KEGG   Callorhinchus milii (elephant shark): 103182902
Entry
103182902         CDS       T03088                                 
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk04137  Mitophagy - animal
cmk04144  Endocytosis
cmk04145  Phagosome
cmk04148  Efferocytosis
cmk05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    103182902 (rab5b)
   04145 Phagosome
    103182902 (rab5b)
   04137 Mitophagy - animal
    103182902 (rab5b)
   04148 Efferocytosis
    103182902 (rab5b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    103182902 (rab5b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cmk04131]
    103182902 (rab5b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cmk04147]
    103182902 (rab5b)
   04031 GTP-binding proteins [BR:cmk04031]
    103182902 (rab5b)
Membrane trafficking [BR:cmk04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    103182902 (rab5b)
 Endosome - Lysosome transport
    103182902 (rab5b)
Exosome [BR:cmk04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103182902 (rab5b)
  Exosomal proteins of other body fluids (saliva and urine)
   103182902 (rab5b)
  Exosomal proteins of colorectal cancer cells
   103182902 (rab5b)
  Exosomal proteins of melanoma cells
   103182902 (rab5b)
GTP-binding proteins [BR:cmk04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    103182902 (rab5b)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA MMR_HSR1 RsgA_GTPase SDR-like AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 103182902
NCBI-ProteinID: XP_007898276
UniProt: V9L0E5
LinkDB
Position
Unknown
AA seq 213 aa
MANRGASRPNGLGQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQS
VCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKQETFDRAKAWVKELQRQ
ASPNIVIALSGNKADLADKRMVEYEEAQAYAEDCGLLFMETSAKTAMNVNDLFLAIAKKM
PKNDPQNPATAARNRGVNLQETNQPNQRGCCGN
NT seq 642 nt   +upstreamnt  +downstreamnt
atggcaaaccggggagcttctaggcctaatggcctaggccagacaaaaatctgtcagttc
aaactggttttactaggagacatggcagtggggaaatccagtttagtcctgcgtttcgtc
aaaggccaatttgatgagtttcaagagacgacaattggagctgcgtttcttgctcagtca
gtctgtttggatgatacaacagtaaaatttgagatctgggatacggctggtcaggagcgc
taccacagtttagcaccaatgtattacaggggggcccaggctgccatagtggtatttgat
atcacaaaacaggaaacatttgatcgagcaaaagcgtgggtaaaagaattacaaagacaa
gccagtcctaatatagtgatagctttgtctggtaacaaagccgatcttgcagacaaacgt
atggtggaatatgaggaagcacaagcctatgcagaagactgtggtttgcttttcatggag
acttcagcaaagacggccatgaacgtgaatgatctctttctagcaatagctaaaaaaatg
ccaaaaaatgaccctcagaatccagccaccgctgccagaaatcgaggagtaaatcttcag
gaaacaaaccagccgaaccaaaggggctgctgcggcaattaa

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