Callorhinchus milii (elephant shark): 103184778
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Entry
103184778 CDS
T03088
Name
(RefSeq) retinoic acid receptor RXR-gamma-A isoform X1
KO
K08526
retinoid X receptor gamma
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03320
PPAR signaling pathway
cmk04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
103184778
03320 PPAR signaling pathway
103184778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmk03000
]
103184778
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cmk03310
]
103184778
Transcription factors [BR:
cmk03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
103184778
Nuclear receptors [BR:
cmk03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
103184778
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
103184778
NCBI-ProteinID:
XP_007901150
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
MDDFWALRPTYDSAIQINSTSMNSPPPHSTLNSMVGHPSVIGSSLNLSRSLTSSMGSLNS
AMNGLGSPYSVITSSIGSPSVSVPSTPGIGFGALNSPQMNALNNVSSTEDVKPPMGLSGL
GNMNSYNQCSSASLAKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDSKD
CTIDKRQRNRCQYCRYQKCLASGMKREAVQEERQRGKERLDNEVESTSSVNDDMPVEKIL
DAELAVEPKTEAYVEASLGNSSNDPVTNICQAADKQLFTLVEWAKRIPHFSDLPLDDQVI
LLRAGWNELLIASFSHRSISVKDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKD
MQMDKTELGCLRAIVLFNPDAKGLTNPGEVESLREKVYASLEAYTKHKYPEQPGRFAKLL
LRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggatgacttctgggccctgcgtcccacgtatgactccgccatacagatcaactccacg
tctatgaactcgccaccaccacattcaactctcaactccatggttggtcacccgtcagtc
atcggatcctcgctcaacctctccagatccctgacctcctcaatgggcagcctgaactcc
gccatgaacggcctgggctccccctactctgtcataacctcctccataggctcgccctcc
gtttctgtgccctccaccccaggcatcggcttcggagcgctcaactccccacagatgaac
gcgctgaacaatgtgagcagcacggaggatgtgaagccgccgatgggcctgtcaggcctg
ggcaacatgaatagctacaaccaatgcagctctgcctcgctggccaaacacatctgtgcc
atctgtggtgatcgctcctcagggaagcactatggagtgtacagctgtgaggggtgtaag
ggtttctttaagcggacggtgaggaaggacctgacctacacgtgccgggacagcaaggac
tgcaccatcgacaagcgccagcggaaccgctgtcagtactgccgctaccagaagtgctta
gcctccggcatgaagagggaagctgttcaggaggagcggcagcgggggaaggaaaggctt
gacaacgaggtggagtccaccagcagcgtcaacgacgacatgccagtggagaagattcta
gacgcggaattggcggtggaaccaaagacagaggcctacgtggaagccagtctaggcaat
tcgtcgaacgatcccgtgaccaacatctgccaggcggctgacaagcagctgttcacgctg
gtggagtgggccaagaggatcccgcacttctccgacctcccactggacgaccaggtcatt
ctcctacgggcgggttggaacgaactgctgatcgcctcgttctcccatcggtctatctca
gtgaaggacggtatcctcctggccacaggtctccacgtccaccgcagtagcgcccacagt
gcaggcgtgggctccatatttgacagagttctgacagagttggtttccaagatgaaggac
atgcagatggacaagactgagctgggctgcctgagagccatcgttctcttcaatcccgat
gctaaaggattgacaaacccaggagaggtggaatctctgagggaaaaggtctacgcgtcg
ctagaagcctacacaaaacacaagtaccccgaacagcccggccggttcgctaagctgctc
ctgcgcctgccggcactgcgatcaattggactcaaatgcctggagcaccttttcttcttc
aagctgatcggcgacacgcccattgacaccttcctgatggagatgctcgaggctcctcat
caaatgacgtga
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