Callorhinchus milii (elephant shark): 103182059
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Entry
103182059 CDS
T03088
Name
(RefSeq) cartilage oligomeric matrix protein
KO
K04659
thrombospondin 2/3/4/5
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04145
Phagosome
cmk04510
Focal adhesion
cmk04512
ECM-receptor interaction
cmk04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103182059
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
103182059
09144 Cellular community - eukaryotes
04510 Focal adhesion
103182059
09142 Cell motility
04820 Cytoskeleton in muscle cells
103182059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmk04131
]
103182059
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmk04147
]
103182059
00536 Glycosaminoglycan binding proteins [BR:
cmk00536
]
103182059
Membrane trafficking [BR:
cmk04131
]
Endocytosis
Phagocytosis
Opsonins
103182059
Exosome [BR:
cmk04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103182059
Exosomal proteins of colorectal cancer cells
103182059
Exosomal proteins of bladder cancer cells
103182059
Glycosaminoglycan binding proteins [BR:
cmk00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103182059
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
COMP
EGF_3
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
103182059
NCBI-ProteinID:
XP_007897103
UniProt:
A0A4W3HBR3
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MKQKFFILISALLYHFSSCQFQNSPGDAIARQMLSQMLQTNQELAEIKELLKSQVKEIVF
LKNTVAECDACGLNKEGKHPPITQYPYGGCGSSPCFPGVLCTNSVDGFKCGACPEGFTGN
GTHCTDVDECRMKPCFRRVRCINTSPGFRCEACPSGFTGSRFGGEGETFAQMNKQVCNDI
DECEDGHNGGCDPNSICTNVQGSFRCGACKSGYLGDQTQGCRLKRSCANGAPNPCHINGE
CSIGRDRSIICNCAIGWAGNGYVCGKDTDIDGFPDESQACSERNCQKDNCVMVPNSGQED
ADGDGYGNACDEDADGDGIPNVEDNCVLVPNVGQRNVDQDNFGDACDNCRLTINNNQKDI
DNDGKGDACDSDMDGDGITNILDNCESVPNRAQVDRDNDGVGDACDSCPNIRNPDQLDVD
DDLVGDSCDTNTDSDGDGHQDTRDNCPTVINSSQLDTDSDGLGDECDDDDDDDGIPDNKP
PGPDNCRLVANPGQEDQDNDGTGDACQGDFDDDKVIDVIDMCPENAQITLTDFRVYQTVV
LDPEGEAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTATDDDYAG
FIFGYQDSASFYVVMWKQTEQTYWQANPFRAVAEPGIQLKAVKSKSGPGEQLRNSLWHTG
DTSDQVRLLWKDPRNVGWKDKTSYRWFLQHRPQVGYIRVRFYEGPGIVADSGIIIDTTMR
GGRLGVFCFSQENIIWANLRYRCNDTIPEDFQATQLQYQL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagaaattcttcatattgatttccgctttgctgtaccatttcagctcctgtcag
ttccagaactccccaggagacgcgattgcccgtcagatgctctcccagatgctgcagaca
aaccaggagctggcggagatcaaggagctgctgaagtcacaggtgaaggagatcgtcttc
ctgaagaacacggtggccgagtgcgatgcctgtgggcttaacaaagaggggaagcatccc
ccgatcacccagtatccctacggaggctgtggctccagcccctgcttccctggggtcctg
tgcaccaattcagtcgacggattcaagtgcggagcttgtccggagggttttacggggaat
gggacgcactgcactgatgtggatgagtgccggatgaaaccctgcttcagacgggttcga
tgtataaacacgtccccgggtttccggtgtgaggcgtgtcccagtggcttcaccggctcc
aggtttgggggagagggagagaccttcgcccagatgaacaaacaggtttgtaacgatatt
gatgagtgcgaggacgggcacaacgggggctgtgaccccaactccatctgcaccaacgta
cagggatcattccgttgtggagcgtgtaaatcgggatacctgggagaccagacccagggt
tgccgtctcaagaggagctgtgccaacggagcccccaacccctgccatataaacggcgag
tgcagcatcgggcgtgaccgaagcatcatctgcaactgtgcgatcggctgggccgggaac
ggctacgtgtgcgggaaagatactgacatcgacgggtttcctgacgagtcgcaggcttgc
tcggagcggaactgtcaaaaggataactgtgtgatggtcccgaactccggccaggaggac
gctgacggggatgggtacggaaacgcatgcgacgaggacgctgatggcgacggaatccca
aacgtcgaggataactgtgtgctggtgcccaatgtcggacagcggaacgtggatcaggac
aatttcggggacgcctgcgacaactgccggctgaccatcaacaacaatcagaaggacatc
gacaacgacggcaaaggcgacgcttgtgacagtgacatggacggagacgggatcactaac
attctggacaactgcgagagcgttccgaaccgagcgcaagttgatcgggataatgatgga
gtgggagacgcatgtgacagctgccctaacatcaggaaccctgaccagttggatgttgat
gatgatctcgttggggattcctgtgacaccaacactgacagtgatggggacggacatcag
gacacacgggataactgcccgacggtgattaacagcagccaactggacaccgactccgac
gggctgggggacgagtgcgacgatgatgacgacgacgatggaatccctgacaacaaaccc
cccggtcccgacaactgccgtcttgtcgccaaccccggccaggaggaccaagacaatgac
gggacgggcgacgcgtgccaaggcgactttgacgacgacaaggtgatcgacgtgattgac
atgtgccccgagaacgcccagatcacactgaccgacttcagggtctatcagacggtggtc
ctggaccccgagggcgaggctcagatcgaccccaactgggtggtcctcaaccaggggatg
gagattgttcagacaatgaacagtgacccggggctcgctgtaggctacaccgcctttaac
ggggtggattttgaggggacgtttcatgtgaacacggctacggatgatgactacgcgggg
tttatattcggctaccaggacagcgccagcttctacgtggtgatgtggaaacagacggag
cagacctactggcaggccaaccccttccgggcggtggcggagccgggcattcagctcaag
gcggtgaaatctaagtcggggccgggggagcagctgaggaactcgctgtggcacacggga
gacaccagcgaccaggtccggctcctgtggaaagatcccaggaacgtgggctggaaagac
aagacttcctaccgctggttcctacagcaccggccgcaggtcggctacatcagggttcga
ttttacgagggccccggcatcgtggctgattccggcatcatcatagacaccacgatgcgc
ggggggcgattgggggtcttctgcttttcgcaagaaaacatcatctgggccaatctgcga
tatcgttgcaacgacacaatcccagaagatttccaagcaacacaacttcagtaccagctg
tga
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