Callorhinchus milii (elephant shark): 103182141
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Entry
103182141 CDS
T03088
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03013
Nucleocytoplasmic transport
cmk03015
mRNA surveillance pathway
cmk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103182141
09122 Translation
03013 Nucleocytoplasmic transport
103182141
03015 mRNA surveillance pathway
103182141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmk03019
]
103182141
03041 Spliceosome [BR:
cmk03041
]
103182141
Messenger RNA biogenesis [BR:
cmk03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
103182141
Spliceosome [BR:
cmk03041
]
Common components
Common spliceosomal components
Cap binding complex
103182141
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
DUF3195
NOCA1_mid
FapA
DUF1664
Motif
Other DBs
NCBI-GeneID:
103182141
NCBI-ProteinID:
XP_042192490
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MSRRRHSDDNDGQPHKRRRTSEPIEIEDRLESLICRVGEKSTSSLESNLEGLAGVLEADL
PNYKSKILRILCSVARMLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKEALKNNLY
NEAVFLVRFLCDLVNCHVIAAPSMVAMFENFVNVTQEEDAPQVRCDWYVHTVLCSLPWVG
KELYEKKDVEMDRMLSVIDGYLKGRQKAHMPMLQCWNSAQPHVQEEYLDCLWAQIQKMKK
DRWQEKHILRPYLAFDSVLCEALQHNLPPFTPPPHTEGSVYPVPKIIFRMFDYTDAPEGP
VMPGSHSVERFVIEENLRCIIRSHWKERKNCAAQLLSYPGKNKIPLNYHIVEVVFGELFQ
LPVPPHIEVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDSMNTICIDRFINWFSHHL
SNFQFRWSWDDWSDCLALDPDKPRPKFVREVLEKCMRLSYYQRLVDIVPENFAALLPANP
XCIYKYGDESNSSLPGYQVAVSVCTAIKTKAGIDEIVSFLKDLPNPNQDDDDDEGFSFNP
LKIDVFVQTLLYLASKSFSHSFSALAKFHEVFKVLAEGDDGKLHVLRVMYDVWKCHPQMM
AMLVDKMIRTQIVDCAAVANWIFSSEMSPDFTRMYVWEILHSTIRKMNKHVLKVQKELDE
TKDKLDKQHKRRDSDEDYDNSDEEDGPLEDQIERLQEKVESAQSEQKNLFLVVFQRFIMI
LTEHLARCETGGIDFNTSWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDHHILA
VFQQFCTLQA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaggcggcacagcgacgacaacgacgggcaacctcacaagaggagaaggaca
tcggagccaattgaaatcgaagaccgtctggaatctttgatatgtcgtgttggagaaaag
agcacttcctcattggaaagtaacctggaaggcctggctggagttttagaagctgacctg
ccgaactataaaagtaaaatcctgagaatactttgctccgtagctcgtatgcttcctgaa
aagctaactgtgtacacaacgctggtgggactgctgaatgccagaaactataactttggt
ggagagtttgtcgaagccatgattaggcaactcaaggaagctttgaaaaataatttgtat
aatgaggcagtgtttcttgtccgttttttgtgtgatctcgttaattgccatgttattgcc
gctccttcaatggtggcaatgtttgaaaactttgtcaatgtaactcaggaagaagatgcg
ccacaggtacgttgtgattggtatgtgcacactgtgctctgttctctgccctgggttgga
aaagagctctatgagaaaaaggatgtcgagatggatcgaatgttatctgtgattgatggt
tatctgaagggacgtcaaaaagctcacatgcctatgctgcaatgttggaacagtgcacag
cctcatgtgcaagaagagtacttggactgtctgtgggcacagatacagaagatgaaaaag
gatcgttggcaggagaaacatatcttgagaccatacttggcctttgacagtgtactgtgt
gaggccttgcagcataacttgccaccttttacgccacctcctcatacagaaggctccgtg
taccctgtaccaaaaattattttcagaatgtttgactacacagatgctcctgaaggtcca
gttatgcctggcagtcactctgttgagagatttgtaattgaggaaaatctgcgctgtatc
atcagatctcattggaaggaaagaaaaaactgtgctgcacaattactcagctatcctgga
aagaacaagattcctctgaattatcacatagtggaggttgtctttggagagctcttccaa
ttgcctgtacctccacacattgaagtcatgtacacaacactgttgattgaactctgtaaa
ctgcaacctggctctttgcctcaagtgcttgcacaagccacggagatgttatatatgcgt
ttggattctatgaacacaatttgcatagacagatttatcaattggttttcccatcatttg
agtaactttcaattccggtggagctgggatgactggtctgattgtctggctctggaccct
gacaagcccagaccaaaatttgtgcgtgaagtgttggagaaatgtatgagactctcgtat
tatcaaagattagtggacattgttcctgaaaactttgcagctttgttgccagcaaatcct
ntatgtatttacaagtacggagatgagagcaacagttctctgccaggctaccaagtggct
gtcagtgtttgcactgctattaaaaccaaagctggcatcgatgaaattgtgagcttcctg
aaggaccttcccaatcctaatcaagatgatgatgatgatgaagggttcagctttaatcct
ctgaagattgatgtttttgtgcagactttactttacctggcctccaagtccttcagccat
tcctttagtgctttggcaaaatttcatgaggtgtttaaggtgttggctgaaggggatgac
ggcaagttacatgttctaagagttatgtatgatgtctggaagtgtcatcctcagatgatg
gccatgttagttgataaaatgattcgaacacaaattgtcgattgtgctgcagtagcaaac
tggatcttctcctcggagatgtctcccgattttactaggatgtatgtctgggaaattctt
cattccaccataaggaaaatgaacaagcatgtgttgaaagtccagaaggagcttgacgag
actaaagataaactagataagcagcataaaagacgagatagtgatgaagactacgataac
agtgatgaggaagacggccctctggaagatcagattgaacgtctgcaggagaaggtcgaa
tctgctcaaagtgaacaaaagaaccttttccttgtagtttttcagcgttttataatgatt
ctgacagaacatctcgccaggtgtgaaaccggtgggatcgattttaacacctcctggtat
aagaactgcattgaaagattgcagcagatctttctccagcatcaccagattatccagcag
tacatggtcacgctggaaaacctgctcttcacagctgagctcgaccaccacatcctcgct
gttttccaacagttctgtactcttcaggcatag
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integrated database retrieval system
