Callorhinchus milii (elephant shark): 103184063
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Entry
103184063 CDS
T03088
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03030
DNA replication
cmk03410
Base excision repair
cmk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103184063 (pole)
03410 Base excision repair
103184063 (pole)
03420 Nucleotide excision repair
103184063 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmk03032
]
103184063 (pole)
03400 DNA repair and recombination proteins [BR:
cmk03400
]
103184063 (pole)
Enzymes [BR:
cmk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
103184063 (pole)
DNA replication proteins [BR:
cmk03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
103184063 (pole)
DNA repair and recombination proteins [BR:
cmk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
103184063 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
Spidroin_N
Motif
Other DBs
NCBI-GeneID:
103184063
NCBI-ProteinID:
XP_007900102
LinkDB
All DBs
Position
Unknown
AA seq
2283 aa
AA seq
DB search
MVLQNSGRLRAERGESADSPDDGSALSALKRLERSQWTDQMDAQFGFDRLKDPGEKTAWL
INMHPTDILDEDKRMISAVDYYFIQDDGNRFKVALPFQPYFYVATKXGYEREVSSFLSKK
FQGKLSKISTVPKEDLDLPNHLVGLKRQYIKLAFNTVDDLVKVRKDISPAVRKNKEREKS
NDAYTAMLSSALAGGSMAEAEGTSKKIADQMENIIEIREYDVPYHVRVSIDLKIHVAHWY
NIRIRGGAYPPEIIRRDDLVERPDPVVLAFDIETTKLPLKFPDAENDQIMMISYMIDGQG
YLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEQDEASLIRRWFEHIQEIKPNIFVTYNG
DSFDWPFVETRAAVHELNMYKEIGFQKDSQGEFKASQSIHMDCYRWVKRDSYLPVGSQNL
KAAAKAKLGYDPVELDPEDMCRMATEEPQTLATYSVSDAVATYYMYMKYVHPFIFALCTI
IPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQVFNKLTNDGHVLDSETYVGGHV
EALESGVFRSDIPCRFKMNPAAFDFLLQRVESTMRHAIEEEENIPLDQITNFQEVCDEIK
KKLNSLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEVICAACDFNKPGANCQ
RNMTWTWRGQFMPATRSEYHRIQQQLESEKFPPMFPNGRPQAFHALNREEQAKYEKKRLA
DYCRKAYKKIHNTRIEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAATE
CCDAAEIKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCHTGANIIT
QARELIEQIGRPLELDTDGIWCVLPNSFPENFVVQSNNPKKPKVTVSYPGAMLNILVKER
FTNEQYQELVDPATLTYIARSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGS
LAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSKAANM
PDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRFVISKKP
EGSPVTERAIPLAIFQAESSVKKHYLRKWLKCASLQDLDIRLILDWDYYIERLGSAIQKI
ITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKINELFTNTGVRQITTNQQVENT
QQSEIGDMEDFGVPKRRVQPAIPISTKRRRGPTDESQEESQDLELTQSWREILGPPPPLG
TTKDERLVWLRYHKKKWELQARQRKERRKRRKLDGGEAAIGRPIRDGPATSLSSFLRRTA
RTILDMPWQIVQIAETSHPGLFKLWAVVGSDLHCIKLNIPRLFYVNQRIPKAEDGAVFKK
VSRILPRSNIVYNLYEYAVPEDMYQEHINEINADLSAPDIEGVYETQVPLLYRALVQLGC
VCMVSRQLSRHLIGREKDTFDLEQLEMRSLAQFSYLEPGSVRHIYLYHNAQGNKALFGLF
IPSQRKASVFVLDTVRSNQMPNLTNLYTAERTAMLEKLDEELLPPDKHTFEVQAEKDPKQ
IYRAIQRLLLNYKDERRGPTLIAIQSKWDLKRLVNGMLVLDDFPLVPVHVVDDINYSVLD
WQRQGVRRMIRHYLSLDSVLSKAFEMARYYHIPIGNLPDDISIFGSDLFFSRHLRRHNHL
LWLSPTSRPDLGGKEADDSRLVMEYDERSAVEINNPDCYSTVCVELDIQSLAVNSILQSH
HVNDMEGASSIGVSFDVIQQASLEDMMSGNQAANALASYDETALCSNTFRILKSMVVGWV
KEITHYQNVYADNQVMHFYRWLRSPSSLLFDPALHRTLHNMMKKLFLQLVAEFKRLGSSV
VYANFNRIILCTKKRRIEDAIGYVEYITKSIHSREIFHSLSISFSRCWEFLLWMDPANFG
GIKGKLPSSVLWGEVGKENEPKEQVTEEDSEDEDEEEVHSEVEEGVTDVEDLLDNNWNIL
QFLPQAASCQSYFLMIISAYIVAVYHSMKEEMRRNAPGCTPIKRREASQTTQEPAGEAGA
LAGMITFSQEYVSNELTQNFFTITQKIQKKMSGTRNATQPSETFPLLPGSYLPLNNPALE
FIKSVCKVLSLDSKITNQVNKLKRDLLRLIDIGEFSEEAQFKDPCQSYILPEVICKNCNF
CRDLDLCKDPSILQDGTVLPKWCCTNCQAEYDSDAIEMGLVEALQKKMMAYTLQDLICSK
CKGIKEANMPIYCTCARDFDLTFSVKGFAEQIQVFRNIARHYSMPVLQDTVDWMFQMNPH
MRT
NT seq
6852 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgcagaacagcgggcgcctgagagccgagcgcggcgagagcgcggacagccct
gacgatggttccgctctttctgcactcaagcgcttggagcgcagtcagtggaccgatcag
atggatgcacaatttggatttgatcgtctgaaagatccaggagagaagacagcctggctc
attaacatgcacccaacagatattctggatgaggacaagagaatgatcagtgctgtagat
tattatttcattcaggatgacgggaacagattcaaggttgctcttccttttcagccatac
ttctacgttgctacaaaaangggctatgagcgagaggtttcatcattcctatctaagaag
tttcaaggcaaattaagcaaaatctcaaccgtccccaaagaagacttggatctgcctaat
cacctagttggcttgaagaggcagtacattaagctcgcctttaacacagttgatgaccta
gtgaaagttcggaaggatatttcccccgctgtaaggaaaaacaaagagcgtgaaaaatca
aatgatgcctatactgctatgttatccagcgcactggctggggggagcatggcagaagca
gaaggaacgtctaaaaagattgccgatcaaatggaaaacataattgaaattcgagaatac
gatgtgccttatcatgtccgtgtgtccatcgacctgaagattcatgtggcacattggtat
aatatcagaatccgtggaggtgcatatcctcctgagatcatacgcagggatgacttagtt
gaacgaccagatcctgttgttctggcttttgatatagaaactaccaaattgccactgaag
tttccagatgctgaaaatgaccagattatgatgatctcctacatgattgatggacagggt
tatctgatcacaaaccgggagattgtgtctgaagatatcgaagattttgaatttaccccc
aagcctgaatatgagggtcctttctgtgtgtttaacgaacaagatgaggccagtttaatt
cggagatggtttgaacatatccaagaaattaaacccaatatatttgtgacatacaacggt
gattcttttgattggccctttgtagaaactcgggcagcggtgcatgaattgaacatgtat
aaggaaattggctttcagaaggacagccagggcgaatttaaagccagtcagagcattcac
atggactgttacaggtgggtgaagagagacagctacttgcctgtaggcagtcaaaacctt
aaggctgcagccaaggccaaactgggctacgaccctgtggagctggaccctgaggatatg
tgtcgaatggccaccgaggagccgcagactctagccacgtactcggtgtctgatgctgtg
gcaacttattatatgtacatgaaatatgtacacccctttatttttgccttgtgcaccatc
attcctatggaaccagatgaggtgttgaggaagggttctgggacactgtgcgaggcactc
ctaatggttcaagccttccacgctaacatagtctttccaaataagcaagagcaggtcttc
aataagctgacaaatgacggtcatgtccttgactctgagacctatgtgggaggacatgtg
gaggctttggagtccggtgtcttccggagtgatattccttgtagattcaaaatgaatcca
gcagcttttgatttcttgcttcagagagtagagagcaccatgcgacatgccatcgaggag
gaggagaatatccccctggatcaaatcaccaatttccaagaggtgtgcgatgagattaaa
aagaagctgaattccttgaaggaagttcccaacaggattgagtgtccccttatttaccat
ttggacgtgggtgcaatgtaccccaacatcattctgaccaaccgcttacagccttctgct
atggtagacgaagtcatctgcgcagcctgtgacttcaataaaccaggagcaaactgtcaa
cgcaacatgacttggacatggaggggacagtttatgccagccactcgcagcgagtatcac
cgcatccaacagcagcttgaatctgaaaaattccctccaatgttcccgaacggcaggcca
caagccttccatgcgctaaaccgcgaggagcaggccaagtatgaaaagaagcgattggca
gactactgtcgcaaagcgtacaagaaaatccacaacacaagaatagaggaacgggtaacg
acaatttgccaacgtgagaactctttctatgtggacacagtgcgagcattccgtgacaga
cgttatgagtttaaaggcttgcataaggtgtggaagaagaagctctctgcagccactgag
tgttgtgatgctgcagagatcaagcgctgtaagaacatggagatcctgtatgaatccctg
cagctggcacacaagtgtatcctcaactccttctatggctatgtcatgcggaaaggggcc
cgttggtattcgatggaaatggccgggattgtttgtcatacaggcgctaacatcatcacc
caagccagggaactgatagaacaaattgggaggcccttggagctggacacggatggcatt
tggtgtgtgcttccgaactctttcccagaaaattttgttgttcagtcaaataatcctaaa
aagccaaaggttacagtctcctaccctggagccatgctcaacatcctggtgaaggagcgc
tttactaacgaacagtaccaagagctggtagatcctgcaactctgacctacatcgcacgc
tcagaaaacagtatcttctttgaggtggatggtccatacttggccatgatcctaccagcc
tccaaagaggaagggaagaagttaaagaaaaggtatgctgtgttcaacgaggatggctca
ttggctgagctgaaaggctttgaggtgaaacgccgtggtgaattgcagctcatcaaaatt
ttccaatcctctgtgtttgaggcctttctgaagggcactacactggaagaagtatatgca
tctgtggccaaagtagcagattattggctggatgttctctacagcaaggctgccaacatg
ccagactctgagctctttgagctgatctctgagaatcgatcaatgtcgcgcaaactggag
gattatggtgagcagaaatccacctcaatcagcacagctaaacgactggccgagtttctg
ggggatcagatggtgaaggatgcagggctgagctgccgttttgtcatctccaagaaaccg
gaagggtcaccggtgactgagcgagcaattccactggccatcttccaagcagagtcgagt
gtgaaaaagcactacctgagaaaatggctgaagtgtgcctccttacaggacctggacatt
agattaatcctagattgggattattacatcgagcgacttggcagtgccatccagaagatt
atcaccatccccgcagcccttcagcaggtgaagaatccagttcctcgggtgcgccatcct
gactggctgcataagaaactgctggagaagaatgacatttacaagcaaaagaaaatcaac
gaactgtttacgaacactggggtccggcagataaccactaatcagcaagtggagaacacc
cagcaatcagagattggtgacatggaagacttcggtgttcccaagcgccgggtgcagcca
gctatccccatcagcaccaagcggcgacgtggtccaactgacgagagtcaggaagaatct
caggacctggaactaactcaatcctggagggagatattgggacctccacctcccctggga
accacaaaggacgagcgactagtgtggctgaggtaccacaaaaagaaatgggagctacaa
gccaggcaaaggaaggagcgcaggaagaggagaaagctggacggtggcgaggctgctata
ggaagaccgattcgagacggtcctgcaaccagcctcagcagcttcctgcgtcggaccgcc
cgcaccattctggacatgccgtggcagattgtgcagattgcagaaacaagccaccccggt
ctcttcaagctgtgggctgtggttggaagtgatttacattgcatcaaactcaacatcccg
cgattattttacgtcaaccaacgaatccctaaagcagaggatggtgctgttttcaagaag
gtcagccgtatcctgccccggtccaatatagtttacaacctgtatgagtatgccgtgcca
gaggacatgtaccaggagcacattaatgagatcaatgctgacctttctgctccagatatt
gaaggagtctatgaaactcaggttcccttgttgtatcgtgctctggtacaacttggctgt
gtctgtatggtcagtagacagttgtcacgtcaccttatcggtcgagaaaaggacaccttt
gatttggagcaactggaaatgcgatccttagcacaattcagttacttggagccaggcagt
gtccgacatatctacttgtaccacaacgctcaagggaacaaagcgctctttgggttgttc
atcccctctcagaggaaggcttcggtgtttgttcttgacactgttcgtagtaaccagatg
ccgaacttgacaaacctatacacagccgagcggacagccatgctggagaaactggatgag
gagcttctgcctcctgacaagcacacctttgaggttcaagcagaaaaggacccaaaacaa
atctacagagcaattcagcgactactcctgaactacaaggatgagagaagaggtccgacc
ctcatagcgattcagtccaaatgggacctgaagaggctggtcaatggaatgcttgttctg
gatgattttccactagtgcctgttcatgtggttgatgacatcaactatagtgtgctggat
tggcaacgccaaggggtgcgcagaatgatcagacactacctcagtctggacagtgttctt
tctaaggcatttgaaatggccaggtattaccacattcccattggaaatctcccagatgac
atctccatctttggctcagacctctttttctccagacaccttcgccgacacaaccaccta
ctgtggctttccccaacctcccgccctgacctggggggcaaggaggcggatgatagccgc
ctggtgatggagtatgatgagagatcagcggtagagatcaataatccagactgttactcc
acagtttgtgtggagctggacattcagagcctggcagtgaactccatccttcagtctcat
catgttaacgacatggaaggagcgtccagcattggtgtcagcttcgatgttattcagcaa
gcttcactcgaagacatgatgtcagggaatcaggccgccaacgcactggctagttacgat
gagacagccctctgctccaacaccttcaggatccttaagagcatggttgttggctgggtg
aaggaaatcactcactatcagaacgtgtatgcagataaccaagtcatgcacttttaccgc
tggcttcggtctccttcctcactgctgtttgatcctgctctacaccgcacactccacaac
atgatgaagaaactcttccttcagctggtagcagagtttaagaggttgggctcatctgtg
gtctacgctaacttcaacagaataatcctgtgcacaaaaaagcgtcggattgaagatgca
attggctatgtggaatacatcacaaagagcattcattcccgtgagattttccattccctc
tccatctctttttctcgctgttgggaattcctgctatggatggacccggctaacttcggt
gggattaagggcaagcttccctccagcgtactctggggagaggtgggcaaggaaaatgaa
ccaaaggagcaggttaccgaagaggacagtgaggatgaagatgaggaagaagttcattct
gaggtggaggaaggtgtgactgatgtggaagatctgctagacaataactggaatatcctc
cagtttctgccacaagcagcctcctgccagagttatttcctcatgatcatctcagcttat
attgtggctgtctaccacagcatgaaggaggaaatgaggcgcaatgccccagggtgtact
cctattaaacgacgagaggccagccagactacacaggagcctgcaggagaggctggtgca
ttagcagggatgattaccttctctcaagagtatgtatctaatgagctcacacagaacttc
ttcacgatcacccagaagatccagaagaagatgagtggcacacgaaatgcgactcaaccc
tctgaaacgttccccctcctgcctggctcctacctccccttgaacaacccagcacttgag
ttcatcaaatcagtctgtaaggtcctgtctctagattctaaaataactaatcaagttaac
aagctgaagcgggaccttctgcgactaattgacatcggggaattctctgaggaagcccag
tttaaagacccctgccaatcctacatattgcccgaagtgatctgcaaaaactgcaacttt
tgccgagacttggatctctgcaaagatccctcgatcttgcaggatggcacagttttacca
aagtggtgctgtacaaactgccaagccgaatacgactctgatgccatagaaatgggactg
gtcgaagcattacaaaagaaaatgatggcttacactctccaggacttgatttgttcaaaa
tgtaaaggcattaaggaagccaacatgcccatttactgtacctgcgcacgggattttgac
ctgacattttcagtgaagggattcgcagagcagatccaggtgttcagaaacatcgcccgg
cactacagcatgccagtcctacaggacacggtagactggatgtttcagatgaacccacat
atgaggacgtga
DBGET
integrated database retrieval system
