KEGG   Callorhinchus milii (elephant shark): 103184922
Entry
103184922         CDS       T03088                                 
Symbol
tdp2b
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2
  KO
K19619  tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
cmk  Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmk03400]
    103184922 (tdp2b)
DNA repair and recombination proteins [BR:cmk03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     103184922 (tdp2b)
SSDB
Motif
Pfam: Exo_endo_phos UBA_4 Exo_endo_phos2 UBA_8 Rotavirus_VP1
Other DBs
NCBI-GeneID: 103184922
NCBI-ProteinID: XP_042202262
LinkDB
Position
Unknown
AA seq 408 aa
MSDLEPECKRPRITEPELDPGERLEPPPAAARGPAQEQPEAQPQPEARPEAQPQPRPEDE
EEAERRRRGLCTEFSAVSGTEEAAAQCYLAASGWELGRALNSYFDSDVQPSSSAMETPSQ
LDEGASSQVCIDLTDKDKVKTDNVKTDKDICEQEQVDESRISLLTWNIDGLDQKNIQERA
RAVCSLIALYTPDIVFLQEVIPPYYNYLKKRAVSYTIIPADEEGYYTAIMLKKSRVKLLK
QEITPFLSTSMERNLLIVQVNIAGNELCLMTSHLESTKDHSRERVRQLQTVMKKMQDAAE
TATVIFGGDTNLRDHEVTKLGGLKAGISDVWEYLGKPEYCQYTWDTQNNNNLEACYKCRL
RFDRVFFRAGTETQIIPQQMELVGLDKLECGRFPSDHWGILCDFDVIL
NT seq 1227 nt   +upstreamnt  +downstreamnt
atgagtgacctggagcctgagtgtaagaggccgagaatcacagagcccgagctcgacccc
ggggagaggctcgagccgcctcctgcagccgcccggggcccggcccaggagcagcccgag
gcccagccccagcccgaggcccggcccgaggcccagccccagccccggcccgaggatgag
gaggaagcggagaggcgccgccgcggcctctgcactgagttctccgcggtgtcgggcact
gaggaggccgcggctcagtgctacttggcggccagtggctgggaactggggagagcactt
aattcctattttgactcagacgtccagccatcttcctcagccatggaaactccttcgcag
ttggatgagggagcaagctctcaggtgtgtattgatctgacagacaaggacaaagtgaaa
acggacaatgtgaaaactgacaaggacatttgtgagcaggagcaagtggatgaaagtcgc
atttcattgctaacctggaacattgatggactagaccagaaaaacatacaagaaagagcc
cgagctgtttgttccctcatagcgctgtataccccagacatagtgtttctgcaagaagtt
attccaccttattacaattatttgaagaaacgagctgtgagctacacaattattccagcg
gatgaggagggctactatacggcaataatgctgaaaaagtcccgtgtgaagctgctgaaa
caagaaataacacctttcctaagcacctctatggaaagaaatctcctcattgtgcaggtg
aacattgcagggaatgagctctgtttaatgacttcgcacctggagagcactaaggaccat
tctagggagcgggtccgacaactgcaaactgtgatgaaaaagatgcaagatgcagcggaa
actgcaacggtgatctttggaggcgacacaaacctaagggaccatgaggtgacaaaactt
ggaggtttaaaagctgggatttcagatgtctgggaatacctaggaaaaccagaatactgt
cagtatacgtgggatacacaaaacaacaacaatctggaggcttgttacaagtgcaggctt
cggtttgaccgcgtgtttttcagggctgggaccgagactcagatcatcccacagcaaatg
gagctcgtaggattggacaagttggaatgtggaaggttccctagcgatcactggggcatc
ctgtgtgactttgatgtgatattgtga

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