Callorhinchus milii (elephant shark): 103185045
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Entry
103185045 CDS
T03088
Symbol
dcp1a
Name
(RefSeq) mRNA-decapping enzyme 1A isoform X2
KO
K12610
mRNA-decapping enzyme 1A [EC:3.-.-.-]
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103185045 (dcp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmk03019
]
103185045 (dcp1a)
03036 Chromosome and associated proteins [BR:
cmk03036
]
103185045 (dcp1a)
Messenger RNA biogenesis [BR:
cmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103185045 (dcp1a)
mRNA degradation factors
5'-3' decay
Decapping complex
103185045 (dcp1a)
Chromosome and associated proteins [BR:
cmk03036
]
Eukaryotic type
Gene silencing
piRNA pathway
103185045 (dcp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
mRNA_decap_C
DCP1
Motif
Other DBs
NCBI-GeneID:
103185045
NCBI-ProteinID:
XP_007901567
LinkDB
All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
MNRLSMKNLVEPINKDLEFQLQDPFLLYRNSNLSIYSIWFYDKNDCHRIAQLMSKVVHLE
AQQESPEGTSPNKTNGFDEENTIDILDMLSKAKEEYERGYYPDDSSILSSSPSLQNNVGL
VKSTSIEAFEHLSAQQQDQHVSTPRHLTVEELFGTSVPKEQAPFLHPSQEMLMMSQQEAT
GRRQNLLLPFTYEGSTTAKQPESPKHKADFPKLTLQDAKAQVLMSPAAIQQSDKCSAKHN
IRTSPLFKPALNSEALTNPATLAIGISDLGQSLQHDMKAVSPLMMCPLSSELSRTPQNLT
PGNNQILTAQGGPGARATGGFGFQGHELLQKLKLTQQHEQQHQTVGKPCLAANFTPLLVT
PESFKESNTKSADASMQVILTPVTNSSMLLSPSVFKPSAGRASEAESKCLSASPLTLASD
PRCSPLPTVLSKTQLQDTLTHLIKNDSEFLSTIHEAYLQILTKNIGNLKL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgactgagcatgaaaaatttagttgaacccatcaacaaagacttagagtttcag
ctccaagatccgtttcttctctaccgaaattcaaacctgtccatttacagcatctggttt
tatgacaagaatgactgtcacagaatcgcacaacttatgtcgaaggtagtgcatctggaa
gctcagcaggaatcacctgagggaacctctcccaacaagaccaatggctttgacgaagaa
aatactatcgacatcctggacatgctcagcaaagccaaggaagagtatgaacgaggatat
tacccggatgactcgagcattttatcgagttcccccagcttacagaacaatgtcggcctc
gtcaaatcgacctcaatcgaagcctttgaacatttgtcagcgcagcagcaggatcagcac
gtctcaacccctcgtcacttgaccgtggaggaattatttggaacctccgttccaaaagag
caggctccgttcttgcaccccagccaggagatgttaatgatgtcccaacaagaagccacg
gggagaaggcaaaacctgctgctgcctttcacttacgaggggtcaaccacggcaaagcaa
ccagagagtccgaaacacaaggctgattttcctaaactgaccctgcaggacgccaaggcg
caagtgctgatgtcaccagccgcaatccagcagtccgataaatgcagtgccaaacacaac
attcgcaccagccctctctttaaacccgctctaaactctgaggctctgacgaatccagcc
acactcgccatcggtatcagtgatttgggtcagagcctgcaacacgacatgaaagcagtc
tcgcccttgatgatgtgcccactctcctctgagctgagccgtacgcctcagaacctgact
ccgggaaacaatcagattctaacggcacaaggcggccccggagcgagagccactgggggt
tttggcttccagggtcacgagctgcttcagaaactcaagttgacacagcagcacgagcag
cagcaccagactgtcggcaagccctgcctcgcggccaatttcaccccattgctcgtcact
ccagagagcttcaaagaatccaacacaaaatccgcggatgcttcaatgcaggtcattctc
acaccggtcactaactcgtccatgctcctgtctcccagcgttttcaagccatcagcaggg
agggcatcagaagctgagagcaagtgcctttcagcctcccctttaacattagcatcagac
cctcgatgttcaccactgccaactgtcctcagtaagacccaactccaggatactctaacc
catctaataaagaacgactctgaatttctgagcacaatccatgaggcgtatctacagatc
ctcaccaagaatataggtaacctcaagctgtga
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