KEGG   Callorhinchus milii (elephant shark): 103184331
Entry
103184331         CDS       T03088                                 
Symbol
sf3a1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103184331 (sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cmk03041]
    103184331 (sf3a1)
Spliceosome [BR:cmk03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    103184331 (sf3a1)
 Complex B
    103184331 (sf3a1)
 Complex C
   U2 SnRNP specific factors
    103184331 (sf3a1)
SSDB
Motif
Pfam: Surp PRP21_like_P ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 103184331
NCBI-ProteinID: NP_001279783
UniProt: K4FTT7
LinkDB
AA seq 777 aa
MPAGPVQALVPPPPPQSENQVPEETKDEIPTAKPIVGIIYPPPEVRNIVDKTASFVARNG
PEFEARIRQNEINNSKFNFLNPNDPYHAYYRHKVNEFKEGKGQEPSAAVPKVMQQQQLPQ
KVQAQVIQETIVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKEQ
RNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLILKLKREAENPKEVLDQVRYRVEWA
KFQERERRKEEEERERERVAYAQIDWHDFVVVETVDFQPNEQGHFPPPTTPEELGARILM
QERYEKFGESEEVEMEVESDDDVEETDDKPEEAPAQLDQDTQVQDMDEGSDDEDDGQKIP
PPPETPMPPPLPPTPDQVIIRKDYDPKASKPVPGAPALDEYLISPITGEKIPASIMQEHM
RIGLLDPRWLEQRERSIREKQSEDEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIG
EEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDTKEKIGPSK
PIDLHPLLSSSNPMNIPPLSSVPRPPSMPPPVRNTIVSSMSSMPIMPRPPMASVVRLSPL
ASQMSHMLHGSRISVLPMPQSASPMNPRPPPMVVPSGFVPAPPVNPAPLSSSLPRPPPPM
EDEPVAKKSKTEDNLIPEEEFLRRNKGPVTVKVQVPNMQDKSEWKLNGQVLTFTIPLTDQ
VSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNVIGGSVIHLAFKERGGRKK
NT seq 2334 nt   +upstreamnt  +downstreamnt
atgccggcggggccggtacaggcgctcgtccctcctccgccgcctcagtcggagaaccag
gtgccagaggaaactaaagatgaaataccaacggccaagcccatcgttggtatcatctat
ccccctccagaggtcaggaacattgttgacaagactgcaagtttcgtagctagaaacggc
ccagaatttgaagctcgtatccgtcagaatgaaatcaacaactccaaatttaatttctta
aatcctaatgatccataccatgcatattaccggcacaaagtcaatgagttcaaggaaggg
aaaggtcaggaaccttcggccgctgtgccgaaggttatgcaacagcagcaactaccacaa
aaggtacaagcacaggtaattcaagagacaattgtcccaaaagagcctcccccagagttc
gagtttattgctgaccctccctccatctcagcctttgatctggacgttgtgaaactcacg
gctcagtttgtggccagaaatggccgacagtttttgactcagttgatgcagaaggagcag
cgtaactatcagtttgactttttgcgaccacagcacagcttgttcaactattttaccaaa
ctcgtggagcagtacaccaagatcttaataccaccaaaaggtttaattctgaaattgaag
agagaagcggaaaatcccaaagaagttttagatcaggtcaggtacagagttgaatgggca
aagtttcaggaacgtgagaggaggaaggaagaggaagagcgtgaaagggagcgagtggct
tatgcacagattgactggcacgactttgtggtggtggaaacggttgacttccagccaaac
gaacaagggcacttccctccgccaactacccccgaagagctcggagctcgaatcttgatg
caggagagatatgaaaagtttggagagagcgaggaagttgaaatggaggtggaatccgat
gatgatgttgaagaaactgatgataaaccagaagaggctccagcacagttggaccaagat
actcaagtgcaagatatggacgagggctcagatgatgaagatgacggtcagaaaatacca
ccccctcctgaaactccaatgcctccaccgctcccccctactccagaccaggtcatcatc
aggaaggactatgaccccaaagcttccaaaccagtgcctggtgcacccgccctggatgag
tatctcatctctcccatcaccggtgagaagattcctgccagtataatgcaggaacacatg
cggattgggctattggatccccgctggttggagcagcgtgagcgttccatccgcgagaaa
cagagtgaagatgaagtgtacgcgccaggtttggatatcgaaagcagtttgaaacagctg
gctgaacgacgtaccgatatctttggtgtggaagaaaccgccatcggtaagaagattggc
gaggaagaaattcagaaaccagaggaaaaggtcacttgggacggtcattcaggcagcatg
gcccgtacacagcaggctgcacaagccaacatcactctacaggaacagattgaagccatc
cataaggccaaggggctggttccagaagacgacaccaaagagaaaattggacccagtaaa
ccaattgacttacatcccctgctttcttcatcaaatccaatgaatattccaccattgtca
tctgtacctcgaccaccttccatgcctccacctgtgcggaataccattgtctcctcaatg
tcatccatgcctattatgcccaggccaccgatggcttctgtggtccgtttatcaccttta
gcttcacagatgtcccatatgcttcatggctctcgaatcagtgttttaccaatgcctcaa
tcagcttcacctatgaaccctcgcccaccaccaatggtggtcccatcaggattcgtccct
gcccctcctgtgaatcctgctccactttcaagctccttacctcgcccaccacctccaatg
gaagatgagccagtagcgaaaaaatcaaaaactgaagacaaccttattccagaagaagag
tttctgcgacgaaacaagggtccagttacagtcaaagtgcaggttccgaacatgcaggat
aagagtgaatggaagctgaatggccaggtcttaacattcactatccctctaacagaccag
gtatctgttataaaggttaaaatccatgaagctacaggaatgcctgctggtaaacagaag
cttcagtatgagggaatcttcatcaaagattcaaactctctggcctactataatgtgata
ggtggctcagttatccatctggccttcaaagaaagaggaggtcgcaagaaataa

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