcagccttattaccagcaatga
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