Callorhinchus milii (elephant shark): 103182903
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Entry
103182903 CDS
T03088
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04140
Autophagy - animal
cmk04148
Efferocytosis
cmk05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103182903 (vps16)
04148 Efferocytosis
103182903 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103182903 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmk04131
]
103182903 (vps16)
Membrane trafficking [BR:
cmk04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
103182903 (vps16)
Hops complex
103182903 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
103182903
NCBI-ProteinID:
XP_007898277
UniProt:
A0A4W3IST2
LinkDB
All DBs
Position
Unknown
AA seq
838 aa
AA seq
DB search
MAFVTANWNPLGEVFYRKFDLYTVKWMMREDFSNCLITAAPYGGPIALMLNAMRKERSQS
LRPVLEIYSSSGALITSFPWKSGLVVHIGWTASEDLLFIQDDGTVLIYDIFGTFKRHFSM
GNEVLQNRVVEAKVFHSVYGSGVAILTGAFRFTCATNIDDLKLRRLPEIPGLQDSPTCWV
VLMQDRQTRIILANGKDLYILDNASCIAVTPPNLGPQVCAITQIAVSFNYKWLALFTDDG
NIWMGPSTLKDSLVVIDTNYRIPPKQFAWCTRSKSTNPCVVGIWDKLLLVVGSSKEKIKF
HLDEEVHLVPEIDGVRIIGASRHEFLHEVPPACQDVFKIASMAPGALLLEAHKEYEKESQ
KADEYLREIKDQNLLFEAVQQCIEAAGHEYEPEMQKTLLRAASFGKCFISNFPPDMFVRM
SRDLRVLNAIRDSTIGIPLSYPQYQQITMEVLIDRLVLRRLYPLSIKICEYMKISEFKGA
SRILAHWACYKVQQKEEPDDSIARVINDKLGDTPGISYSEIAARAYDCGRTELAIKLLEY
EPRSGEQVPLLLKMKRSNLALHKAIESGDTDLVYTVVMHLKNEMSRGDFFMTLQNQPVAL
SLYRQFCKHQEPETLQDLFNQDDNHQELGNFRVYSSYSNETTIEGRVAALQNAVDEYNKA
KNEFAAKVTEEQIKLLRYQSRMQKDTGKTYLDYSLHDTVYNLLLDSKLKQAEQLYKDFKI
PDKRFWWLKISALAEKQDWEELEKFSKSKKSPVGYMPFVEICVKHHNKYEAKKYVTKVSP
EQKVKAFIMVGDLDQAVETATERKNENELNMILLKCTPVTDRLILEKINRAKSQLLKK
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcgtgacggcgaactggaaccctctgggggaggtgttctacaggaagtttgac
ctgtacaccgtgaagtggatgatgagagaggactttagtaactgtctgatcacggctgca
ccatacggaggtccaatcgctttgatgctgaatgccatgcggaaggaacggtctcaaagt
cttcggcctgttttggaaatctactcctcctctggagctctgataacttctttcccatgg
aaaagcggcctagtggttcacattggatggactgccagtgaagatctgctctttatacaa
gatgatggcaccgttcttatctacgatatatttggtacatttaagagacatttcagcatg
ggcaatgaggtgttgcagaatcgagttgtggaggccaaggtgttccactctgtttacggc
tccggagttgctatattaactggtgcttttcgattcacttgtgctacaaacatagatgat
ctcaagcttagacgacttcctgaaatcccaggactccaggactccccgacatgttgggtt
gttctgatgcaagatcgacagacccgaatcattctggctaatggaaaggatttatacata
ctggataatgcttcctgcatagctgtaactcctccaaacctgggcccacaagtctgtgca
attacccaaattgctgtttcattcaattataaatggctggctttattcacagacgatggc
aacatttggatgggtccatcgacactaaaggactcgttggttgtgatcgacacaaattat
cgaataccgcctaagcagtttgcttggtgtaccagatcgaaaagcaccaacccttgcgtc
gtgggaatctgggataaactccttttggtcgtgggaagttcaaaggagaaaataaagttt
cacttggatgaagaagtccacttagtgcccgagattgatggggttcgaatcatcggtgct
tctcggcatgaatttcttcacgaagtcccacctgcatgtcaagatgtattcaaaattgcc
tccatggcacctggtgcacttttgctggaagcccataaagaatatgagaaagagagccag
aaggcagatgagtatttgcgggagataaaagaccagaatctgctgtttgaggctgtgcag
cagtgtattgaggcagcaggtcatgagtacgaaccagaaatgcagaagactttactgagg
gcggcctcttttggtaagtgcttcataagcaactttccaccggacatgtttgtgaggatg
agcagagatctgcgggtgttgaatgccattcgagacagtaccattggcatccctctcagc
tatccccaataccaacagatcaccatggaggttctgattgacagactagttttgcgtaga
ctttaccctctttctataaagatttgcgagtacatgaaaatatcggaattcaagggcgca
agtcggattttggcacattgggcctgctacaaggtgcagcagaaagaggagcctgatgac
agcattgctcgtgtgatcaacgacaaactgggggacactccagggatttcctattccgaa
attgctgccagagcttacgattgtggcagaacggagctggcaataaaacttttagagtac
gagccaaggtctggcgaacaagtccctttgctgctgaagatgaaaagaagtaatctggca
ttacataaagctatagaaagtggagacactgacttagtgtacaccgttgtaatgcatcta
aagaatgagatgagcagaggagatttctttatgactttgcagaaccaaccagttgccctg
agcctttaccgacagttctgtaagcaccaggaaccagagacgctccaagatttgttcaac
caggacgacaatcaccaggaacttggaaattttcgcgtgtattccagttattccaatgaa
acgaccatagagggaagagtagcagctttgcagaatgctgtagatgaatacaacaaagcc
aaaaacgaattcgctgccaaggtcacggaggagcagattaagttgctgcgataccaaagt
cgtatgcaaaaggacactggtaaaacctatctggattactccttacatgacactgtctac
aatctcctgctggacagcaaactcaaacaagcagaacaactttacaaagattttaagatt
cctgacaaaaggttttggtggctgaagatctctgcattggcagagaagcaggactgggaa
gaactcgaaaaattttctaaaagtaaaaagtcaccagtaggatacatgccttttgttgaa
atttgtgtcaaacatcataacaagtatgaggctaaaaaatacgtaacaaaggtcagccca
gaacagaaagtaaaagcctttataatggttggagacctggatcaagctgtggaaacagcc
actgaacgcaagaatgagaacgagctgaacatgattctgttgaagtgtacaccagtcacc
gatcggttaattctggagaaaataaaccgagcaaaatctcagctcttaaagaaatga
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integrated database retrieval system
