Callorhinchus milii (elephant shark): 103184259
Help
Entry
103184259 CDS
T03088
Symbol
prdm16
Name
(RefSeq) histone-lysine N-methyltransferase PRDM16 isoform X1
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk00310
Lysine degradation
cmk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
103184259 (prdm16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmk03000
]
103184259 (prdm16)
03036 Chromosome and associated proteins [BR:
cmk03036
]
103184259 (prdm16)
Enzymes [BR:
cmk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
103184259 (prdm16)
Transcription factors [BR:
cmk03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
103184259 (prdm16)
Chromosome and associated proteins [BR:
cmk03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
103184259 (prdm16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_11
zf-C2H2_6
zf-H2C2_5
zf-BED
zf-C2H2_8
zf-met
Motif
Other DBs
NCBI-GeneID:
103184259
NCBI-ProteinID:
XP_042199496
LinkDB
All DBs
Position
Unknown
AA seq
1069 aa
AA seq
DB search
MKDGVYPDGTMPPSLDEDQRYQCNDCDELFRSKLALRRHQKYSCHNADAIFTAINQEFKQ
SPLDELPLHECKDCDRIFPNEYSLEQHMIIHSEEREYKCDQCPKAFNWKSNLIRHQMSHD
SGKRFECENCDKVRCKVFTDPSNLQRHIRSQHVGARAHACPDCGKTFATSSGLKQHKHIH
SSVKPFTYRRQGQAWTQSNGEVCHKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMFSTTS
SLNKHRRFCEGKNHYSPGTMFPQGLSLTHSPLLDKSKPSSTLNHTPLPFSDYFPSRPHPA
TLPFSSPFHALAPGFPSLFPPSLYPRPQLLPSNPLLKSSLNHDLDRTLQSPLGTTPSMSQ
GSSLVSVFNERVVPPEEKSEVHSENSYTEKGKAKGSDVSEGSDFEDVNTTSGTDLDTTTG
TGSDLDSDVESDRDKKKEKGVPTAKPPDKLGLPPANANNERSYLPFQHSFFPPPDEQNLP
TGATNDSIKAIASIAEKYFGSGFMGMQEKKMASLPYHSMFPFQLLPNFPHSMYPFTDRNL
NPNLLVKNELKSPREFQKVVGPESPFDLTTKRKEVKVPPVPPGKHVTSSFPGEEQPLDLS
ISNRSRVSQNGPGEPRKNHVFGERKIMMSDGMPKIPHPQTLHYAKPSPFFMDPIYSRVEK
RKMIDPMNSVKEKYLRPNPLLFHPQMAAMETMTEKLESFGALKLDPMGVLQPPPHHAFNF
RSPPSALSDAILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISS
NLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKKHENESIPVSQHSGVSSNHLGTSA
SSPNSEPDNSALLEEKEDSYFSEIRNFIGNNDLSKASGSSEKRPEAQVTTSQQPGHPLTS
QKAEEADDEEEEEELEEEDEEEDESLTEKSQDDPVSPKVEVRAAFRETKEELPAPLTMGY
EHSRRCIAENEAGLLALEQTEPFTKGLDLRKAAEEQYQVKEAAIFNPTLDSEAIKETLYR
QAKTQAYAMMLSLSENNSLHPSSQNSLDAWLNMAGGAQETGTFHPINHV
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacggggtgtatcctgacggcacgatgccacccagcctcgatgaggaccagagg
taccaatgcaacgactgtgatgagctgttccggtccaagctcgccctccggcgacaccag
aagtattcgtgtcacaacgcagacgccatcttcaccgccataaaccaggagttcaagcag
agtccgctggacgagcttcccctgcacgagtgcaaggactgcgatcgcatcttccccaac
gagtacagcctggaacaacacatgataatccacagcgaagagcgggagtacaaatgtgac
cagtgccccaaggcctttaactggaaatccaatctgatccgtcaccaaatgtcacacgat
agtggtaaacgctttgagtgtgaaaactgtgataaggtaagatgcaaggtcttcacggac
cccagtaacctccagaggcacatccgatcgcagcacgtgggtgcccgggcgcacgcttgc
cccgactgcgggaaaaccttcgccacctcctcaggcctgaagcagcacaaacacatccac
agcagcgtcaaacccttcacctataggaggcagggacaagcgtggacacagagcaatggc
gaagtctgccacaaatcctacacccagttctccaacctttgccggcacaaacgcatgcac
gcagactgcaggacccagatcaaatgcaaagactgtggccaaatgttcagcaccacctcc
tcgctcaacaaacaccggcgcttctgcgagggcaagaaccattacagcccaggaaccatg
ttccctcagggcctgtctctcacccacagccccttgctagacaaatccaagccctcgtct
actctcaatcacacgcccttacccttcagcgattatttcccctcccgcccgcacccggca
accctgcctttctcctctcccttccacgctctcgctccgggcttcccgagcctctttcca
ccctccttgtaccctcgcccccagttgttgccaagcaatccgctcctcaaaagctcactg
aaccacgacctcgataggaccctccagagcccgctcgggaccaccccgtccatgtcacag
gggtcttcgctggtctcggtgttcaacgagagggtagtccctcctgaggagaagtccgag
gtgcactcggaaaactcctacacggagaagggcaaggccaaggggagtgacgtgagcgag
ggcagcgacttcgaggacgtcaacaccacaagcggcactgacctggacaccaccacaggc
accggctctgacctggacagcgatgtggagagcgaccgggacaagaagaaggagaagggc
gtccccacggccaagccaccggacaagctggggctcccgccggccaacgccaacaatgag
aggtcctatctcccgttccagcattccttcttcccgccaccggacgagcagaacctgccc
accggggccaccaacgactccatcaaggccattgcctccatcgccgagaagtactttggc
tccggcttcatggggatgcaggagaagaagatggcctcgctcccgtaccattccatgttc
ccattccagctgctccccaactttccacattccatgtacccattcacggaccgaaacctc
aaccccaaccttctggtcaaaaacgaactcaaatcccccagggagttccagaaggtggtg
ggccccgagtcgccctttgacctcaccaccaaacggaaagaggtcaaggttcccccggtt
cctcccggcaaacacgtgacgtcctccttccccggggaagagcagcctctggacctgagc
ataagtaaccggagccgggtcagtcagaacggaccgggggaacctcgcaaaaaccatgtg
ttcggggagcgcaagatcatgatgagtgacgggatgcccaagatccctcacccacagacc
ctccattacgccaagccctcgcctttcttcatggatcccatctacagcagggtggaaaag
aggaaaatgatcgaccccatgaactcggtaaaggagaagtacctgcgtccgaaccccctt
ctcttccaccctcagatggccgctatggagaccatgactgagaagttggagagctttggt
gcactgaagctggacccaatgggggtcctgcaaccccctccccaccacgctttcaacttc
cgatcgccgccctccgccctctcggacgcgatcctgcggaaaggaaaggagcgctacaca
tgcaggtactgtgggaagatatttccaaggtcggcaaacctgacccggcacctcaggacc
cacacaggggagcagccatacaggtgtaaatactgcgataggtcgttcagcatctcgtcc
aacctacagcggcacgtccgaaacatccacaacaaagagaaacccttcaagtgtcatctc
tgcaaccgctgcttcggccaacagaccaaccttgaccgtcacctcaagaagcacgagaac
gagagtattccagtgagccaacactccggggtctcatctaaccacctgggcaccagcgcg
tcttccccaaactccgagccggacaacagcgcacttttggaggagaaggaggactcgtac
ttctcggagattcggaatttcatcgggaacaacgacttgagcaaggcttctggttccagt
gagaaaaggcctgaggcgcaagtgaccacaagtcagcagccgggccacccgctgaccagc
cagaaggccgaggaggcggacgatgaggaagaggaggaggagctggaggaggaagatgaa
gaggaggacgagagcctgacggaaaagtcccaggacgatcccgtctcgcccaaggtcgag
gtcagagcagcgttcagagaaaccaaggaggagcttcctgccccactgacaatgggatat
gaacattcccgcaggtgtattgctgagaatgaagctggcctgttggctttggagcagaca
gagcctttcacaaaagggctggacctgcgcaaggcagcagaggagcagtatcaagttaag
gaggccgcgatctttaacccaaccttagactccgaagcaataaaagagacactgtacagg
caggctaaaactcaggcttacgccatgatgctctcgctctccgagaacaattcccttcat
ccgtcgtcgcagaattctctggacgcttggctgaacatggcaggaggtgcccaggagact
ggcacatttcacccaatcaatcatgtatga
DBGET
integrated database retrieval system
