Callorhinchus milii (elephant shark): 103183404
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Entry
103183404 CDS
T03088
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
103183404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmk04131
]
103183404
Membrane trafficking [BR:
cmk04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
103183404
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
TPR_Vps41
Beta-prop_WDR36-Utp21_1st
WD40_CDC20-Fz
Clathrin
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_EML
WDR55
ANAPC4_WD40
UBA_HOIP
PEP5_VPS11_N
WD40
Beta-prop_EML_2
Beta-prop_HPS5
Beta-prop_THOC3
HAMP_2
WD40_Prp19
Motif
Other DBs
NCBI-GeneID:
103183404
NCBI-ProteinID:
XP_042188283
LinkDB
All DBs
Position
Unknown
AA seq
1214 aa
AA seq
DB search
MASVDLLKPTNWCKDPQLLPVAQGSVLHHIILKGLSAQITSAADRVDAGTPTAMAVSDLI
AIGTLHGLILIFDPKQALKLCLGSTAHGAQYGAITALTFNNDCTRLLCGFARGQIIVWDS
GTGKLLRTITDAHPPGSAVLSIKFTVEPTLAVCNDSSSNVFELHFKRAIGTKTCESRCLF
SGTKSEVCCIEPLQICDEFMAHPVAQYCLFAMVSLTKLLVVGLKPSFNILYRSPYGKAQP
SSVPVLAWQFVWTQERVDPVLAFCRGSKIIFFHLNCAGDQIEFASLMEIDLQYEIINLKW
VNSRTLLLQDGLDKLHVIDRESCEELDSHSLADVHLVRSCSYFDSSESKQTISPTMREIQ
EKACYQSIWTYGGQTVFLGAKSVHVISLKVWHERIDFLVKQEQFSEALALGWAFHEGTAK
ATVGLPGENQKKKALVKDKMVDVILQYIQATLKSCPQHGKIQVMEEHYQKAIPICVVACI
LIDKIDFLCGSIYDKLAPNAVAFGVLLECLEPHILSNRLNGITPQMVKDLVVHFEDKGML
DSIEALIVHLDVTTLDIHQIVSLSRTHGLYDVLVHIFNKGMNDYVTPLEEMIQAIDSILK
TGKLHSKELVTIGNKVLVYISCCLSGRAYPLGDIPEDLVLVVKKEVFQSLMRAHSNNAEP
GEEPYHNVRTLLKCNTREFLNVLALTFEDLQKDKQAVEFQQRITDILLKVMVEGTEFTPS
QIGCLFTFLARQLARAESSLFVNKQLFDRVLDFLCDPEDSSRHEERQQALLELLQAGGIV
YFDEEKLISLAEKVQFYRICEFVYERKRLHSKILMCYIHDEIRKIQVHKYIHHVINNVEM
TKDESVSFKEELFNHIHELLEINPRQTAMLILREFSSSIATILEILKDPQLLFQFLNGIL
DPSTVPWPFQDASLLNAEYHEKYIELLCQNKPDLVTTFLTMSESYRLEEAIEAVKKHHVH
DALAYLLEKQGNVQGAVSVLLENLKNKLNSLAESFHFKQGNTELGEFNTEIPGLYNVQTS
LEEMIKLCQRSSRNLNFEQKEALWFPLLELIMAPSHHLKTKISSPFADGIKLLTKMVLNS
ITDHIPPTAILQKVIQDPGYSMGKFGDVRDLTLGMLDTFVYEQIATKATRQTPDKEKTED
GILDPRQIATFDHMRTVFENPSRLTLLLDLARHNAAVTDNTKIVPVESIHYFNQSSIIRS
KNFQLQLVPPPLVD
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atggctagtgttgatctgttgaaaccaactaattggtgtaaagatccacagttgcttcca
gttgcacaagggtcagtcctacaccacattattctcaaaggtttgtctgcacaaatcaca
tcagcagctgatagagttgatgcaggtacaccgactgcaatggctgtgtctgatctcata
gcaataggaacactgcatggcttgattctcatctttgatccaaaacaagctttgaaacta
tgcttgggcagtactgcacatggtgcccagtatggagccattacagcacttacttttaac
aatgactgcactcgtttactttgtggatttgcgaggggacagatcattgtgtgggatagt
ggaactggcaaacttctccgcaccattacagatgctcatcctcctggttctgctgtttta
agtatcaagtttacggtcgaaccaacattggctgtgtgcaatgatagcagcagcaatgtg
tttgagcttcatttcaaaagagccattggaactaaaacgtgcgaatcacgctgcctcttc
agtggtacaaaaagtgaagtttgctgtattgagcctctgcagatctgtgacgaatttatg
gctcatccagtggcccagtactgtctatttgccatggtctcactcactaagctgcttgtg
gtgggtctaaagccttcatttaatatcttgtacagatcaccatatggaaaggcacagcca
agtagtgtacctgtgttagcttggcaatttgtctggacgcaagaacgtgtggacccagtt
ctggctttctgtagaggatccaaaatcattttttttcatctaaactgtgcaggtgatcag
atcgaatttgccagcctgatggaaatcgatcttcagtatgaaataataaatctcaagtgg
gtgaattcacgaaccctgttgctacaagatgggttggataagcttcatgtcatcgatcgg
gaaagttgtgaagaactggattctcacagtttagcagatgtacaccttgttcggagctgt
agttactttgattcatcggaaagcaagcagactataagtccgacaatgcgcgaaatccaa
gagaaagcgtgttatcaatccatatggacttatggagggcaaactgttttcctaggagcc
aagtctgttcatgtgatatcactaaaggtctggcatgagcgtatagatttcctcgtgaag
caggaacagttttcagaggcactggcactaggatgggcattccacgaaggaaccgcaaag
gctactgtcggacttcctggagaaaatcagaagaagaaggcattggtgaaagataagatg
gttgatgtaatattgcagtatattcaagcaactctgaagagctgtcctcaacacgggaaa
atacaggtcatggaagaacactatcagaaagcaattcccatttgtgttgtggcttgtatc
ctcattgacaaaatagattttctttgcggtagcatttacgacaaacttgctcccaatgca
gttgcatttggtgtactcttggagtgtcttgaaccacacatcttaagtaatcgattgaat
gggataacgccacagatggttaaagacctggttgtccactttgaagataaagggatgttg
gatagtattgaagctctgatagtgcacctggatgttacaactttagatatacatcagatt
gtttctctgtcacgaacccatggtctatatgatgtacttgttcatatttttaataagggg
atgaatgattatgttacacctctggaggaaatgattcaggcaattgactcaattctaaaa
acaggaaagctgcacagtaaggaactagttaccattggaaataaagtcctggtctatata
agctgctgcttatcagggagagcctatccccttggagacatccctgaagatctggtgctt
gtagtgaaaaaggaggtttttcaaagtttgatgagagctcattcaaacaatgcagagcca
ggcgaagaaccttatcataacgttcgtactcttctgaagtgtaatacgagggagttccta
aatgtactggcactgacatttgaagatttacaaaaggacaaacaagctgtggagtttcag
caaagaatcactgatatcttacttaaggtgatggtggaggggacagaattcacgccttcc
cagattggttgcctctttactttcctagcacgtcagctagccagagcagagagctccctc
ttcgtaaacaaacaactatttgatcgggtgttagatttcctgtgtgatccagaggacagt
tcacgccatgaggaaagacagcaggcattgctggagctccttcaagcaggggggattgtt
tactttgatgaagagaaactaatttctttggctgaaaaggtgcaattctatcgaatctgt
gaatttgtgtatgagagaaaacgtcttcacagcaaaatcttgatgtgttatattcatgat
gagatcagaaagatccaagtgcacaagtatatccatcatgtgataaataatgtggagatg
accaaagatgagagtgtttcattcaaggaagaattatttaatcacattcatgaattactg
gaaataaatccacgacagactgcaatgttaatacttagggaattttccagcagtatcgca
actatcctggaaatactgaaagatccacaattgctatttcagtttcttaatgggatattg
gatccgagtacagtaccttggcctttccaggatgccagtcttttaaacgcggaatatcat
gagaagtacattgagttgttatgtcaaaataaaccagatttagtgacaacgtttctcacc
atgtccgagagttaccgccttgaagaagcaattgaggctgtgaagaaacatcacgtacat
gatgcacttgcttacctcctggagaaacagggaaacgtacagggggcagtctctgtccta
ttggagaacttgaagaacaagctgaactcacttgcagaatcttttcatttcaagcagggt
aatacagaattaggggagttcaacactgaaatccctggactttacaatgtgcaaacctct
cttgaggaaatgatcaaactctgccaaaggagctctagaaacctcaactttgagcaaaaa
gaggcactctggtttccgctactagagctaataatggcaccgtcacatcacctgaagacc
aaaatatcatccccgtttgcagatggtattaagttgctaacaaaaatggtcttaaatagt
ataacagaccacatcccaccaacagcaatactgcaaaaagtcatacaggatccaggttac
agcatgggaaaatttggagatgtaagagacctaaccttagggatgctggatacatttgtt
tatgagcagattgcaacaaaggccactcggcaaacgccagacaaagaaaagactgaggat
ggtatattggatcctagacagatcgctacatttgatcatatgagaacagtgtttgaaaat
ccttcaagacttaccctgctgctggatcttgccagacacaatgctgcagttacagacaac
accaaaatagtcccagtggaatcaatccattactttaatcaatccagcatcattcggagc
aaaaacttccagctacagcttgttccacccccattagtggactaa
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