Callorhinchus milii (elephant shark): 103183843
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Entry
103183843 CDS
T03088
Symbol
usp9
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cmk01002
]
103183843 (usp9)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmk04121
]
103183843 (usp9)
Enzymes [BR:
cmk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103183843 (usp9)
Peptidases and inhibitors [BR:
cmk01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103183843 (usp9)
Ubiquitin system [BR:
cmk04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103183843 (usp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Motif
Other DBs
NCBI-GeneID:
103183843
NCBI-ProteinID:
XP_042190340
LinkDB
All DBs
Position
Unknown
AA seq
2526 aa
AA seq
DB search
MTATTRGSPVGGNDNQGQAPDGQSQPPLPQNQTSSPNTSSENSPVSPPDEQGQGDAPPQL
EEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKSLDIKSEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLIELCVAKLSQDWFPLLELLAMALNP
HCKFHIYNGTRPSETVPAGVQLAEDELFARPPDPRSPKGWLVDLINKFGTLNGFQILHDR
YVSGSALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPIIEMVPQFLENLTDEELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGSPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSC
SQDRDTQKIQWIDRFVEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPHVFYRH
DLINQLQHNHSLVTLVAENLSAYMENIRQFHKENPEYDPQTVQPSSRYSHVQEVQERLNF
LRFLLKDGQLWLCAPQAKQIWKCLAENAVYLCDREACFKWFSKLMGDEPDLDPDINKDFF
ENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLEYLWRVVIQ
GSDDIASRAIDLLKEIYTNLGPRLQVNQVEIHEDFIQSCFDRLKASYDTLCVLDGDKDSI
NCARQEAIRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHVSLVVRFPNQGRQVE
DLDIWSHTNDTIGSVRRCILNRIKANSAHTKIELFIGGELVDPADDRKLIGQLNLKDKTL
ITAKLTQISSNMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVEGCLPGVIMSLHPRYISF
LWQVADLGSSLNMPQLRDGARILMKLMPPDNTTVEKLRAICLDHAKLGESSLSPTLDSLF
FGPSASQVLYLTEVVYALLMPASAPLGEDASDFQYNFLKSGGVSLVLGMLTRNNFLLNAD
VETRRAAYLNALKIAKVLLTAVGYGHVRAVAEAFQPVVEGSSTVSPINHATHSQAVVLQN
ALHNIPNPTSECMLRNVAIRLAQQISDEASKYIPDICVIRAVQKIVWASGCGSIQLVFSS
SEDISKIYEKTNAGKEPDSEDEHVCCEALEVMTLCFALVPTALDTLSKEKAWQTFIIDLL
LHCHSKAVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLASTARERAKHSADYFTLLR
HLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRTSETGVEETILEGHLGVTKELLAF
QTPEKKYHIGSEKGGANLIKELIDDFIFPASNVYLQYKKSGELPSEQAIPVCSTPATINA
GFELLVALTVGCVQNLKQIVDTLTDMYYAGCEALTEWEYLPPVGPRPSKGFVGLKNAGAT
CYMNSVIQQLYMIPAIRNGILTTEGTGSDVDDDTSGDEKQDNESNIDPRDDVFSYHHHYD
KPVIGKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNLREQHDA
LEFFNSLVDSLDEALKALGQPTMLSKVLGGSFADQKICQGCPHRYECEESFTTLNVDIRN
HQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRFDYDWER
ECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDINPENQVIQNDQPDNEQPGSTKYRLVG
VLVHSGQASGGHYYSYIIQRNGGDGEKNKWYKFDDGDVTECKMDDDEEMKNQCFGGEYMG
EVFDHMMKRMSYRRQKRWWNAYILFYERMDTIDKDTELVKYISELEITIKPHQIKMPSVI
ERSVRKQNVQFMHNRMQYSLEYFQFMKKLLTCNSVYLNPPPGQDQLLPEAEELAMISIQL
AARFLFNTGFHTKKIVRGPASEWYDALCILLRHSKNVRYWFAHNVLFAHPNRFSEYLLEC
PSTEVRSAFAKLIVFIAHFSLQDGPCPSPFASPGPSSQAYDNLSLSDHLLRAVLNLLRRE
VSEHGRHLTQYFNLFVMYANLGVAEKTQLLKLNVPATFMLVALDEGPGPPIKYQYAELGK
LYAVVSQLVRCCDVSSRMQTSINGNPPLSNPYGDPNLSQPIMTIQQSVADILFVRTSYVK
KIIEDCSNSEETIKLLRFCCWEIPQFSSTVLSELLWQVAYSYTYELRPYLDLLLQILLIE
DSWQTHRIHNALKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFSSCPVAYQILQS
NGDLKRKWTWAVEWLGDELERRPYAGNPQYTYNNWSPPVQSNETSNGYFLERSHSARMTL
AKACELCPEEGTSQVISATETLASSLIGVSQEPDEQEAPDDHDSSPPEDAPLYPHSPSSQ
YQQTTK
NT seq
7581 nt
NT seq
+upstream
nt +downstream
nt
atgacagccacgactcgtggctctcctgtcggggggaatgacaaccagggacaggctcct
gatggacagtctcagcctcccctcccacagaatcagacttcctctcccaacacatcgagt
gagaattcaccagtgagccctcctgatgaacaaggtcagggtgatgctcctcctcagctt
gaggaggaggagcctgcatttcctcacactgatttggcaaagctggatgatatgataaat
agaccccgttgggtggttccagttttgcccaaaggtgaattagaagttcttctagaagct
gctatagatcttagtaaaaaaagccttgatattaagagtgaagcatgtcaacgctttttc
cgtgatgggctcacaatttcctttacaaaaattctaacagacgaggctgtgagtggttgg
aaatttgagatccatcgatgtattataaacaatactcatcgcctcatagaactgtgtgtg
gccaagctatcccaggactggtttccccttcttgaactccttgctatggccttaaatcct
cactgcaagtttcatatctacaatggtacacgtccctctgagactgttcctgctggagtc
cagctggctgaggatgaactctttgcacgtcctcctgacccacgctcacccaagggctgg
cttgtggatcttatcaacaaattcgggacattaaatggttttcagattctacatgatcga
tatgtcagtggttcagcattgaatgttcagataattgcagctctcatcaaaccatttgga
cagtgttacgaattccttaccctacatacggtgaagaaatatttccttccaataatagaa
atggttccccagtttcttgaaaatctaacagatgaggagctgaaaaaggaagcaaagaat
gaagccaaaaatgatgctttatccatgataatcaaatcattgaaaaacttagcttctcgg
gttcctggacaggaggaaactgtcaaaaatttagaaatatttagattaaaaatgatactg
aggttattacaaatctcatcttttaacggaaaaatgaatgcactaaatgaagttaacaag
gtgatttccagtgtctcttattatacacatcgccatggcagtcctgaagaagaagaatgg
ttgacagcagagagaatggcagagtggatccaacagaataatatcttgtcaattgtactg
cgtgacagtctgcatcaaccacaatatgtggaaaaactagagaagatacttcgctttgtt
attaaagaaaaagcactcaccctccaggatctcgacaacatttgggcagcgcaggctggt
aaacatgaggcaattgtgaagaatgtccatgatcttcttgcaaaattggcttgggatttt
tctcctgaacaactagaccacctctttgattgctttaaggcaagttggacaaatgcaagt
aaaaagcaacgtgaaaagttgttggaactcatccgtcgccttgctgaagatgacaaagac
ggtgtgatggcacataaagtgttaaacctcctgtggaatttagcacacagtgatgacgtg
cctgttgatattatggatcaggctcttagtgcacacatcaaaatcctggattacagctgt
tcacaggatcgcgacacacaaaagatacagtggatagatcgttttgtggaggagttgcgt
actaatgacaagtgggtaattcccgcactgaaacagattagagaaatctgcagtttattt
ggagaagcaccgcagaatttgagtcagacgcaacgaagtcctcatgtgttctatcgtcac
gacttgattaaccagcttcagcataatcattcgctggtcactttggtagctgaaaacctc
tcagcatacatggagaatatacggcagtttcacaaagagaacccagaatatgatccacag
acggtgcagccaagtagtcgatacagccatgtacaagaagttcaagaacgacttaatttc
ttgagatttttattgaaggatggccaactgtggttgtgtgctcctcaagccaagcagatc
tggaagtgtttggcggaaaacgcagtctatctttgtgatcgtgaagcttgtttcaagtgg
ttttccaagttgatgggagatgaacctgatttggacccagacataaataaggacttcttt
gaaaataatgttctgcaactggatccttccctcctaacagaaaatggaatgaagtgcttt
gagcgatttttcaaggctgtaaactgtcgagaaggaaagcttgtagccaagcgacgtgct
tatatgatggatgacctcgaattgataggactggagtatctgtggagggtcgtaattcaa
ggaagtgatgacattgccagtcgagctatcgacctgttaaaagaaatatacaccaatctt
ggaccaaggttgcaggttaatcaggtagagattcatgaagacttcattcagtcatgtttt
gatcgactgaaggcctcgtatgacacattgtgtgtacttgatggtgacaaagacagtatt
aattgtgcaagacaagaagcaatacggatggtgcgtgtattgactgtgttgcgggagtac
atcaatgagtgtgacagcgactaccatgaggagcgaactattctacccatgtctagagca
tttcgtggaaaacatgtctcacttgtagtacgttttccgaatcaaggacgtcaggttgag
gatttggatatttggtcacacacaaatgataccattggctcagtcaggcgttgtatcctc
aatcgaataaaagccaacagcgcgcacacaaaaatagaattgtttattggtggtgaactt
gtagaccctgctgatgatcgaaaattaattggacagttgaatctgaaagataaaacactt
attacagccaagctaacacagataagctccaatatgccttcaagccctgatagttcttct
gattcctcaactggctcccctggaaaccatggtaaccactacagcgatggccctaatcca
gaagtagaaggctgtttgcctggagtgataatgtccttgcaccctagatacatttccttc
ctttggcaagttgcagatctgggcagcagcctaaacatgccacagttgagagatggtgct
cgtatccttatgaaacttatgcctcctgataacactacagtagaaaaactgcgtgctatc
tgcttagatcacgcgaagcttggtgaaagcagcctcagtccaactcttgattccctcttt
tttggaccatctgcctcacaagtgctgtatctaactgaggtagtatatgccttgttaatg
cctgccagtgcacctctgggggaagacgcaagtgattttcagtacaattttttaaaaagt
ggtggtgtgtccctcgtgctgggaatgctcaccaggaataatttcctcctaaatgcggat
gtggagactcgcagggctgcctatcttaatgcactaaaaatagccaaagtattactcacg
gcagttggatatggccatgtcagagctgtagccgaagcctttcagccagttgtggagggt
tcaagcactgtttcaccgataaatcatgctactcatagccaggctgtagttctgcagaat
gctctgcacaacattcccaatcccacttcagaatgtatgttgcgaaatgtagctattcgc
cttgcacagcaaatatcagatgaggcctcaaaatatatcccagacatctgtgttatccga
gcagttcaaaaaattgtctgggcctcgggttgcggttcgatacagcttgtattcagttca
agtgaagatatcagcaagatttatgaaaagactaatgcagggaaggagccagattcagaa
gatgaacatgtttgctgtgaagcactggaagtcatgacgctttgttttgcactggttcca
acagcgctggatacacttagtaaagaaaaggcatggcaaaccttcatcattgatttgcta
ctgcactgccacagcaaagctgtaaggcaaatggcccaggagcagttcttcctgatggct
accagatgctgcatgggacatcgacctctccttttcttcattactctgctcttcactgta
ttggcaagcacagcaagagagagagcaaaacattcagcagactacttcacgttattgaga
catttgcttaattacgcctataatagcaacatcaacttaccgaatgcagaagttctgctc
aacaatgaaattgattggctgaagaggattcgggatgaagtaaaaagaacaagtgaaacg
ggtgtcgaagaaaccatcctggagggtcatcttggagtcacaaaggagctgctggctttc
cagacacctgaaaagaaatatcatataggttctgaaaaaggaggagctaatctcattaag
gagctgatagatgattttatcttcccagcctccaatgtgtatctacagtataagaagagt
ggggagttgccatctgagcaggccattcctgtttgtagtacgccagctaccatcaatgct
ggttttgagctgctggtagcgttaactgttggctgtgtgcaaaacctaaaacaaatcgtt
gacactctgacagatatgtattatgcaggttgtgaagcattaacagagtgggagtacttg
ccaccagtcggaccacggccttcaaaaggatttgtaggattaaagaatgctggtgcaact
tgctacatgaattctgttatccagcaactgtacatgataccagctatcagaaatggtata
cttactactgaaggcactggcagtgatgttgatgatgatacatctggtgatgagaaacaa
gataatgagagcaacatagatcccagagatgatgtttttagttaccatcaccattatgac
aaacctgtaataggaaaaactgaagatcggaaagagtataatattggcgtcctcaggcac
cttcaagtcatctttggacatttggctgcctccagattacagtactatgtgcctagaggt
ttctggaagcagttcaggctttggggtgaaccagttaaccttagagaacaacatgatgct
ttagaattcttcaactctcttgtggacagcttggatgaagctttgaaagctcttggacaa
cctactatgctaagcaaagttcttgggggttcatttgctgatcagaagatatgtcaaggc
tgtcctcataggtatgagtgtgaagaatccttcacaacgttgaatgtagacattagaaac
catcaaaacctgcttgactcacttgaacaatatgtgaaaggagacttgttggagggcgcc
aatgcataccactgtgagaaatgcaacaaaaaggtggacacagtaaagcgtttgctaata
aagaagctgccaccagttttagcaattcaactgaaacgatttgactatgactgggaaagg
gaatgtgcaatcaaattcaatgattattttgagtttccacgggagctggatatggagcct
tatacagttgcaggtgttgccaagttggaaggggatgatatcaatccagaaaatcaggtg
atccaaaatgaccagccagataatgaacagcctggtagcacgaaatacagactagttggt
gtcttggtgcacagtgggcaagccagcggtggacattactattcttacatcattcagaga
aatggtggagatggtgagaagaacaaatggtataagtttgatgatggtgatgtaactgag
tgcaaaatggatgacgacgaggagatgaaaaaccagtgttttggtggagaatatatgggt
gaagtcttcgaccatatgatgaaacgtatgtcatacaggcgacaaaaacgatggtggaat
gcctatatacttttctatgaacgtatggatacaatagataaagatactgagttagttaaa
tacatttccgagctggagattaccattaaaccacaccagataaagatgccaagcgtcata
gagcgaagtgttcggaagcagaatgtacaattcatgcacaaccgaatgcagtatagcctg
gagtacttccagtttatgaagaaactactgacctgtaacagtgtctacctgaatccacca
cctgggcaagatcagctgttgcctgaagctgaagaactggctatgataagtattcaactt
gcggcaaggttcttgttcaatacagggtttcatacaaagaaaattgtccgtggtccagca
agcgaatggtatgatgcattgtgtatcctgctccgccacagcaagaatgtacgctattgg
tttgcacataatgttctttttgcccacccaaatcgcttctctgagtaccttctggagtgc
cctagtacagaagtgaggagtgcttttgctaagctcattgtatttattgcacatttctct
ttgcaagatggaccatgcccttccccctttgcctccccaggaccttccagtcaggcttat
gataatttaagtctcagtgatcatcttcttagagctgttctaaatctactgagacgagag
gtatctgagcatggaaggcacttgacacagtacttcaacctttttgttatgtacgccaat
ctgggggtggctgaaaagacacaattgctaaaactgaatgtgcctgcaacatttatgctt
gttgctttggatgaaggcccaggtcctcctattaaataccagtatgctgaacttggcaag
ctttatgctgtggtgtcacagttagttcgttgctgtgatgtatcatcacgcatgcaaact
tcaattaatggaaatccgcccctgtcaaacccctacggtgatcctaacctgtcccagcct
ataatgactatccagcagagtgtggcagacatcctgtttgtacgaactagttatgtgaaa
aagattattgaagactgcagcaattctgaggagaccatcaaactacttcgcttctgctgc
tgggagattccacagttttcttccactgttctgagtgaactcctctggcaggtggcatat
tcttatacttatgagcttagaccctacttagatcttctgctgcaaattttgctaatagag
gattcttggcaaacccacaggattcataatgccttaaaggggattcctgatgacagggat
gggctgtttgacaccattcagcgttctaaaaaccactatcagaagagagcgtatcagtgt
attaaatgcatggtagccctcttcagttcctgtcctgtagcctaccagatcctccagagt
aatggagacctgaaaaggaaatggacgtgggcagtagagtggcttggagatgagctggaa
cgtcggccgtatgctggaaatccacaatatacgtacaacaactggtcaccccctgtacag
agcaatgaaacatcaaatggttacttcctggaacggtcacacagtgccaggatgacactt
gcaaaggcctgtgagctgtgccccgaagagggaacatctcaggtgatatcagccacagaa
acattggcaagcagcttaataggagtctcgcaggagccagatgagcaagaagcaccagat
gatcacgattcttcccctccagaagatgccccattatacccccattcacccagctcccag
tatcaacagaccaccaaatag
DBGET
integrated database retrieval system
