KEGG   Callorhinchus milii (elephant shark): 103183306
Entry
103183306         CDS       T03088                                 
Name
(RefSeq) lissencephaly-1 homolog
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk00565  Ether lipid metabolism
cmk01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    103183306
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cmk03036]
    103183306
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cmk04147]
    103183306
Chromosome and associated proteins [BR:cmk03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    103183306
Exosome [BR:cmk04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103183306
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SCAP Beta-prop_EML Beta-prop_Nup120_160 Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_IFT140_1st LisH Beta-prop_SPT8 Beta-prop_DCAF12 Beta-prop_RIG_2nd LisH_PAC1 eIF2A Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd Beta-prop_WDR19_1st Nucleoporin_N Beta-prop_NUP159_NUP214 Pox_A_type_inc LisH_2 ARMC9_LisH SutA-RBD DUF2570
Other DBs
NCBI-GeneID: 103183306
NCBI-ProteinID: XP_042194423
LinkDB
Position
Unknown
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEFTSAGPLGQKRDPKEWIPRPPERYALSGHRSPVTRVIFHPVF
SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQ
SFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVQTGYCVKTFTGHREWVRMV
RPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECLSWAPESSYPTVLEATGSE
AKKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVLFHPGGKFIVSCADDK
TIRVWDYKNKRCMKTLNAHEHFVTSLDFHKAGPFVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgttgtcacagagacaaagagacgaactaaatcgagctatagctgattaccttcgt
tctaatggctatgaagaggcttattcagtttttaagaaggaagcagagttagatatgaat
gaagaattagacaagaagtatgctggactgctggaaaagaaatggacctcggtgataaga
ctacaaaagaaggttatggaattagaatcgaaactcaatgaggcaaaagaggagttcact
tcagctggccctctgggtcagaagcgtgaccccaaagagtggatccctcgtcctccagaa
agatacgctctgagcggacacagaagtccagtcacacgagtcatttttcacccagttttc
agtgttatggtatcggcttctgaagatgctacaataaaggtctgggactacgaaactgga
gattttgaacgtacactgaaaggtcacacagactctgtacaagacatctcctttgatcag
actggcaagctgctggcatcctgctctgctgatatgaccatcaagctttgggattttcag
agctttgagtgcattcggaccatgcatggccacgatcataatgtttcatcagtagctatc
atgcctaatggagatcatatagtgtctgcctcaagggataaaaccatgaaaatgtgggag
gtgcagactggttattgtgtgaagactttcacaggacatagagaatgggtgcgcatggta
cgacccaaccaggatggcactcttctggccagctgttctaatgaccagacagtgcgtgtg
tgggtggtagcgacaaaggagtgcaaagctgagcttagggagcacgaacatgttgtagaa
tgcctttcgtgggcaccagagagctcttacccaacagttttggaagctacaggatctgag
gctaaaaagagtggcaagcctggacctttccttctttctggatccagagacaagacaatt
aagatgtgggatattagcattggaatgtgccttatgacactggttggccatgataactgg
gtacgtggtgtcctgtttcatcctggaggaaagtttattgtgagctgcgctgatgacaaa
actattagagtgtgggactacaagaacaaacggtgcatgaaaaccctgaatgcacatgaa
cacttcgttacctctcttgatttccacaaggcgggtccatttgttgtcactggaagcgta
gatcaaacggtaaaggtctgggagtgccgctga

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