Callorhinchus milii (elephant shark): 103184924
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Entry
103184924 CDS
T03088
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03013
Nucleocytoplasmic transport
cmk03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103184924 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103184924 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmk03019
]
103184924 (nup153)
Messenger RNA biogenesis [BR:
cmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103184924 (nup153)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
103184924
NCBI-ProteinID:
XP_042202782
LinkDB
All DBs
Position
Unknown
AA seq
1481 aa
AA seq
DB search
MASAGGGGGGSGGGDGGGKIRNRRHHIVSKPYAKKQGLVSKVTDTVKNIVPGWLQKYFGH
ANKPGETRNDEPAELIDDRDNQIPVNETPQYSDGRNSPIPTTSDLRGVPANKSALNFSEM
LLIRPALSRSHFNCAALDTSAHDSQPSTSSSFPIGSSGFSLVKEVKDSASLHEDDNISTT
SGFSSRASDKDVTTSRNPSLPPLWSPEADRFHLVSQQPTASLKKPSFNLSAFGGSSPSFG
STSLLNSSQLGDSPFYPGKTTYGGAAAATKNSRVRATPYQAPIRRQMKAKPASSPSYGVT
SATARRILQSLEKMSSPLADAKRIPTNMVSPVSKPFEKTAADVIDWQSKFRKLDAQPPPV
QKLQTPKFSSGATNRSMFFKPSLTPGGHTNRPVERTEARSNRLQEKTVPEVALRPLKSNN
SCLYNANSSPATNGLTSGGAGGKMRREKDHYSARGYRTQEVEVPELPEVSLPIKTAALPV
FNFGSPSTAASPITPILTKSLSDKAVMSSPSNVAFTFSTPNIKATDSKLQPVSLSDGFTF
REPIDKSTQLMFGVSAPSSVNPVNCTLSVAASPFVPAPVNKRKDETCDGPFKPAKTLKQG
SVLDILKGPGFTSSPSSKQFETASTDSVAASVKPLQLVTEKTVFSSESSTGTFGFGEKFK
PPEGAWQCDTCLLQNKGTHSKCIACQTAKATSKTAPPPKRTDLGFGNSKTIPPVGSGGKF
KPAAGMWDCDTCLVQNKADGVKCVACETPKPGTGVKPVLTLPATTESTKNTSANPSSTGT
GLSLADEFKKPEGAWSCDVCLLQNKTEDSKCVACQSPKPGVASGASTVPVSAPAETFAGF
GDKFKKPEGSWSCEACLVQNTSNVSKCIACQSAKPGSKTEFKGSAFSALSSVSSSPFKFG
IQSSATDPSQTNKITGGLKFGDKGGFKLGNQSGFKFGASDASSSSDVSGGIKFEAAGGIK
FGNVSKEQPLEESKKDNTQTSSSGFKFGFSVTTGNQASTVTKFGAAEANQQDKKDETNEV
VFGGFKFGSSGTSAKSEDKGVKGGYTFGSEDKKESQFVLGKQEEKKEATAVSEFGFGNPM
NKDSVAASPFLFRKAAEKKDSLTSAPFMFGKRKQVEEAGSQSDVSFKTPEKTKEVKLAPM
FDSSKQETKSGFTFNLAEKSEPAESVSQGFLFGPAVNASEQGAVKPTFNLFGNTSSSSTA
TNPGVSKPSSIFGSSASASTTPFLFRQTNTTAGSTSVGSGSESTVPAPKPFLFGSQEVKP
TPTTSSIGAPPAPFSFGSTPSNSNTTSSVFAFRAPATTSNSTGSSSSSAFGLGSNSLVTA
NPPAFGTSQAPAFGQSTNQPPAAFGSSTAPTFPFLTGCPPSAFSSQSTSSQPSLFGGQLS
NQPPSFGSTSSTTSSNSFQFGNSGTGASFTFNATNSSNEVFKFGSSSTGAPQQLVPTGNF
PFNQAPAFSPGAVGTNPFSASSGGRSTVAGRKIKTAVRRKK
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcaggaggaggaggaggaggcagtggcggcggcgacggcggcggcaagatc
cgaaacaggaggcaccacatcgtgagcaaaccgtacgccaagaaacagggactcgtcagc
aaagttacagacactgtgaagaatatagtacctggctggctgcagaagtactttggacat
gcaaataaacccggagaaacaaggaatgatgaaccagcggaattgatagatgatcgtgat
aaccaaattcctgtaaatgagaccccgcaatacagtgatggacggaatagcccaattcca
acaacaagtgatttaagaggagtgccagcaaacaaatctgctttaaatttctctgaaatg
ctgcttattcggcctgcgctcagtcgcagtcatttcaattgtgctgcattggacacttca
gcacatgattctcagccatccacatcctcctcgtttcctatcgggagttcggggttttcc
ctagtgaaggaagtcaaagattctgcctctttacatgaagatgataatatctccacgaca
agtggcttctcttctagagcctcagataaggatgtgaccacttcaagaaatccttctttg
ccacccctgtggtccccagaggcagatcgttttcatttagtttcccaacaacccaccgca
agcttgaaaaagccttcttttaatctctctgcctttggaggttcatctccatcttttggt
agcacatctttactaaattcaagccagcttggggattctcctttctaccctggcaagact
acatatggaggggcagcagcagcaacaaaaaattctcgagtgcgtgctacaccataccag
gctccaatcagaagacaaatgaaagcgaaaccagccagttcaccatcgtatggagtgaca
agtgccacagcgaggcgtatacttcagtcattagagaaaatgtcaagtcctttagcggat
gctaaaaggattccaactaacatggtatctccagtttcaaagccctttgagaaaactgct
gcagatgttatagattggcaatccaaattccgaaagctggatgcgcagcctcctccagtc
cagaaactccagacacctaagttttcttccggagcaacaaatagatcaatgtttttcaag
ccatcattgactcctggaggccacactaatagacctgttgaaaggacagaagcacggagc
aatagattgcaagagaaaactgttccagaagtagccctacgaccattaaaaagtaataac
agctgtttgtataatgcaaatagttcccctgcaacaaatgggctgacatctgggggagct
ggaggaaagatgaggagagagaaagaccattactccgccagaggttacaggacacaagag
gtggaggtcccagagctgccagaggtgtccttacccattaaaacagctgcactgcctgtt
ttcaactttggctccccttctacagcagcttccccaataacaccgattctgacaaaatct
ctttctgacaaggcagtgatgtccagtcctagcaatgttgcctttactttctcaacaccg
aatataaaagcaactgattcaaaattgcagcctgtttcactgtctgatggatttaccttc
cgtgaaccaattgacaaatcaacacagttgatgtttggtgtttctgcaccaagttcagtt
aatccagtaaattgcaccttgtctgttgctgcgtcgccttttgttcctgcacctgtaaat
aaaagaaaagatgagacgtgtgatggtccattcaaacctgccaaaactttgaagcaaggc
agcgtgctagacatcttgaaagggcctgggttcacttcgtctccttcatcaaagcaattt
gaaactgcgtccacagacagtgtagcagcctctgtgaaacctttgcaattggtcactgag
aaaactgtgttttctagtgagagctccacaggcacctttgggtttggagagaagttcaaa
ccacctgaaggtgcttggcagtgtgatacctgccttttacaaaacaaaggcacccatagc
aagtgcattgcttgccagactgctaaagctacttcgaaaactgctccacctcctaaacgt
accgatctgggatttggcaacagtaaaactatacctccagtgggctctgggggtaaattc
aaacctgcagcaggcatgtgggactgtgatacttgtttggtacaaaacaaagcagatggt
gtgaaatgtgtggcctgtgaaacaccaaaacctggaactggggttaaacctgtgctgacc
ttgcctgcaaccaccgaaagtacaaaaaacacatcagcaaatccctccagtactggtaca
ggattgagtttggcagatgagtttaagaagcctgaaggagcatggagctgtgatgtgtgc
ctcctacaaaacaagactgaagacagcaaatgtgtggcttgtcagtctcctaaaccaggt
gttgcatctggtgcatccactgttcctgtttctgcgccagcggaaacatttgctggattt
ggtgacaagttcaaaaagccagaagggagttggagctgtgaagcctgcttagtccagaac
acatcaaatgtatccaaatgcatagcttgtcaaagtgcgaaacctggcagcaaaactgaa
tttaaagggtctgccttttctgcactgtcatcagtttcttcttcgcccttcaaatttggc
atacagtcctcggcaacagacccttcacaaaccaacaagatcactggaggattgaagttt
ggagataagggcggttttaaattgggaaatcagagtggttttaaatttggtgcgtcagat
gctagttcatcttcagatgtctctggaggaattaagtttgaggctgcagggggtatcaaa
tttgggaatgtttcaaaagaacaacctctggaggaaagcaaaaaggataatactcaaacc
tctagcagtgggtttaagtttggcttttctgtcactactggcaaccaagcttcaacagtc
actaaatttggtgcagcagaagccaatcaacaagataagaaagatgaaaccaatgaagtt
gtgtttgggggctttaagtttggttccagtggaacatcagcaaaatcggaggacaaagga
gttaaaggtggctatacatttggctcagaggacaaaaaggaatctcagtttgtgcttggc
aagcaagaggagaaaaaagaagcaacggcagtgagtgagtttggctttggaaacccgatg
aataaggactctgtagcggcttcaccttttctatttagaaaagcagctgaaaagaaagac
tctctgacctctgcaccatttatgtttggtaaaagaaaacaggttgaagaagcaggatct
cagtctgatgtttcttttaaaaccccggagaaaaccaaagaagttaaattggcgcctatg
tttgattcttctaaacaagaaactaagtctggattcactttcaacttagctgagaaaagc
gaaccagcagaatctgtctcacaaggatttttatttgggccggcagtaaatgcatcagaa
caaggagctgtgaagccaaccttcaacctgttcggcaacacttcttcctcatccactgcg
acaaaccctggggtttccaaaccttccagtatatttggaagttctgcatccgcatcaacc
acaccgtttttgtttagacagaccaacaccactgctggtagtaccagtgttggaagtggc
tcagaatcaactgttcctgcacctaagccatttttatttggctcacaggaggtcaaaccc
acacccaccacatcgagtataggagccccacctgcacccttctcatttggctccacaccc
agcaacagcaacactacatcatctgtgtttgcatttcgagctccagctacaacatctaat
tcaacaggttcctcctcaagctctgcctttgggttgggatccaattctttggttacagca
aatccgccagcatttggtaccagtcaggcccctgcgtttggacaaagtactaaccagcca
cctgctgcctttggttcatctactgcgcctacatttccattcttaactggctgtccacca
tccgcctttagttcacagtcgaccagtagccaaccatcgctgtttggaggacagttatcc
aaccagccgccctcatttggttccacttcatctactacctcaagtaacagcttccagttt
gggaacagtggtactggtgccagttttaccttcaatgccaccaattcatcgaatgaggta
tttaaatttggatcaagttcaacaggagcaccacagcagctggttcccactggaaacttt
ccattcaaccaagcccctgcattttctcctggggctgttggcaccaatcctttctctgca
tcatctggcggacgttcaactgtcgctggacggaagataaagactgctgttagacgcaag
aaatag
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integrated database retrieval system
