Callorhinchus milii (elephant shark): 103184121 Help Entry 103184121         CDS       T03088                                  Symbol rad50 Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism cmk  Callorhinchus milii (elephant shark) Pathway cmk03440   Homologous recombination cmk03450   Non-homologous end-joining cmk04218   Cellular senescence Brite KEGG Orthology (KO) [BR:cmk00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     103184121 (rad50)    03450 Non-homologous end-joining     103184121 (rad50)  09140 Cellular Processes   09143 Cell growth and death    04218 Cellular senescence     103184121 (rad50)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:cmk03032]     103184121 (rad50)    03400 DNA repair and recombination proteins [BR:cmk03400]     103184121 (rad50) DNA replication proteins [BR:cmk03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     103184121 (rad50) DNA repair and recombination proteins [BR:cmk03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      103184121 (rad50)     BRCA1-C complex      103184121 (rad50)    NHEJ (non-homologous end-joining)     MRX complex      103184121 (rad50) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_23 Rad50_zn_hook AAA_21 SbcC_Walker_B SMC_N AAA_15 AAA_24 AAA_29 ABC_tran AAA_16 AAA_22 Motif Other DBs NCBI-GeneID:  103184121 NCBI-ProteinID:  XP_007900169 UniProt:  A0A4W3JXU1 LinkDB All DBs Position Unknown AA seq 1312 aa AA seqDB search MSKIEKMSIQGVRSFGIDDRHKQVITFSTPLTVLVGPNGAGKTTIIECLKYICTSDFPPG TKGNTFVHDPKVAHETDVRAQIRLQFRDVNGETVAVQKSLLCTQKGKKIEFKTLEGLITR LRHGEKISLSSKCAEIDREMISALGVSKAVINNVIFCHQEDSNWPLSEGKTLKQKFDDIF SATRYIKALETLRQVRQKQAQRVRECQGELKYLKQNKEKAHEIRDQLTNKETQLAASKEN VQSIENQIDPLENRLLEIDQSLAKVIKVDNEIKALESRKKQMEEDNQDLEMKMEQVFQGT DEQLIDTYQNHQRTVSEKTRLVTDRQRELERVNQRCQKLNRQKSDMLVEQGRLQLLADRQ QENVKRRDALVRTLAGQLDLSGYERPPFSDRQYHGFRQQVEERLKIEQEAGNQLVNEFTE KDAAKQRQIDKVRDKKTGLERTIDLKLDIHRKKQLELNSVNVDLQQLEGSSDRLQELDQE LKKAERELERAEADSNVEGLRAEVTALQKEKGELDRSLRKLDQEMETLSFHTVTRTEMEV SKKDKANKEEQIRKIKSRHNDELVALLGHFPNKKQLEDWIHTKANEINSSREKLTKMTKD LASAEQNKNHTSAELKKKEQQLAQYEEKLFEVCGGQDFESDLYKLQDDIDKTSKQRAMLS GATAVYTQFISQLTEDNEPCCPVCQRIFPSEAELQDIVNDLQSKLRLVPDKLKATESELK RREKRRDEMMGLKPVRETVTELNERDLPELRNKLQNIIRDIQRLKCDVEEQETLQAAFIS EEGSAKQCLQDISLMDRYQMELRDVERKIAQQAAKLQGVDVSRTMQQVNQEKQEMQHKLE TVSSRVELKRKLIQDQQELIQSLKSSLNEVRAEKLQIASNMQRRQQLEEQSVELATEIES LHRDIREAKEQLSPLAAALEKLLKEKLDLMEKKTASCKEIQEKINDVKEKVKNIDWFAKE IQRYIQEKKDEFKEQKESELQETVTQLNEVEKQREKIQRDIEAFRKDIDTQKLEERWLQD NLTLRKRVEELRGVEAKRQDLLQQIGEMQVMQLKNERRQLDEKLEQLKDNRSLAHGRQKG FEEEILRFRKELKEQQYKDAEEKFREMMITIRTTELANRDLDIYYKALDQAIMKFHSMKM QEINKIIRDLWRSTYRGQDIEYIEIRSDADENVTAGDKRRNYNYRVVMVKGDTPLDMRGR YSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSNQR NFQLVVITHDEDFVELLSRSQYVEHFYRVKKNIEQCSEIIRCSVTSLNAHVQ NT seq 3939 nt NT seq  +upstreamnt  +downstreamnt atgtccaagattgagaagatgagcattcagggggtgaggagttttgggatcgacgacaga cacaagcaggttatcaccttctccactccgctgacggtgctggtgggacccaacggagcg ggaaaaacaaccataatcgagtgcctgaagtacatttgcaccagcgatttcccgcctgga acgaaaggcaacacgtttgtacatgatccaaaggttgcccacgagactgacgtgcgagcc caaattcgtctgcagttccgagacgtgaatggggagacggtggcggtgcagaagtcactg ctttgcacccagaaagggaagaagatagaattcaaaaccctggagggactgatcactcgc ctcaggcacggagagaaaatcagcctgagctccaagtgcgcagagatagacagggagatg atcagtgcactgggcgtttccaaagccgtgataaacaacgtcatattttgccaccaggaa gattcaaactggcctctgagtgaaggaaaaactctgaagcagaagtttgatgatattttt tcggccaccaggtacattaaggctttggagacgctacgacaagtacgccagaaacaggct cagcgagtccgagagtgtcagggagaactcaagtacctcaaacaaaacaaggagaaagcc cacgagataagggatcagctgaccaacaaagagacccaactggcggcctccaaagagaat gtccaatcgatagaaaatcagatcgatccattggagaatcgcttgctggagatcgaccag agcctggctaaggtgataaaagtggacaacgagatcaaagccctggagagtaggaagaag caaatggaggaagacaatcaagatttggaaatgaaaatggaacaggtcttccaaggaacg gacgagcagctgatagatacgtaccagaatcaccagagaacagtgagcgagaagaccagg ctggtgaccgatcggcagcgggagctggagagagtcaaccagaggtgtcagaaactcaac cggcagaagtccgatatgctggttgaacaggggcgacttcagctgctggctgatcgtcag caggagaacgtcaagagacgcgatgctttggtgcggacgttggcggggcagctggacctg agcggctacgagcgccctcccttcagcgatcgacagtatcacggcttccgtcagcaggtg gaagagaggctgaagatcgagcaagaggcgggaaaccagctggtgaacgaattcacggaa aaagacgcagccaaacaacggcagatcgacaaggtcagagacaagaagacgggactggag agaaccattgacctcaagctagatatccaccgcaagaaacagttggagctcaacagcgtg aacgtagatcttcagcagctggaaggatcttcggatagactgcaggagctcgatcaagag ctgaagaaggccgagcgggaactggagcgagcggaggccgacagcaacgtggagggtctg agggcggaggtgacggctctgcagaaggagaaaggagagctcgaccggtcccttcgcaaa ctggatcaggaaatggagacgctatccttccacaccgtaacgcgaactgagatggaggta tcgaagaaagacaaggcaaacaaagaggagcagatcaggaagataaagtcccgacacaat gacgagttggtggctctgttgggacatttccccaacaagaagcagctggaggattggatt cacaccaaagccaatgagatcaacagctccagagagaaactgactaagatgaccaaggac ttggcttcagcagagcagaacaagaatcacaccagcgctgagctcaagaagaaggagcaa cagttggctcagtacgaagagaagcttttcgaagtgtgcggaggccaagactttgaaagc gatctgtacaaactccaggacgatatcgacaagacgtcaaagcagagagccatgctctcg ggagccaccgctgtgtacacgcagttcatcagccaactgacggaggacaacgagccctgc tgcccggtctgccagcgcatcttcccttccgaggcggagttgcaagacatcgtcaacgac ttgcagtcaaagctccgtctcgttcccgataaactgaaggcgactgagtccgagctgaag aggagggagaaacgtcgggacgagatgatgggactgaagccagtcagggaaacagtgacc gagctgaatgaaagggacctgcctgagctgcggaacaagctgcagaacatcattcgcgac attcagcgtctgaagtgcgacgtggaagagcaggagacacttcaggccgccttcatatct gaggaaggctcggccaaacagtgtctacaagacatctcgctcatggataggtatcagatg gagctgagggacgtagagcgtaagatcgctcagcaggcagccaagctccagggagtcgat gtgagccgcactatgcagcaagtcaaccaggagaaacaggagatgcaacataagctcgag acagtctcgagccgggtggagctgaaacggaagctgatccaagaccagcaggagctgatc cagtcgctgaagagcagcctgaacgaggtgcgagctgagaagctgcagatcgccagcaac atgcagcggcggcaacagctggaggagcagagcgtggagctggccaccgagatcgagtcc ctccacagagatatacgcgaagccaaggaacagctgtctcctctggccgcagctttggaa aaactactgaaagaaaagctggatctgatggagaagaagaccgcgagctgcaaggagatt caagagaagataaatgacgtgaaagaaaaagtcaaaaacatcgattggttcgccaaagaa attcaacgctacatccaggaaaaaaaagatgaattcaaagagcaaaaggagtccgagctt caagaaacggtcacccaactaaacgaggtggaaaagcagcgagagaagattcagagggac atcgaggctttccggaaggacatcgatacgcagaaacttgaggagaggtggttgcaggat aatctgaccttgcggaaacgagtggaagagctgagaggtgtggaggccaaaaggcaggat ctactgcagcagattggagagatgcaagtgatgcaactgaaaaatgaacgtagacagttg gacgagaaactggaacagctgaaggacaatcgcagcctggctcacggacgccagaaagga ttcgaggaggagattcttcggttcaggaaggagctgaaagagcagcagtacaaagacgcc gaggagaagttcagagaaatgatgatcaccattagaacaaccgaactggccaacagagac cttgatatttattacaaagcactggatcaggcaataatgaaatttcacagcatgaagatg caggagatcaacaaaattatccgtgacctgtggaggagcacatacaggggccaagacatt gaatacattgagatacgttctgatgccgacgagaacgtgacggctggggacaagcggaga aattacaattaccgggtggtgatggtgaaaggcgacacgccactcgacatgagggggaga tacagcgcggggcagaaggtcctggcttccctcataatccgcctggctctcgctgagact ttttgtctgaactgcggaatactggctttggacgaaccaaccaccaacttagaccgggag aacattgaatcattggctcatgccctggtggagataatcaagagtcgatcgaaccagaga aacttccagcttgtggtcatcacccacgacgaggactttgtggagctgctgagccggtcg cagtacgtcgaacacttttatcgggtcaaaaagaacattgagcagtgctcggagatcatc aggtgcagtgtcacctctctcaacgcccacgttcagtga

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