Callorhinchus milii (elephant shark): 103184922
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Entry
103184922 CDS
T03088
Symbol
tdp2b
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmk03400
]
103184922 (tdp2b)
DNA repair and recombination proteins [BR:
cmk03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
103184922 (tdp2b)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
UBA_4
Exo_endo_phos2
UBA_8
Rotavirus_VP1
Motif
Other DBs
NCBI-GeneID:
103184922
NCBI-ProteinID:
XP_042202262
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MSDLEPECKRPRITEPELDPGERLEPPPAAARGPAQEQPEAQPQPEARPEAQPQPRPEDE
EEAERRRRGLCTEFSAVSGTEEAAAQCYLAASGWELGRALNSYFDSDVQPSSSAMETPSQ
LDEGASSQVCIDLTDKDKVKTDNVKTDKDICEQEQVDESRISLLTWNIDGLDQKNIQERA
RAVCSLIALYTPDIVFLQEVIPPYYNYLKKRAVSYTIIPADEEGYYTAIMLKKSRVKLLK
QEITPFLSTSMERNLLIVQVNIAGNELCLMTSHLESTKDHSRERVRQLQTVMKKMQDAAE
TATVIFGGDTNLRDHEVTKLGGLKAGISDVWEYLGKPEYCQYTWDTQNNNNLEACYKCRL
RFDRVFFRAGTETQIIPQQMELVGLDKLECGRFPSDHWGILCDFDVIL
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacctggagcctgagtgtaagaggccgagaatcacagagcccgagctcgacccc
ggggagaggctcgagccgcctcctgcagccgcccggggcccggcccaggagcagcccgag
gcccagccccagcccgaggcccggcccgaggcccagccccagccccggcccgaggatgag
gaggaagcggagaggcgccgccgcggcctctgcactgagttctccgcggtgtcgggcact
gaggaggccgcggctcagtgctacttggcggccagtggctgggaactggggagagcactt
aattcctattttgactcagacgtccagccatcttcctcagccatggaaactccttcgcag
ttggatgagggagcaagctctcaggtgtgtattgatctgacagacaaggacaaagtgaaa
acggacaatgtgaaaactgacaaggacatttgtgagcaggagcaagtggatgaaagtcgc
atttcattgctaacctggaacattgatggactagaccagaaaaacatacaagaaagagcc
cgagctgtttgttccctcatagcgctgtataccccagacatagtgtttctgcaagaagtt
attccaccttattacaattatttgaagaaacgagctgtgagctacacaattattccagcg
gatgaggagggctactatacggcaataatgctgaaaaagtcccgtgtgaagctgctgaaa
caagaaataacacctttcctaagcacctctatggaaagaaatctcctcattgtgcaggtg
aacattgcagggaatgagctctgtttaatgacttcgcacctggagagcactaaggaccat
tctagggagcgggtccgacaactgcaaactgtgatgaaaaagatgcaagatgcagcggaa
actgcaacggtgatctttggaggcgacacaaacctaagggaccatgaggtgacaaaactt
ggaggtttaaaagctgggatttcagatgtctgggaatacctaggaaaaccagaatactgt
cagtatacgtgggatacacaaaacaacaacaatctggaggcttgttacaagtgcaggctt
cggtttgaccgcgtgtttttcagggctgggaccgagactcagatcatcccacagcaaatg
gagctcgtaggattggacaagttggaatgtggaaggttccctagcgatcactggggcatc
ctgtgtgactttgatgtgatattgtga
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