Callorhinchus milii (elephant shark): 103183400
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Entry
103183400 CDS
T03088
Symbol
lsm5
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03018
RNA degradation
cmk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103183400 (lsm5)
09123 Folding, sorting and degradation
03018 RNA degradation
103183400 (lsm5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmk03019
]
103183400 (lsm5)
03041 Spliceosome [BR:
cmk03041
]
103183400 (lsm5)
Messenger RNA biogenesis [BR:
cmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103183400 (lsm5)
mRNA degradation factors
5'-3' decay
Lsm complex
103183400 (lsm5)
Spliceosome [BR:
cmk03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
103183400 (lsm5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
103183400
NCBI-ProteinID:
NP_001279176
UniProt:
K4FUF4
LinkDB
All DBs
AA seq
90 aa
AA seq
DB search
MAVTVTNPSQLLPLELVDKCIGSRIHIVMKNDKEIVGTLLGFDDFVNMVLEDVTEFEITP
EGRRITKLDQILLNGNNITMLIPGGEGPEV
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaccgttaccaacccgagccaactgctgcctctggagcttgtggacaaatgt
attggctcaagaattcacattgttatgaagaatgataaagaaattgtaggaacattattg
ggttttgatgactttgtcaacatggtacttgaagatgtcacagaatttgagatcacacca
gaaggcagaagaattacaaagctagatcaaatcttattgaacggaaacaacataacaatg
cttattcctggtggtgaaggtcccgaagtatga
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integrated database retrieval system
