Callorhinchus milii (elephant shark): 103181800
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Entry
103181800 CDS
T03088
Symbol
dcp1b
Name
(RefSeq) mRNA-decapping enzyme 1B
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103181800 (dcp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmk03019
]
103181800 (dcp1b)
Messenger RNA biogenesis [BR:
cmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103181800 (dcp1b)
mRNA degradation factors
5'-3' decay
Decapping complex
103181800 (dcp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
103181800
NCBI-ProteinID:
XP_042191357
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
MAAARGGGGGWGSVWRRGGWGSVWRRGAGAGLGVSLAARGGGRGLGVSLAARGLGISLAA
LQRRDPYICNIVDVASQVALYTFSHKANEWEKTDVEGTLFVYTRSASPRHGFTIMNRLSV
ENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKAECQRIAELMKNLTHLEQWKAQQ
GGGSPHYGESKAVDILQMLSKAEHEYNKVKHSSEPKQITSSSLIHNSSVLIKPIPIKPTE
LGTDAHYQEAQRSDKSTELGTKHLTLAALFGTQVKPISTNVPAQEPKNKVCSRPGVVRSL
SYDEPSRLPKQETSQLEERQLCPAIQKLMGRGTDLQPVSELPENCLCENQIDQPMEDSLT
GLYQVQPSVGNVSTQNPLNESSSFFPNNTHKLLQKLQCTQAPLLTPGPSVIQSELLLSRS
QKDSQIQSFPQTHPTYLSSSLQFQPNLHNIQSVDQAKMTVASNTCSSPAQVSGIISPHEL
LQKLQIVQQEQQLQAGNKMTMAAKFSAQPSVVSQTNSSIKPLESWTEKTACSEKRNPFFQ
VISPQRIPATVASSLLSPMVFSKSVMGKSKTLEAGPLPFAQLDTTQAPKSLLESRLHQPA
QMAELTSHTSNVLTKVQLQETLLYLLKNDPNFLNIIYEAYLTGQANTAAKKKT
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgcggggcgggggcgggggctgggggtcagtctggcggcgcgggggctgg
gggtcagtctggcggcgcggggcgggggcggggctgggggtcagtctggcggcgcggggc
ggggggcgggggctgggggtcagtctggcggcgcgggggttggggatcagtttggcggcg
ctgcagaggcgcgatccctacatctgcaacatcgtggacgtggcgagtcaggtcgcgctt
tacactttcagtcacaaagccaacgagtgggagaagaccgatgtcgagggcaccctattt
gtttacacaaggtctgcttctccgagacatgggtttaccatcatgaacagactgagcgta
gaaaatagaactgagccaatcactaaggatctggactttcagttgcaagatcctttccta
ctctacagaaatgcacgattgtctatctatgggatctggttctatgataaggcagaatgt
cagaggattgcagagcttatgaaaaatttaactcacttggagcaatggaaagctcagcag
ggtggtggatcaccacactatggtgagagcaaagctgtagatatcttacaaatgctatct
aaagctgaacatgaatataacaaggtcaaacattcctcagaaccaaagcagataactagc
tccagtctgattcataacagctcagtcctgatcaaaccaatcccaattaaaccaactgag
cttgggacagatgcccattatcaagaggcacagcgatcagataagagtacagaattagga
acaaagcacttgacattggcagccttgtttggtacacaagtgaaaccaatttcgactaat
gtcccagcacaggaaccaaagaacaaagtttgtagtcgaccaggtgtggtacgttctttg
tcctatgatgagcccagcagattgccaaagcaggagacttcccaacttgaagaaagacag
ctttgtcctgctattcagaaactaatgggccgtggaactgatcttcagccagtgtctgag
ttaccagaaaattgcctgtgtgaaaatcaaattgatcaacctatggaagactctttgaca
ggactataccaagtacaaccctctgtaggcaatgtatctacacaaaatcctttgaatgaa
tccagttctttctttcctaacaatacacacaaattgcttcagaagctacaatgtacacag
gcaccacttcttaccccaggcccttctgtgatacagtcagaacttctcttaagtaggtct
cagaaggattctcagatacagtcttttcctcagacccatcccacctatcttagctccagc
ctacagtttcaacctaatctacacaatattcaatctgtagaccaggccaagatgactgtg
gcctcaaacacctgcagtagcccagcacaggtctctggtattatatctccacatgaatta
cttcagaagctccaaatagttcaacaggaacagcagcttcaggctgggaacaaaatgact
atggcagctaagttttcagctcagccttcagttgtcagtcagaccaattcctcaatcaaa
ccattggaatcctggacagagaaaactgcctgctcagaaaaacggaacccatttttccag
gtcatatccccacaacgcattccagctacagtggcatcatctcttctgtctcccatggtg
ttctccaagtctgtaatgggaaagtccaagaccctagaagcaggtcctctaccatttgca
cagttggacaccactcaagctccaaagagcctgctagagagtcgtctgcatcaacctgca
cagatggcagaactaactagtcatacatcaaatgtacttaccaaggtccagctacaagaa
acccttttgtaccttttgaagaatgaccctaactttttgaatatcatctatgaagcctat
ctcacaggtcaggcaaacactgcagcaaaaaagaaaacctaa
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