KEGG   Callorhinchus milii (elephant shark): 103184806
Entry
103184806         CDS       T03088                                 
Symbol
cop1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk04115  p53 signaling pathway
cmk04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103184806 (cop1)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    103184806 (cop1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cmk04121]
    103184806 (cop1)
Enzymes [BR:cmk01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     103184806 (cop1)
Ubiquitin system [BR:cmk04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    103184806 (cop1)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     103184806 (cop1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_EIPR1 WDR55 zf-C3HC4_2 Beta-prop_RIG_2nd EIF3I Beta-prop_TEP1_C Beta-prop_WDR19_1st zf-C3HC4 Beta-prop_CAF1B_HIR1 zf-RING_2 Beta-prop_EML Beta-prop_DCAF4 zf-RING_UBOX zf-C3HC4_3 Beta-prop_WDR90_POC16_2nd zf-RING_5 RING_XB3-XBAT31 zf-C3HC4_4 WD40_RFWD3 Beta-prop_Vps41 WD40_like Beta-prop_DCAF12 zf-RING_10 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_IFT122_1st zf-rbx1 WDR90_beta-prop_4th Beta-prop_SPT8 zf_C2H2_10 UvrD-helicase Sina_RING TRAF3_RING UPF0184 ERM_helical
Other DBs
NCBI-GeneID: 103184806
NCBI-ProteinID: XP_042191484
LinkDB
Position
Unknown
AA seq 694 aa
MATNRHSAAQQLLPGPGQAASSSSSAVASGPAATASSSASPAPSSSSAGSSSRGPGRAAG
AGAAGAGGGRRRPLLNGLVNSYEDKSNDFVCPICFDMIEEAHMTKCGHSFCYKCIRQSLE
VSNRCPKCNYVIDNIDQLYPNFLVNELILKQKQRSDEKRLKLEHPNGHRWQAIQDVLITD
QDSLDLANVNLMLDFIMQKKQQLEMESQAAQLQILMEFLQEAKRNKKEQLDQLQKELNVL
EEDIKRVEGLIFTERTGLHSPISELIPQQNLDSTVPQFEAPSPSHSSIIDSTEYNQPRGF
SGSSQGKRQTWYNNTLASRRKRLTAHFEDLEQCYFSTRLSRISDETRSANQLEEFRECLS
KFTRYSSVRPLATLSYANDLYNGSSIVSSIEFDRDCDFFAIAGVTKRIKVFEYGNVIQDA
VDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCW
SVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPTSMYHLAFGCAD
HCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVNKPHCLRSFK
GHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKEKKEDDTN
EFVSAVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq 2085 nt   +upstreamnt  +downstreamnt
atggcgaccaaccgacactcagcggctcagcagctgctcccggggcccggccaggccgcc
tcctcctcctccagcgccgtcgcctcggggcccgcagccacggcctccagctcggcctcc
cccgcgccctcctcctcctcggcggggagcagcagccgcgggcccggtagggcggccggc
gctggggcagcgggagcgggaggcggccgtaggcggcctctgctcaacggcctcgtcaac
tcgtacgaggacaagagcaacgacttcgtctgccctatctgttttgacatgattgaggag
gcccacatgacgaagtgtggccacagcttttgttataagtgtatccggcagagtctagag
gtcagcaacagatgcccaaagtgcaactatgtgatcgacaacatagaccagctttacccc
aactttctagttaatgagctcatcctcaagcagaagcagagatcagatgagaagcggctg
aagctggaacatccaaatggccacaggtggcaagcgattcaggatgtgctgatcacagac
caggacagtctggatctggctaacgttaacctcatgctggatttcatcatgcagaagaag
cagcagctggagatggaatcacaagcagcccagttgcaaattctaatggagtttcttcag
gaagcaaagaggaataaaaaagagcaactggaccaattgcagaaagagcttaatgttctt
gaagaggacatcaagcgagtagaggggctgatattcactgagaggactggcctgcactct
cccatcagtgagctgatcccccaacagaacttggacagcacagtgccacagtttgaagct
ccatccccatcacacagcagtattattgactccaccgagtataaccagccccgggggttc
agtgggagttcccagggaaagagacagacatggtataacaacacactggcgtcccggcgg
aaacgcttgactgcgcacttcgaggacctggaacagtgttatttctccaccagactctct
cgtatctctgatgagactagatcagcaaatcaactggaggagtttcgggaatgtctgtcg
aagtttacacggtacagctcagtcaggccgctcgccactctgtcctacgccaacgacctg
tataatggatccagcatcgtgtcaagtattgaatttgaccgagattgcgatttctttgct
atcgctggggtgacgaagcggattaaagtgtttgaatacggcaatgtgatccaggacgca
gtggacatccactatccagtcaacgagatgacctgtaactcgaaaatcagctgtatcagc
tggagtagttaccataagaacctcttagccagcagtgactatgaaggtacagtcatcctg
tgggacggattcaccggacagagatccaaagtgtatcaggagcatgagaagagatgttgg
agtgtagatttcaatctaatggaccccaaactcctagcttctgggtctgatgacgctaaa
gtgaagctgtggtccacaaacctggataactcagtggcgagtatcgaagccaaggccaac
gtttgctgtgttaaatttagtcccacttcaatgtaccacctcgcctttggctgtgcagac
cactgtgtccactactatgatcttcgaaacactaagcaaccaatcatggtgttcaaagga
catcggaaggctgtgtcttacgcaaagtttgtgagtggagaagagattgtatcagcctcc
acggacagccagctaaagctctggaatgtcaataaacctcactgcttaagatcatttaaa
ggacatatcaacgagaagaactttgtgggcttggcatccaatggggattatattgcctgt
ggcagtgaaaacaattctctttacctctactacaagggtctgtcgaaaacgctgctaacc
ttcaagtttgatacagtgaaaagcgtgttggacaaggagaaaaaggaggatgataccaac
gagtttgttagtgccgtgtgctggagggctttaccggacggggaatcaaatgtactaatt
gctgcaaacagccaaggcacaataaaggtgctggagctggtatga

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