Callorhinchus milii (elephant shark): 103181796
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Entry
103181796 CDS
T03088
Symbol
kcnma1a
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1a
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
103181796 (kcnma1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cmk04040
]
103181796 (kcnma1a)
Ion channels [BR:
cmk04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
103181796 (kcnma1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
103181796
NCBI-ProteinID:
XP_007896679
LinkDB
All DBs
Position
Unknown
AA seq
1187 aa
AA seq
DB search
MLAMADGNASSSGESALAVRFFNMDPVIIPFDPDALCESKEQRMWWAFLASSMVTFFGGL
FIILLWRTFNYLWTVCCHCNPKNKADANSKNLEEKEELPVAEVGWMTSVKDWAGVMISAQ
TLTGRVLVVLVFALSIGALVIYFIDSSDPIESCQDFYKDFTLQIDMAFNVFFLLYFGLRF
IAANDKLWFWLEVNSVVDFFTVPPVFVSVYLSRSWLGLRFLRALRLIQFSEILQFLNILK
TSNSIKLVNLISIFISTWLTAAGFIHLVENSGDPWENFQNSQPLTYWECVYLLMVTMSTV
GYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVSGRKHIVVC
GHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNP
HDLARVKIESADACLILTNKYCGDPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAH
LLNIPSWNWKEGDDAICLAELKLGFIAQSCLAPGLSTMLANLFSMRSYIKIEEDTWQKYY
LEGVANEMYTEYLSGAFVGLSFPAVCELCYVKLKLLLIAIEYKSDKRESSILINPGNNVK
IQEGTLGFFIASDAKEVKRAFFYCKACHDDITDPKRIKKCGCKRLIYSKISIYKRMKLAC
CFDCGGCERDCACMSGSVHSNMDTLERTFPLSSVSVNDCSTSLRAFAVEDEHPSALSPKK
KQRNGGMRNSPNGSPKLMRHDPLLIPGNDQIEEMDANVKKYDSTGMFHWCLPKDIEKVIL
TRSEAAMTVLSGHVVVCIFGDSKSALVGLRNLVMPLRASNFHYHELKHIVFVGALEYLKR
EWETLHNFPKVTIVAGTPLSRADLRAVNINLCDMCVILSANQNNIDDTSLQDKECILASL
NIKSMQFDDSIGVLQANSQGFTPPGMDRASPDNSPVHGIVRQTSITTGANIPIITELVND
SNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGA
TPELEGLLAEENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALK
TYNMLCFGIYRLRDAHMCTPSPCIKRYVITNPPYEFEMVPTDLIFCLMQFDHNAGQSRVS
LSHSSHSSHSSSKKSSSVHSTLPSGNRPSRTKSRESREKQKKEMVYR
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgttagctatggccgatggaaacgcgtcgtcaagcggtgaatctgctctggccgtgcgc
ttcttcaacatggaccccgtcattattcccttcgaccccgacgcgctctgcgagagcaaa
gagcagcgcatgtggtgggctttcctcgcctcttccatggtcaccttcttcggggggctc
ttcatcatcctcctctggaggaccttcaattacctgtggaccgtctgctgccactgcaac
cccaagaacaaggctgatgccaactccaaaaacctggaagagaaggaagagctccctgta
gcagaagtgggctggatgacttctgtgaaggactgggcaggtgttatgatatctgcccaa
acactgactggccgagttcttgtggtcttagtctttgctctcagcattggtgcacttgta
atatacttcatagattcttcagacccaatagaatcctgtcaggatttctacaaagatttc
acattgcaaattgacatggcattcaacgtattcttcctgctctactttggacttcggttt
attgcagcgaatgataaactatggttctggttggaagtgaattccgtggtagatttcttc
acagtccctcctgtgtttgtgtctgtgtatttgagcagaagttggctgggcttacgattt
ttaagagctctgaggctgatacaattttcagaaattttacagtttctgaatattctaaaa
acaagcaattctatcaagctcgtgaatctgatctccatatttataagcacatggctaact
gcagctggattcatacatttggtggagaactcaggggacccttgggaaaacttccaaaat
tcccaaccgctgacatattgggaatgtgtctatttgctcatggttacaatgtccacagtt
ggttacggtgacgtttatgcaaagaccacccttggacgcctgttcatggtcttcttcatc
ctcgggggtttggccatgtttgcaagctacgtccctgaaatcatagaattaataggaaac
cgcaagaaatatggtggttcttatagtgcggttagtggaagaaagcacatagtggtctgt
ggacacattacacttgagagcgtctccaactttctaaaggacttcctgcacaaggacagg
gatgatgtaaacgtggaaatcgtcttcctgcataatatttcccctaaccttgagctggaa
gctcttttcaagagacatttcactcaggtggagttttatcaagggtctgtgctcaaccct
catgatttagccagagtgaagatagagtcagcagatgcttgtcttattctgactaataaa
tactgtggagatcctgatgcagaggatgcctctaacatcatgagggtaatatccatcaaa
aactatcatccaaagataagaatcattacgcagatgttacagtatcacaacaaggcccat
ctgttgaacattcccagctggaactggaaggaaggggatgatgcaatctgccttgctgaa
ctgaagctgggttttatagctcaaagctgcctggctccaggcctctctacaatgctggcc
aacctcttctccatgaggtcgtatatcaagattgaagaggatacctggcagaagtactac
cttgaaggggtcgcaaatgagatgtacacagagtatctgtccggtgcctttgtaggcttg
tcttttcctgcagtttgtgaattgtgttacgtgaagctgaagctgctgctgatagccata
gagtacaagtcagacaaaagggagagcagcatattaatcaatcctgggaacaacgtcaag
attcaagaaggcacgttgggatttttcattgcaagtgatgccaaagaagtaaaaagggca
ttcttctactgcaaagcgtgtcacgatgacatcacagatcccaaaaggattaaaaagtgt
ggctgcaaacggctgatctattccaagatctccatctacaagagaatgaaactcgcatgt
tgttttgattgcggaggctgtgagcgtgactgcgcttgcatgtcaggcagtgtacatagt
aacatggacacccttgagagaaccttcccactttcttctgtctctgttaatgattgctcc
accagtttacgtgcctttgcagttgaagatgaacatccatcagcattgtcacccaaaaaa
aagcagcgcaacggaggcatgcgaaattcacccaacggttcgcccaaattgatgaggcac
gaccccttgttaattccgggaaatgaccagattgaagagatggacgctaatgtgaagaaa
tacgattccaccgggatgtttcactggtgcctgccgaaggacatcgaaaaggtcattctg
acccgaagtgaagctgccatgacggtgttaagcggacacgtggtggtgtgtatatttggg
gactcaaagtctgccctggtgggcttacggaatttagtaatgcctttacgggccagcaat
tttcattatcatgaactgaagcacattgtatttgtgggcgcactggaatacctgaaacga
gaatgggaaacacttcacaacttccctaaggtgacgatagttgcgggtacaccattaagc
cgagctgatttaagggctgtcaacatcaacctctgcgacatgtgcgttatactatcggcc
aatcagaacaatattgacgatacttcgctgcaggacaaagaatgcatcttggcgtcactc
aacatcaaatctatgcagtttgatgacagcataggggtcttgcaggctaattcccaaggg
ttcacacccccagggatggatcgagcatctcctgacaacagtcctgtccatggtattgtc
cgacagacctccatcaccacaggggccaacatcccgatcatcactgagctagtgaatgac
tccaatgttcagttcttggaccaagatgacgatgatgacccagacacggagctgtacctg
acgcagccatttgcatgcgggacggcgtttgccgtcagtgtgttggactcgctgatgagc
gctacgtacttcaacgacaatatcctgactctgatacgcactttagtgactgggggagcc
actccggaattggaagggcttctggctgaagagaacgcgctgcgaggcggttacagtact
ccgcaaacactggccaacagggaccgatgtcgcgttgcacagttggctttatacgacggc
cccttcgcagacctcggggatggaggctgctatggagatctgttctgtaaagccttaaaa
acgtacaacatgctttgctttgggatttaccgattacgggatgcacacatgtgtacgccg
agcccgtgtattaagaggtatgtgattacgaacccaccgtacgaattcgagatggtgccc
acggatctgatcttctgcctgatgcaatttgaccacaacgcaggccagtctcgtgtcagc
ttgtctcactcgtcgcattcctcacactcttccagtaagaagagctcgtcggtgcactcc
acattgccctcgggcaaccgacccagccgcaccaagagcagggagtcccgggaaaagcag
aaaaaagaaatggtttacagatga
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