Callorhinchus milii (elephant shark): 103182042
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Entry
103182042 CDS
T03088
Symbol
lsm4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03018
RNA degradation
cmk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103182042 (lsm4)
09123 Folding, sorting and degradation
03018 RNA degradation
103182042 (lsm4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmk03019
]
103182042 (lsm4)
03041 Spliceosome [BR:
cmk03041
]
103182042 (lsm4)
Messenger RNA biogenesis [BR:
cmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103182042 (lsm4)
mRNA degradation factors
5'-3' decay
Lsm complex
103182042 (lsm4)
Spliceosome [BR:
cmk03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
103182042 (lsm4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
103182042
NCBI-ProteinID:
XP_007897083
UniProt:
V9KUY5
LinkDB
All DBs
Position
Unknown
AA seq
141 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWKMPECY
IRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGSIQQQKQQQQKGRGGGAGRGVFGGRGRGM
PGAGRGQQDKKPGKLPSGKKQ
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atgcttccactctcgttactgaagactgctcagaaccatccgatgctcgtcgaattgaag
aatggggagacatacaatggtcacttggtcagttgtgacaattggatgaacattaacctg
cgggaagttatttgtacatcccgggacggggataaattctggaaaatgccagagtgttac
atccgagggagcaccatcaagtacctccgaatcccggatgaaatcatcgacatggtgaaa
gaggaagtggtgtcaaagggcagagggcgcggcagcatccagcaacagaaacagcagcaa
cagaaggggcgcggaggcggagccgggcgaggtgtgttcggtggccgtggtcggggaatg
ccaggcgccggcagaggacagcaagacaagaaacccggaaagctacccagcggcaaaaag
cagtga
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integrated database retrieval system
