Callorhinchus milii (elephant shark): 103181593
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Entry
103181593 CDS
T03088
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03020
RNA polymerase
cmk04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103181593 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
103181593 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmk03021
]
103181593 (polr3a)
Enzymes [BR:
cmk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103181593 (polr3a)
Transcription machinery [BR:
cmk03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
103181593 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF3654
Motif
Other DBs
NCBI-GeneID:
103181593
NCBI-ProteinID:
XP_042192561
LinkDB
All DBs
Position
Unknown
AA seq
1402 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDNSHTPLSFGVLDHRM
GTSEKDRPCETCGKNLADCIGHYGYIDLELPCFHVGYFKAIIGILQMICKTCSHIMLSQE
EKKQFFDALKRPGLTYLQKRSLKKKISEKCRKRTICLFCGTFNGPVKKCGLLKIIHEKYK
TNKKVMDPVVSDFLQSFDIAIEHNKEVEALLGRAQENLSPLIVLNIFKRIPSEDVPLLLM
NLDAGKPADLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMSG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSSRTVISPDPNLRIDEVAVPVHVGKILTYPERVTKANLDFMRKLVRNGPEVHPGANF
IQQRHTNLKRFLRYGNREKMAQELKYGDIVERHLIDGDIVLFNRQPSLHKLSIMAHIAKV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKTCQIVASILSGEDERLKITLPHPAILKPVTLWTGKQI
FSVILKPNKECPINANLRTKGKQYCGKGEDLCHNDSFVVIQNSELMCGCLDKGTLGSGSK
NNIFYILLRDWGQMAAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKQELLDAG
YKKCDEYIEALKTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLTM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFKKHSKLPAAKGFVADSFYS
GLTPTEFIFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCTQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAIFPCRKEPALSKSDLVLSAEAMMKRNDFLC
CQDEYLQTLTGTGCENFSEAIRNFVKAVSEKIKKMRDKYGINDNGTTEPRVLYQLDRITP
TQVEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVP
RIKEIINASKSISTPIITAHLDQDDDADFARLVKGRIEKTLLGEISEYVEEVFLPDDCFI
LIKLSLERIRLLRLEVNAETVRYSICTSKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYV
LQYLKEDLPKIVVQGIPEVSRAVIHIDTQGGKQKYKLLVEGDNLRAVMATHGVKGIRTTS
NNTYEVEKTLGIEAARSTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGL
AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADK
DPDPPKRPLIFDNSEFHIPLVT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttcagggagacggatgtggccaaaaaaataagccacatctgtttt
gggatgaagtctgcagagcagatgaggcagcaagcacacatccaagtagtaagcaagaac
ctctacagtcaggataatagtcatacccctttatcctttggtgtattggaccatcgcatg
ggaaccagtgagaaagatcgtccatgtgaaacatgtgggaagaatctggctgactgcatt
ggacattatggttacattgatttggagctgccttgtttccatgttggctattttaaagcc
attattggaatcttacagatgatctgtaaaacgtgttcccacatcatgttgtcccaggag
gaaaagaagcagttttttgatgctttgaaaaggcctggcttaacctaccttcagaaacga
agcctgaaaaagaaaatctctgagaaatgtaggaaacgaaccatctgtctgttctgtgga
acatttaatggtcctgtgaaaaaatgtggcttgctgaagattattcatgaaaaatacaag
acgaataagaaagtgatggaccctgtggtgtcagattttctgcagtcttttgatatagca
atagaacacaacaaggaagtggaggcattgcttggaagagcccaggaaaatctcagtcct
ctgatagtgttgaacatatttaaaagaattccttcggaagatgtccccctacttctgatg
aaccttgacgcagggaaacctgcagatctgatccttacgcggttattagttcctcctctc
tgtatcagaccttcagtagtcagcgacctaaagtctgggaccaacgaagatgatctgacc
atgaaactgactgaaataatcttcctgaatgatgtcattaaaaagcatagaatgtctggg
gcaaagactcaaatgatcatggaggactgggacttcctgcaattacagtgcgcactttac
atcaacagtgagctttctggcattcctctcaacatggcacccaagaagtggaccaggggc
tttgtacagaggttaaagggaaaacagggtcgatttcgaggaaacctgtctggaaaaaga
gtagacttttccagcagaactgtcatctctcctgaccccaatctacggattgatgaagtt
gcagttccggtccatgtgggaaagatccttacatacccagagagggttaccaaagccaac
ctggattttatgcgcaaacttgtccgtaatgggcctgaagtgcacccaggagccaatttc
atccaacagcgacacacaaacctgaagaggtttctaagatacggaaatagggaaaagatg
gctcaggaactgaagtatggcgacattgtggagcggcacctgattgatggagatatagta
ttgttcaacagacagccatccttacacaaactgagtatcatggcacatatagccaaagta
aaacctcaccgaacattcaggttcaatgaatgtgtttgcaccccatacaatgcagatttt
gatggtgatgaaatgaatcttcaccttcctcaaactgaggaggccaaggctgaagcactt
gttctgatggggacaaaagccaacttggtaacccctagaaatggggagcccttaatagct
gctatccaggactttctcacaggtgcctatctgcttaccctgaaagacactttctttgac
agagcaaagacttgtcagattgttgcgtccattctttcaggagaagatgagagactcaaa
attactcttccacatcctgcaatcttaaagcctgtcacactgtggacaggaaagcagatt
tttagcgtcattctcaaacccaacaaagagtgtcctattaatgcaaaccttcgcacaaag
ggaaagcagtactgtgggaaaggagaggatctgtgccacaatgactcctttgttgtaatc
cagaacagtgagctgatgtgtgggtgcttggataaaggaacactgggctccggctccaag
aacaacatcttctatatcctgttgagagactgggggcagatggcggctgcagatgcaatg
tcacgcctggctcgactggctcctgtctacctctccaatcgaggattctccattgggatt
ggtgacgtaacgccaggccagggattgctgaaggccaaacaagaactattggatgctggc
tataaaaagtgtgatgaatacattgaagcactcaaaactggtaaactccagcaacagcct
ggatgtacagcagaggaaacactggaggccttgatccttaaagagctatctgtaattaga
gaccatgctggcagcgcgtgcctcagggaactggacaagagcaacagccctctcacgatg
gccctctgtgggtcaaaaggttcctttatcaacatctcccagatgattgcctgtgtagga
cagcaggccatcagtggatcccgggttcctgatggttttgagaacagatctttaccccat
ttcaaaaaacattccaagctcccagcagcaaagggctttgtcgcagacagtttctattct
gggttgactccaactgagttcatctttcacaccatggctggtcgtgagggcttggtcgat
acagctgtaaagacagcagaaactggatacatgcagagacgtctagtaaaatcgctggag
gatctgtgtacacaatatgatttaactgtccgcagctcaactggtgacatcatccagttt
atctatgggggagatggcttagatccagcagccatggaaggcaaagatgaacctttagaa
tttaagcgggttctggataacatccgagccattttcccatgccgcaaggagccagctctg
agtaaaagtgatttggttttaagtgccgaggccatgatgaagagaaacgattttctatgc
tgccaagatgagtacctgcagactttaactgggacaggctgtgagaacttcagtgaggca
atcagaaattttgtgaaagctgtttcagaaaagatcaagaagatgagagacaaatatggt
attaatgacaatgggactactgagccccgagtgctatatcagctggatcgaataactcct
acccaagtggaaaagtttctcgagacctgcagagacaaatatatgagagcccagatggag
ccaggttctgctgttggtgctttgtgtgcacagagtataggagaaccaggcacacagatg
accttgaagacgttccactttgctggtgtagcctccatgaacattactcttggtgtaccc
aggataaaagaaattattaatgcatcaaaatctataagcaccccaataattacagcacat
cttgatcaagatgatgatgctgactttgcccgactggtaaagggaaggatcgaaaagacc
ctccttggagagatttcagagtatgttgaagaagtttttctgcctgatgactgcttcatt
ctcatcaagctttccttggaaagaattagacttctaagattggaggtaaatgcagagact
gtgagatactccatctgtacatcaaaactacgagtgaagccaggagatgttgcagttcat
ggtgaagcagttgtatgcgtcacacctcgagagaacagtaaaagttcaatgtattatgtt
ctccagtatctaaaagaggacttgcctaagattgttgttcaaggaatcccagaagtgtcg
agagcagttattcatattgacactcaaggtggaaagcagaaatacaagttgttggtggaa
ggtgacaatttgcgtgctgttatggcaactcatggcgtgaagggaatacgcacaacctca
aacaatacttacgaggtagaaaagacattggggattgaagctgctcgatctaccatcatc
aatgagatccagtacacaatggttaaccacggcatgagcattgaccgaagacatgttatg
cttttatcagacctgatgacctacaagggtgaagtgttgggaataacccgatttggtttg
gcgaaaatgaaagaaagtgttctcatgttggcctcattcgagaaaactgcagatcatctc
tttgatgcagcatactttggacaaaaggactcggtctgtggtgtgtcagagtgcatcatc
atggggatacctatgaacattggaacaggccttttcaaactacttcacaaagctgacaag
gatccagatccacccaaaagacctctaatattcgacaatagtgaatttcatatcccatta
gtcacgtag
DBGET
integrated database retrieval system
