Callorhinchus milii (elephant shark): 103184235
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Entry
103184235 CDS
T03088
Symbol
clstn1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cmk04515
]
103184235 (clstn1)
Cell adhesion molecules [BR:
cmk04515
]
Cadherins
Cadherin related
103184235 (clstn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
SID-1_RNA_chan
EphA2_TM
Cadherin_C_2
V_ATPase_I
PFF1_TM
TMEM132_C
Motif
Other DBs
NCBI-GeneID:
103184235
NCBI-ProteinID:
XP_042199440
LinkDB
All DBs
Position
Unknown
AA seq
980 aa
AA seq
DB search
MSPGKPELLTALLRFAFFLHLSLCGPVLTGKVNKHKPWIETTYHGIVTENDITVLLNPPL
IALDKDAPLRYAERFEVTFTKEGEICGFRIHGQDVPFEAVVVDKTTGEGVIRSKEKMDCE
LQKEYTFAIQAYDCGEGPDRGNMKKSHKANVHIQVNDVNEYSPVFKEKSYKATVIEGKKY
NSILRVEAIDADCSPQFSQICSYEIVTPDVPFTIDKDGYIKNSETLNYSKDRQYKLAVTA
YDCGKKRSTEDVLVKISIKPTCKPGWEGWSKRIEYEPGTGSLALFPTMRLETCGEPITSI
EANIELETSHIGKGCDRDTYSEKSLHRLCGASSGTIDLLPSPSSVTNWTVGLPTDNGHDS
DQVFEFNGTQAVKIPSGVLTTNLKEPFTISVWMRHGAGSSVRGEKETVLCNSDKTEMNRH
HFSLYVHNCRLVFLFRQNPSENENFRPAEFHWKLDQVCDKEWHHYVLNVDIPTVALYVDG
VSYDPFLVTEDYPLRHSKIETQLVVGACWQEFSGNENENETVTEAYPGGEFRMAQYFQGN
LAGLMIRTGKIESKKVIDCLYTCKEGLDLLDENLDNGVMVHFNPSQSVLGLEGDDLENFD
KSMQHVSYLNSRQFPTPGIRRLKITTTLKCFNEETCISVPDVEGYVMVLQPDEPKISVSG
IDHFARAASEFVSHEGVPLFPELKIVSTITREVEPEGEDEDEPTVQESMVSEEIMHNLDT
CEITVLGDELNPEEETLEVDQSQLQQRGMETSNSSTGMTVTGVDTMASYEEMLHLIRYRN
WNTETLFERKFKLVCSELNGRYTSNEFSVEVNVIHTANPVEHPNHLMAQPQFVHPVHHSS
VDLSGHNLANPHPSSVVPSAATIVIVVCVSFLVFMIILGVFRIRAAHQRTLSDQENGKEN
EMDWDDSALTITVNPMETYEDQHSSEEEEEEEEESEEGDEEDDITSAESESSEEEEGEQE
DQQNVNRQQQLEWDDSTLTY
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccggcaaacccgagctcctcaccgcgctgctccgcttcgccttcttcctccac
ctgagcctctgcggacccgtcttgacggggaaagttaacaagcacaagccatggatagaa
actacgtatcatggtattgtaacagaaaatgacatcacggtgctgctgaaccctccacta
attgccttggataaagatgcacctctgcgttacgcagagaggtttgaggtgacattcacc
aaagaaggtgagatttgtggatttaggattcacggacaagatgtccccttcgaagctgtg
gtggttgataaaaccactggggaaggtgtcatccgttcaaaggaaaagatggattgtgag
ctgcagaaagagtatacgtttgccatccaggcgtatgattgtggagagggtccagataga
ggaaatatgaagaagtcgcacaaggctaatgtccacattcaggtgaatgatgtgaatgag
tactccccagttttcaaagagaagtcctacaaagccacagtcatcgaaggaaagaaatat
aacagcatcttaagagtcgaagccatagatgcagactgctcacctcagttcagccagatt
tgcagttatgagattgtaactcctgatgtgccatttaccattgataaagatggctatatt
aagaactctgagacgctgaactacagtaaagaccgccagtataagctcgcagtgaccgcc
tatgactgtgggaagaagcgttcaactgaggatgttttggttaagatcagcattaaaccg
acatgcaagcctggctgggaaggttggagcaaaaggattgaatacgagcctggcactgga
agtttggcattgtttccaaccatgcgtttggagacatgtggcgaaccaattacatccatt
gaagcaaacattgagttggaaacgagccacatcggcaaaggatgtgatcgggacacgtac
tctgaaaagtcactccacagactctgtggggcttcctctggcacaattgatctcctccct
tcaccaagctctgttacaaattggacagttggccttcccactgacaatggccacgacagt
gatcaagtctttgagttcaatggcacccaggctgtgaaaattccttcaggtgtcctgaca
acaaacctcaaggaaccatttacaatttctgtttggatgcgacacggggctggttctagt
gtacgcggggagaaggaaactgtcctttgcaactccgacaaaacagaaatgaatcggcac
cacttctccctttacgtgcacaactgccgcctggttttcctcttccgtcagaatccttcc
gaaaatgagaacttccggcctgcagagttccattggaaactagatcaggtgtgcgataaa
gaatggcatcactacgtgctgaatgttgacattcccaccgtggctctctatgtagacgga
gtatcatatgatccattcctagtcactgaagattatccactccgacattcaaagattgaa
actcagttggtggttggagcatgctggcaagaattttcaggaaacgagaatgaaaatgaa
actgtgactgaagcctatccaggtggtgagtttcgcatggctcagtacttccagggtaat
ctagctggtttgatgattcgaactggtaagattgagagcaagaaggtgattgactgcttg
tacacgtgtaaagaaggattggaccttctggatgagaatcttgacaatggtgtaatggtt
cactttaaccccagccagtcggtgcttggtttggaaggggatgatcttgaaaactttgac
aagagtatgcagcatgtgtcgtaccttaattcccgtcagtttccaacgcctggaattaga
aggttgaaaatcaccaccaccttgaaatgcttcaatgaagagacatgcataagtgtccca
gatgtggagggttatgtgatggtgcttcaacccgatgaaccaaagataagcgtgagtggc
attgatcattttgcacgagctgcttctgaatttgtgagccacgaaggtgttccattgttc
ccagagctcaaaatcgtcagtaccattacccgagaggtggaaccagagggagaggatgaa
gatgagccaacagtccaagaatctatggtgtctgaggagatcatgcacaatctggatact
tgtgagatcactgtccttggggatgagctcaatccagaagaggagaccttggaggttgat
cagtctcagctccagcaaagaggcatggagactagtaactcctctaccggcatgactgtc
acaggtgttgacaccatggcaagctatgaagagatgctacatttaatccgttaccgaaat
tggaacaccgaaaccctatttgaaaggaagttcaaacttgtttgctcagaactaaatgga
cgctataccagcaatgagttcagcgttgaggtcaatgtgattcacacagctaatccagtg
gaacatcctaaccatttaatggcacagccacagtttgttcacccagttcaccattcttca
gtggacttgtcgggacataacctggcaaatccccacccgtcctcagtggtgcccagtgca
gcgactatagttattgtcgtctgcgtcagcttcctcgtctttatgatcatcctcggagtt
ttccgaatccgtgctgcacatcaacggacattgagtgaccaagaaaatgggaaggagaat
gagatggactgggacgattcagctttaactattacagtgaatcctatggagacgtatgag
gaccaacatagtagtgaggaagaggaggaagaagaggaggagagtgaggaaggtgatgag
gaagatgacatcactagtgcagaatctgaaagcagtgaggaagaggaaggtgaacaggaa
gaccagcagaatgtaaaccgacagcagcaacttgaatgggatgactctactcttacctat
tga
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