Callorhinchus milii (elephant shark): 103182486
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Entry
103182486 CDS
T03088
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6-like isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03015
mRNA surveillance pathway
cmk03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103182486
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103182486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmk03019
]
103182486
Messenger RNA biogenesis [BR:
cmk03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
103182486
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
103182486
NCBI-ProteinID:
XP_007897727
UniProt:
A0A4W3GLG9
LinkDB
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Position
Unknown
AA seq
546 aa
AA seq
DB search
MAVLLKMAGELGEELLDAESAGEGGSRQQLEIESEEQKDLYDDLINDIIGVPLNNGLVPK
ETPFDFVPAPKSFNITIQTKPVVVSKPALPQRIEIPCSEEKVLLIGNLTWWTTNDDIMAA
IRTAGICNVDRIKFYEVQKGGQSKGFVKVCLSSDWDLNRLLEMLPKKEIHGRIPDVRCFT
MSNRQYFEMQFINAMENSKLHLPDEEGQEDYDKDDPEKSDNESLPDALEEATEDPDFEEE
TPSPFQQPVVKLISEACHPPCPPPPNVMLRHLIPLGLPAGNLLPPGLIRHSQTLNTPHGN
LPTFLTPVSTGQTVLDSSTNPQQGYCAYTLDYRIPRREMHFPEKSPNTMEFVTEINRTQN
FPPSDGSVVSKDGHSNDYGTLIKLVSLVKQSKAIAQDGYRDSPNCTPEKPHNEEPKPKPH
ASGSWEKELSRKREKRRSGERSGSRRDRSRSPGSHERYYREREPDYDRGRQHSHQRDHSP
HRDYYPERNREQRDSCGKDRPCDSPRYSSRSNESWDKYPPKTSQGQDYTQEKYCGIKPDK
DRNYRF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgctgttgaagatggcgggtgaattgggagaggagctgctggacgccgagagt
gcgggggagggcggctccaggcagcagctggaaattgaaagtgaggaacagaaggatttg
tacgacgatctgataaatgatataataggagtgcctttgaataatgggctggttcctaaa
gagacaccctttgatttcgtgccagcgcccaaatccttcaacatcaccatacagacaaag
cctgtcgttgtcagtaaacctgctcttccacagaggatcgaaattccatgttccgaagag
aaggttctgctcatcggaaatctgacgtggtggacaacaaatgacgacatcatggcggcc
attcgtacagctggaatatgtaacgtcgatcgaatcaaattttatgaagttcaaaaaggc
ggacagtcaaaaggatttgttaaggtgtgtttgtcatcagactgggatctcaatagactg
ttagaaatgcttccaaagaaagagatccatggaagaattcctgatgttcgttgtttcacc
atgtcaaatcgacagtactttgaaatgcagttcataaatgcaatggaaaattccaagttg
cacttacccgacgaggaagggcaggaggattatgataaagatgatcccgagaaaagtgac
aacgaatctctgcccgacgctttggaagaagccactgaagatcccgactttgaagaggaa
acgccttcgcctttccaacagccggttgtgaaactcatcagtgaagcctgtcatcctccc
tgtcctcctccccccaacgttatgttgcgtcacttaattccattgggattaccagccggg
aaccttctacctcctggtcttatcagacacagtcagactttaaatactcctcatggcaac
cttcccaccttcctaacaccagtcagcacaggacagactgttttagacagtagcacgaat
ccacagcagggttactgtgcttatactctggattacagaataccaagaagggaaatgcat
tttccagagaaatcgcccaatacaatggagtttgttaccgaaataaacagaacacagaat
tttccaccgagtgacgggtctgtggtgagcaaagatggccattcaaatgattatgggact
ctaattaaactggtttccttagttaagcaatcaaaagcaattgcacaggatggatacagg
gattcaccaaactgcactccagagaagcctcacaatgaagaacccaaacccaaaccacac
gcctcgggatcgtgggagaaggagctttcaaggaaaagagaaaagcggagatcgggcgag
aggagcgggagtcggagagatcgttctagaagtccgggttcccacgagcgttattaccga
gagagagaacccgattacgatcgagggagacagcacagtcatcaaagagatcactctcca
cacagggattattacccagagagaaaccgagaacaaagggacagctgtgggaaagacaga
ccctgtgattcacccaggtattcctccagaagtaacgagtcctgggataagtatccacca
aagactagtcaaggacaagattacactcaagaaaaatattgtggaataaagccggacaaa
gacagaaattaccgattttaa
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