Callorhinchus milii (elephant shark): 103184088
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Entry
103184088 CDS
T03088
Name
(RefSeq) rab5 GDP/GTP exchange factor-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
103184088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmk04131
]
103184088
Membrane trafficking [BR:
cmk04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
103184088
Protein recycling
Other Rab GTPase associated proteins
103184088
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Nuf2
Motif
Other DBs
NCBI-GeneID:
103184088
NCBI-ProteinID:
XP_042193453
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MSVKVGLRGIHVDRSELLCKDGCGYYGNLAWQGYCSKCWRERSPRQQPRPELSREPESGA
VSGITFSKFEEKKSSEKGRRVSTVRKLFASKIGSKRGNLEPATPGAHTSASIRPGDFNEF
LKSLRKPSEQIVQKRCLHFIHRLQATADLRVQAQSDLVQDFYQNITSHFTGQSLEHTERM
MDNVEKFIMTRLYCSVFCPDDSEDEQQDLVLQRRIRSLHWVTLQLLQVPLTERSEVTEHL
DSAITAIIEVDAKRAPQDKLACVSRCSRHIFSGLRVSSQEPAAADDFLSSLIYVVLKANP
PRLQSNIQYIVRFCHPKRLMTGEAGYYFTNLCCAVAFIEKLDGPSLNLTHEEFAEYMHGR
GKAAAPKPERPLPDGAGPGVRRMHRNLQLLAELSARQERILRNARELESELLEWTRSVRE
EVEETIRKFPLHIKRAG
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgaaggtgggcctgcgagggatccacgtggaccgctccgagctgctgtgtaag
gatggctgcggttactatgggaacctggcctggcagggatactgctccaagtgctggaga
gaacgcagcccgagacagcaacccaggccggagctgagccgagagccggagtccggggct
gtgtcgggcatcaccttctctaagttcgaggagaagaagagcagcgagaagggccggaga
gtcagcaccgtcaggaaactcttcgcctccaagatcggatccaaacgagggaatctggag
ccggccacgcccggcgctcacacctccgcctccatcaggcccggggatttcaatgagttt
ctcaagtcgctacggaaaccgtccgagcaaatcgtccagaagcgctgcctccacttcatc
caccgactacaggcaacggcggatctccgtgttcaggctcagtctgacctggtgcaggat
ttctaccagaacatcaccagccactttaccggccagtctctggagcacacggagaggatg
atggacaacgtggagaagtttatcatgacgaggctttactgcagtgtgttctgcccggat
gactccgaggacgagcagcaggacctggtgctgcagcgtcgcatccggagcctccactgg
gtgacgcttcagctactccaggtgcccctcaccgagaggtcggaggtaaccgaacacctg
gactccgccatcacagcgatcatcgaggtggacgccaagcgagcgcctcaggacaagctg
gcctgcgtctcccgctgcagccgacacatcttctccggcctccgagtctccagccaggag
ccggccgcggccgacgacttcctgtccagcctgatctacgtggtgctgaaggccaaccct
ccccggctccagtcgaacatccagtacatcgtccgcttctgccaccccaaacggctgatg
acgggcgaggccggttattacttcaccaacctgtgctgcgctgtggctttcatcgagaag
ctggacggtccctccctcaacctgacgcatgaggagtttgccgagtacatgcacggtcgc
gggaaagcggcagcgccgaagccggaacgcccgctcccggacggagcgggtcccggcgtc
cggagaatgcaccggaacctccagctgctggcggagctgagcgcgaggcaggagcgcatc
ctgagaaacgccagggaattggagtccgaactcctggagtggacgcgctccgtcagagag
gaggtggaagagaccatccggaaattcccgctgcacattaagcgggcgggatga
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