Callorhinchus milii (elephant shark): 103182687
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Entry
103182687 CDS
T03088
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger FYVE domain-containing protein 16
KO
K04679
MAD, mothers against decapentaplegic interacting protein
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04144
Endocytosis
cmk04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
103182687
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103182687
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmk01009
]
103182687
Protein phosphatases and associated proteins [BR:
cmk01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103182687
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SARA_C
FYVE
SARA
Motif
Other DBs
NCBI-GeneID:
103182687
NCBI-ProteinID:
XP_007897966
UniProt:
A0A4W3HS28
LinkDB
All DBs
Position
Unknown
AA seq
1543 aa
AA seq
DB search
MDNYFKAAVCDLDKLLDDFEQNPDENDFCKTNAGGRISLDCSSLHSTSKTLTDLSEATAQ
PTISVHSSDTQRGSDSLSLCDHWETAALAQSEKPLTGLDLLSTVDGRASIDPNELSHGRG
NGSLCDLISDTESVTHETHSHEADMEPDVKPIENQSTGSLLIDFDRTSPPVPVGDLGLEC
SAGGSLGITSLLELDISFPNGTELDPQQVQNVNARTRDTECANGFQQENAFKETGPQEGE
GPENVGGHFGEQLTEPDCTKELSTVSELTKENNFVATGSTEDDDSTDQSESLEDCSWANA
ATGTELSNTTAATASEPEEIDPRLHVEKELLKVRYTCNAGLTKDHKKTEVCVNNSTKSTE
AHYSRNCLVPEQDSQLYPPQKEVIEIVDNGTNVCTVNGKAVHLSSESQDRDLPFMDDIDC
DLVHTGDISPEESIGLESDEKPEERAEAFCDTEGEQHERTQNYSGDDDVVNMPINPFEEI
LTDTGDVETMTTPALTNHEDFPIDFSLNNILKDGLGDITDMVSDSELDAFLMEQDMNESA
VEPSVNGFLELNLGRSGSLEPGVSFSLPKTTDSSCISLHPQVETAPKSAEHEKGRLALDI
GNTLSPAENGVISPAVNDTVSGASTANVAARNINNQKLSSSDSGQVADYSPVHKQVNFGG
ARPKQRLNVSPRITPTTELSDPGTTNAEDVSNNSKLYIDTKGAVADVVQSPSILSPTCSF
SIITEDETQVFGPSYDCITNDDCEGNAAETMCLPEQLMREAAALGQSQPQWIPDSKAPNC
TKCQARFTFTRRRHHCRACGKVFCTGCCNQKCKLKYLENKEARVCVVCFETIHKAQAFKT
MMSPTGPSPNPNIPSEYCSTVPPLQQAQASGTLASPPLTVMVPTSVLKHPGNESTGTNPR
EHKRVWFADGILPNGEVADTEKLTATSAAIIAKRTSQDSSPTSPIAHEPKSPPFSSPVDE
VPSYDVQSQVSELRTDPKAFPPNPAEDFKPDFTGPIDHRLLATVGKSVTKVTSLIPDGEH
GLPPVVITIGEQEGHVVEEHPNQGQIMLLLEEGGPKPLTFVLNANLLLNVKLVNYAARKC
WYFVSSGLHGMGQAEVVVLLLCEPDESTIPKDIFNFFITMYQDASKGKSIGNLGNISFME
SFLGSKDHGGFLFVEPTFQSLEDLPLPDSPFLFGILIQKLEVPWAKVFPIRLMLRLGAEN
NVYPCPLVSVRTRKALFTETGHTIMNLLADLRNYQYTLPTIEGLVLHMEMGKSYIKIPKR
RYNEVMKVVNSSNEHVIAMGMCFSMAADSHLVCIQNEDRSYQTQANSVTGKSRKVTGASF
VVFNGALKTTSGFIAKSSIVEDGLMVQITPETMEGLRQSLKEKRDFQIICGRLDSSDVKE
YMNIQWLDGENPVNKGVMSPIDGRSMEGVPSIRVLQETEFEADGIVVRCTEVFFLQRNHD
PLNPNIPPAQNQLTKEIATACCAALCPHLKVLKEIGINKLSLRVSLDTDKVEYQAGTRGQ
LLPQNYMNDLDSALIPVIHSGSSHASSGPLEMELFFFLLETLL
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
atggacaattatttcaaagcagcagtctgtgacttggacaaattactcgatgattttgag
caaaatccagatgaaaatgatttctgtaagacaaatgcaggagggcgtatatctttggac
tgttcatctcttcattcaacttccaaaacccttacagacctttcagaagccactgcacag
ccaacaatcagcgtccactcctctgatactcaacgtggatcagattcattgtcactatgt
gaccattgggagactgcagcattggcacagtcagaaaagcctttgacaggattggacctg
ttgtctactgttgacggaagagcttccattgatccaaatgagttgagtcacggcagaggc
aatggatccctctgtgacctaatcagtgacactgaaagtgtaacccatgaaacacacagc
catgaggctgacatggaaccggatgttaagcccattgagaaccaatccactggttcactg
ttgatcgactttgatcggacctcaccaccagttcctgttggtgaccttggattggaatgt
tctgcaggagggagtttgggaattacgagcctgttggagctggatatatcatttccaaat
gggacagagcttgatccgcagcaagtacaaaatgttaatgctagaacaagagacactgaa
tgtgctaatggtttccagcaggagaatgcattcaaggaaactgggcctcaagagggggag
gggcctgaaaacgtagggggacattttggggagcagttgactgagcctgactgtactaaa
gagttgtcaactgtctcagagttaaccaaagagaacaattttgtagctacaggctcgact
gaagatgatgacagcaccgaccaaagcgagagcttggaggattgcagttgggccaacgca
gccacgggaacagagttgagcaacacgaccgctgctacagccagtgagcccgaggagatt
gatccaaggttacatgttgaaaaagaacttttaaaagtaagatatacgtgcaatgctgga
ttaacaaaagaccataaaaaaacagaagtttgcgtgaataattctaccaaatccactgaa
gcccattattcacgaaattgtttagttccagagcaggattcacagctttacccacctcaa
aaggaagtaattgaaatagtggacaatggtacaaatgtgtgcacagtgaatgggaaagct
gttcacttgagctccgagtcgcaggatcgagatttgccatttatggatgatatcgattgt
gatctagtgcacactggagatatctctcctgaggagagtataggtttggagagtgatgag
aagcccgaggaaagggcagaagcattttgtgacacagagggagaacagcacgaaagaact
caaaattattcaggtgatgatgatgttgtaaacatgccaattaatccatttgaggaaata
ttgactgacacaggtgacgtggagaccatgacgactcctgctttaactaatcacgaagat
tttccaattgacttttcacttaataacatccttaaagatgggcttggtgatataaccgat
atggttagtgattccgagcttgatgcattcttaatggagcaagatatgaatgagtctgcg
gtagagccttcagttaatggctttttagagctaaacttaggccgaagtggttcacttgag
ccaggtgtttctttcagtcttcctaaaaccactgattcgagttgtataagtctgcatccc
caggtagagactgctcctaaatcagctgaacatgaaaaagggagattggcattagatatt
gggaatactttatctccagcagaaaatggtgtgataagccctgctgtaaatgatacagtg
tctggggcatctacagctaatgtggcagccaggaatataaacaatcagaaattgtcctca
agtgactctggtcaagtggccgactatagcccagttcacaagcaagttaattttggaggc
gctagacccaaacaacgtctgaatgtctcacccagaatcacgccaactacagaactcagt
gatccaggtaccaccaatgctgaggatgtttcaaacaactcaaagctgtatattgacaca
aaaggtgctgttgctgatgtagtccaaagcccttcaattttgagtcccacttgcagcttc
agcattattacagaagatgagactcaagtgtttggaccttcttatgattgcataacaaat
gacgattgtgagggaaatgcagcagaaacaatgtgtttaccagaacagttgatgagggaa
gcagcagcactgggccagagccaaccacaatggatacctgattccaaagctccaaactgc
acaaaatgccaagctagattcactttcacaagacggagacatcactgtagagcgtgtggg
aaagtgttctgtactggctgttgtaatcaaaagtgtaaactcaagtacttggaaaacaaa
gaagctcgggtttgtgttgtctgctttgagaccatacacaaagctcaagcatttaagaca
atgatgagcccaactggtccaagccctaaccctaatatcccatcagaatattgttccaca
gttccacctctgcagcaagctcaggcatctggcaccctcgcctcccctcccctcactgtc
atggtacccacttcggtactaaaacacccaggaaatgaaagcacaggcaccaatcctaga
gagcacaaaagggtatggtttgctgatggcattttaccaaatggcgaggtggcagacacc
gaaaaattgacagcaacttcggcagctattatagccaagagaacatcacaagattcaagc
cctacaagtccaatagcacatgaaccaaaatcgcctccctttagtagcccagtcgacgag
gtaccttcctatgatgtccaaagccaagtgagtgaattgaggactgatccaaaggcattt
ccaccgaatccagcagaagatttcaagcctgactttactggccctatagaccacagacta
ttggctactgtagggaagtctgtcactaaagtcaccagccttattccagatggtgaacat
ggattgcctcctgttgtcataacaataggagaacaagaaggtcatgtagtggaggagcat
ccaaatcagggccagattatgctgctactggaggaaggaggccctaaacccttaacattt
gtgctgaatgccaatcttctgcttaatgtgaaactggtgaactatgctgcaaggaaatgc
tggtactttgtaagcagtggattgcatggtatgggtcaggcagaagttgttgttctgttg
ctttgtgagcctgatgaaagcacaattcccaaagatatcttcaacttctttatcacaatg
taccaagatgcatctaaaggaaaatccattggaaacttaggaaacatttctttcatggaa
agttttcttggcagtaaagaccacggtggattcctgtttgttgaacccacattccagtca
ctggaagatcttccactgccggacagtccatttttgtttggaattctcattcagaaactt
gaagtaccctgggcaaaggtgtttcctattcgactcatgctaaggcttggagcagagaat
aatgtttacccttgtcctctggtgagtgtccgaacccggaaagcactctttacagaaaca
ggccacaccatcatgaacttgctggcagatcttcgaaattaccaatatactctgcccact
attgagggtttagtgcttcatatggagatggggaaaagctatattaagattccaaagaga
agatacaatgaggtcatgaaagtggtgaactcttcaaatgagcatgtaattgcaatgggc
atgtgctttagtatggcggctgactcacatctggtttgcatacagaatgaggatagaagt
tatcaaacacaggcaaacagtgtcactggaaaatccagaaaagttacaggagccagtttt
gttgtgtttaacggagctctgaaaaccacctcaggatttattgctaagtccagtatcgtt
gaagatggacttatggtgcagattactccagagacaatggagggtttaaggcaatctcta
aaggagaaaagagactttcaaattatctgtggaagattggattcaagtgatgtgaaagaa
tacatgaatattcaatggttggatggtgaaaatcctgtaaataaaggtgttatgagccct
attgatggtcggtcaatggaaggagttcctagcatcagagtcttgcaagaaacagagttt
gaagcagatggtattgtcgtcaggtgtacagaggtgttctttttgcaaagaaatcatgac
ccgctcaatcctaacattccacctgcacagaatcagttgaccaaagagattgctactgct
tgttgtgccgctctatgtcctcatctgaaagtccttaaagaaatcggaataaacaaactg
agtctcagggtctccttagacactgacaaggttgagtatcaagcaggaacaaggggtcag
cttcttccccaaaactatatgaatgacctggacagtgctttaataccagttattcacagt
ggcagttctcatgccagcagtgggcctctcgaaatggaattgtttttcttcctcctggaa
acccttctctga
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integrated database retrieval system
