Callorhinchus milii (elephant shark): 103183742
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Entry
103183742 CDS
T03088
Symbol
rubcn
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103183742 (rubcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmk04131
]
103183742 (rubcn)
Membrane trafficking [BR:
cmk04131
]
Autophagy
Other autophagy associated proteins
Others
103183742 (rubcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
CMD
Motif
Other DBs
NCBI-GeneID:
103183742
NCBI-ProteinID:
XP_042195294
LinkDB
All DBs
Position
Unknown
AA seq
993 aa
AA seq
DB search
MLSTAGESPWQLEAESRQEHWKLLGSLRTTVEGLLSTNNPNVWSKYGGLERLCKDMNNIM
CHGLVEEKVYSQEKDYWAFVKDVCWVSPRFAHHIEQFMDLDEQSRSWSAPKSNSHKAECW
LYHSLQLHCLSSQLKPLLSNYQHTRKFYKESAFLLSDAHVTAMFQCLEAVEQNNPKILAQ
IDASVFARRCSCSLTMMKSRSLTGLPAFKCVPPVEGVQRRHTASYTSLAYHSSSGIIPDN
ASASFFNASHPQQEPKKRMSPILLDSQDVPVSNQVSVIPQFNIIPAIEPFSPVSETTVST
PISHSEDTWNEVQDEGSNEMDDGPEYLAIGNLGRRDCSSSQYSGTSSGSGCAKPPGKPTK
QVPTISCSTTLLALPRRSSFSEAETLERHGSFKKSHVRSHSDTGLAAARTSRTGDIREIT
LIVEDPVEESQADVPNMKEYGPFSAQSSEVSTPSSPYMEGEGVKYISSSDGLFRRPSQGQ
SLISYLSEQDFGSCADLEKENAHFSISESLIAAIELMKCNLMKKQMEDDDEDSDKEIQEL
KQKIRIRRQQIRNKKFPPGIQDAESDTFTTTESGSPISSHGSAPLTDSGSTDGVDEFELK
DGIDESNLIHMSANGLSTSMASLFSDADIKRSVASSNKSRMNSAPISFSFLHSNSAEAVA
MGLLRQFEGMQLPAASELDWLVPEHDAPQKLLPIPDSFPVSPDDGEHADIYKLRIRVRGN
LEWAPPRPQIIFNIHPSPKRKVVVAKQNYRCAGCGIRVEPDYIKRLRYCEYLGKYFCQCC
HENAQAIVPSRIMRKWDFSKYYVSNFSKDLLSKIWNDPLFNVQDINSALYRKVKSLDQVR
MLRIQLVHMKNLFKTCRLAKTLLDTFDTEPGHLTEDLHLYSLNDLTAVKKGELTGRLREL
VKTGLAHVAKCVLCQAKGFICEFCSDDTDIIFPFELNKCKRCEECKACYHKSCFTSDQCP
RCERLQARRELLARQNTELYFSDPEDAPRKQRL
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgacggcgggagagagtccgtggcagttggaggcggagagcagacaggaacat
tggaagcttttgggaagcttgaggaccactgtggaggggctgctgtcaacaaataacccc
aatgtctggtccaagtatggtgggttagagcgactctgtaaagacatgaacaacatcatg
tgtcacggacttgtggaggagaaggtatattcacaggagaaggattactgggcattcgta
aaagatgtttgctgggtcagccctcgctttgctcaccatattgagcagtttatggacctt
gatgaacaatctcggagttggtctgccccaaaaagtaattctcacaaagcagaatgctgg
ctttatcacagcctacaactacactgcctgtcctcccaactcaaaccactgctcagtaac
tatcagcacaccaggaaattctacaaagaatctgcttttctgttgagtgacgcccatgtg
actgctatgttccaatgtttggaggctgtggaacagaataatcccaaaatccttgctcag
attgatgcgtcagtgtttgctcggagatgcagctgttccttgacaatgatgaaaagtcgg
agtttaactgggttacctgcgtttaagtgtgtacctcctgtggagggagtccagaggaga
catactgcttcatataccagccttgcataccattcttcaagtgggattattccagacaat
gcatcggcaagtttcttcaatgcaagccaccctcaacaagaacccaaaaagagaatgtct
ccaatattgctggattcccaagacgtgccagtgtctaatcaggtttccgtaatcccacaa
ttcaatatcattcctgctattgagccattttctcctgtcagtgaaacaacagtcagtact
cctattagccacagtgaggacacgtggaatgaagtacaagatgaaggatcaaatgaaatg
gatgatggacccgagtacttggctattgggaacctagggcggagggattgcagttcaagc
cagtacagtggtacctcctctggttctgggtgtgcaaagccaccaggtaaacctacaaaa
caagttcctaccattagctgcagtaccactctgctggctctcccaagacgttccagtttc
tctgaggctgagaccctggaacgacacggcagtttcaagaaaagccatgttcgttcccat
tctgacacaggtttagcagctgcaaggacatcgcggacaggagacatccgagaaatcact
cttatagtggaggatccagtggaagaatcccaggcagatgtcccaaacatgaaggaatat
ggcccgttctcagctcagagtagtgaggtcagcactccgagctcaccgtacatggaaggt
gaaggtgtgaagtatataagcagctctgatggactgttccgtcgtccctcccaaggccag
tcactgatcagctacctgtctgagcaggattttggaagttgtgctgatttggaaaaggag
aacgctcatttcagtatctcagagtcgctgattgctgccattgagctgatgaagtgtaat
ctaatgaagaagcaaatggaggacgacgacgaggacagtgacaaggaaatacaggagctc
aaacagaaaattcgcattcgacgtcagcagatccggaacaagaaattcccgccgggaatc
caggatgccgagtctgacacctttaccaccactgagagcgggtctcccatcagctcacac
ggctctgcacctctgactgattcaggatccacagatggagtggatgaatttgagctaaaa
gatggtattgatgagtcaaatctcattcatatgtctgcgaatgggctctcaacatcaatg
gcatccttgttttcagatgcagatataaagaggagtgtggcttcaagcaacaagtctagg
atgaattccgcacccatctcattctcatttcttcattcaaactcggctgaagctgttgcc
atgggccttctgaggcagtttgaggggatgcagcttccggctgcttctgagctggactgg
ctggttccagaacacgatgctcctcagaagcttttgccaattccggactcctttccagtg
tcccctgatgacggggaacatgctgacatttacaaattacggatccgggtccgaggaaat
ctggaatgggcgccacctcgaccacaaatcatcttcaacattcacccatcgcccaagagg
aaggtggtcgtagccaaacagaattaccgctgtgcaggatgtggcatccgagtggagcca
gactatatcaagaggttgcgctactgcgagtacctgggcaagtatttctgtcagtgctgc
cacgagaatgcccaggcaattgttccaagccgaatcatgcggaaatgggatttcagcaag
tattacgtcagtaacttttccaaggatttgttgagtaagatctggaatgatccgcttttt
aatgttcaggacatcaacagtgctttatatcgcaaagtgaaatccctggatcaagtcaga
atgctgagaattcagttggttcacatgaagaatctgttcaagacgtgtcggttggcaaag
actctccttgatacctttgacacagaacctggccaccttactgaggacctccacctgtat
tcgttgaatgacctgacagcggtaaagaaaggggagctgactggtaggctcagggagctg
gtgaagactggattggcacatgtggcgaagtgtgtgctttgtcaagcaaaaggcttcatc
tgtgagttctgcagtgacgacactgacatcatcttcccttttgagctgaacaaatgcaag
cgttgtgaagaatgtaaagcgtgttatcacaaatcctgtttcacgtccgatcagtgtcct
cggtgtgagaggttgcaagctcggagagaactgcttgccagacaaaacactgaactatac
ttttccgatccagaagacgcacccagaaagcagcgattgtga
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