Callorhinchus milii (elephant shark): 103185424
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Entry
103185424 CDS
T03088
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 11
KO
K24260
WD repeat-containing protein 11
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmk04131
]
103185424
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cmk03037
]
103185424
Membrane trafficking [BR:
cmk04131
]
Endosome - Lysosome transport
Others
Others
103185424
Cilium and associated proteins [BR:
cmk03037
]
Other cilia and associated proteins
Other cilium assembly proteins
103185424
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR11_2nd
TPR_WDR11
WD40_CDC20-Fz
Beta-prop_WDR11_1st
WD40_Prp19
Beta-prop_EML_2
ANAPC4_WD40
EIF3I
WD40_WDHD1_1st
Beta-prop_WDR35_TULP_N
Beta-prop_EML
Beta-prop_IFT140_1st
RAB3GAP2_N
TPR_GEMI5
Beta-prop_TEP1_2nd
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
103185424
NCBI-ProteinID:
XP_042192817
LinkDB
All DBs
Position
Unknown
AA seq
1226 aa
AA seq
DB search
MSSFVVNIKLSARTLTGALSGQNRGAVDWGWQGLLAVGCHSLVLIIDPRTSQTIQVLERH
KANVVKVKWARENYHHNIGSPYSLRLATADTVGKIIVWDVAAGVARCEIQEYTKPIQDME
WLWNQDASRDLLLAVHPPNYIVLWNADTGTKLWKKSYAENILSFSFDPFELSNLALLTSE
GIVFVSDFSPSKAPSSSGKKVYISSPHSSPAHTKPAATGAKKALNKVKILITNEKPNADS
VTLNDCLQLSYLASKRNHMLLLYPREILILDLEVNQTVGIVAIERTGVPFLQVIPCRQRD
ALFCLHENGCITLRVRRSNCNLLALPSEEPDPDQPVQELTYDLRCQCDAIRITKTVRPFG
MVCCPVNENSAALIVSDGRVMMWELTSNQLWQSTTYSHSGSTASPLYRPVAFCGIPVDIH
QKKLPDLSLDSMIGQSMAAGEEQSKVCDQQEVQLKFLLTGFLSGLPLPPFVIRMCPPLTT
KNIKHYQSLLCVGTSNGSILVYHLTSGLLHKELSIHSCEVKGIEWVSLTSFLSFATSTPN
NLGLVRNELQLVDLPTGRSIAFRGERGNDEPPIEMIKVSHLKQYLVIVFKDKPLELWDIR
TYTLLREMXKNFPAVTALEWSPSHNLKSLRKKQLAAREAIARQTVPSDMETSSIESSMIS
LLQEAESKSEINQNISAREHFVFTDNDGQVYHLTVEGNIVKDGARIPPDGSMGSITCIAW
KGDTLVLGDSDGNLNFWDLKARLSRGIPTHRGWVKKIRFAPGKGNQKLLVMFNDGAEVWD
TKEIQMVSSLRTGRNVNYKILDVDWCSSDKVVLAADDGCIRVLEMAMKSASYRIDEQELA
DPLWCPYLLLPRCCLALKAFLLHQPWNEQYSLDIMQIDYLENEEVKYLIQEQLNSLTNDM
KSLFLDPEFHLLQRCLLVARLFGDESELHFWTVAAHYLHSFSHGKQQLEPSTIPVHESQE
NPLDICCDILCENSYFQRSQIERVNLQEAKRTTYDHTRKCADQLLLLGQTDRAVQLLLET
SAENPSYYCDSLKACLVTTITSSGPSQSTIKLVATNMIANGKLAEGVQLLCLIDKAADAC
RYLQTYGEWNRAAWLAKVRLNSEECAEVIKRWVDYLCSPQVNQKSKAILVFLSLGCFRKV
AEMLHSMRYFDRAALFLEACLKYGVFEIDESTRKFCNSVYADYGRYLKMLNLREGAILFS
TKGNDAGSELLKELQQGKEDKSASVS
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgttcgtcgtcaacatcaaactgtccgccaggaccctgaccggagctctgagc
ggccagaaccggggggccgtggactggggttggcagggactattagctgttggctgtcat
tcccttgtattgatcattgatcctcgcacttcgcagactatccaagtgctggaacggcat
aaagcaaatgttgtcaaggtgaaatgggccagagagaactaccaccacaacattggctct
ccctattccctgcgcctggcaactgcagacaccgtaggaaagatcattgtatgggatgtg
gctgcaggagtagctcgatgtgagattcaggagtacacaaaacccattcaggatatggaa
tggctgtggaatcaggatgcctcacgggaccttctgttagctgttcatccaccgaactac
attgtcctttggaatgcagatactggtacaaaactgtggaagaaaagctatgcagaaaat
attctctcattttcatttgatccctttgaactatcaaatctagcgttgttgaccagtgag
gggatagtgttcgtctcagatttttcaccttccaaagctcctagcagctcaggaaagaag
gtttacatatccagtcctcactcgagcccggcccacacaaaaccagcagcaactggtgcc
aagaaagccttaaataaagtcaaaatactcatcactaatgaaaagcccaatgcagattct
gtgacactgaacgactgcctgcagttgtcatatctggcttccaagaggaaccatatgctg
cttctataccccagagaaatcttgatcctcgatttggaggtaaaccaaaccgtaggaata
gtggcaattgaacgaacaggagttcctttcctacaggtaattccttgccgtcagcgagat
gctttgttttgtcttcacgaaaacggctgcataacattgagagtccgccgatcgaattgc
aatttgttggctctccctagtgaggaaccagatccggatcagccagttcaggagctaacc
tatgaccttcgctgtcagtgtgatgcaatcagaatcactaaaacagtgcgtccttttggt
atggtgtgctgcccggtcaatgagaattccgcagctctgattgtaagcgatggcagagtg
atgatgtgggagctaacatctaaccagctctggcaaagtactacctacagtcactcaggt
tccactgcctcccctttgtaccgtcctgtcgcattttgcggtattcctgtggacatccat
caaaaaaagctgccagatctctccttggattccatgataggacaaagcatggcggctggt
gaagagcaatctaaggtttgcgaccaacaagaagtgcaattgaagttcttgcttaccggc
tttttgtcaggactcccactgcctccctttgtcatacgaatgtgcccacctctcaccacc
aaaaacataaaacactatcagtctctgttgtgtgtgggcaccagcaatggatctatattg
gtttaccatctcaccagcggattgttgcacaaggagctaagcattcattcctgcgaagtg
aaaggcattgagtgggtgagcctgaccagtttcctctcttttgccacttcaaccccaaac
aatctggggttagtgcggaacgagctacagctggttgatctgccaacaggaagaagtatt
gcgtttagaggcgaacgaggcaatgatgaaccgccaatagaaatgattaaagtgtcccat
ctgaagcagtatttggttatcgtgttcaaagataaacctttggagctgtgggatattaga
acgtacaccttgcttcgagaaatgntcaaaaactttcccgcagtgacagcattggagtgg
tctccatctcacaacctaaagagtctacgtaaaaagcagctggcagcccgagaagccata
gccagacagactgttccatctgatatggaaaccagtagtattgagtcttcaatgatcagt
ttgctgcaggaagcagaaagtaaatctgaaattaaccagaatatttctgcacgggagcac
tttgtgttcactgataatgatgggcaggtctatcacctcactgtagaaggaaacatagtc
aaagatggggccagaattcctccagatggaagtatgggcagtattacttgtattgcttgg
aagggagacaccctggtcctgggagacagtgatggcaatctgaacttctgggatctaaaa
gccagactttccagaggaattcctactcatcgtggttgggtgaagaagatccgttttgcc
cctggaaagggaaatcagaagctgttggtgatgtttaatgatggagctgaagtctgggat
acgaaggagattcagatggtgagtagcctcaggactggtcggaatgtcaactacaagatt
cttgatgtggattggtgcagctctgacaaagtggtcctggcagccgatgatggatgcatc
cgggttttagagatggccatgaaatcagcaagctacagaatagatgagcaagagttagca
gatccactgtggtgtccttaccttctgcttcccagatgctgccttgcattgaaagctttc
ttattacatcaaccgtggaatgaacagtattcactggatattatgcaaattgactattta
gaaaatgaagaagtaaaatatctcatccaagagcaactgaactcattgacaaatgacatg
aagagtcttttcctggatccagaattccacctgttgcagagatgcttgctagtcgcaagg
ctgtttggtgatgagtcagaactgcacttttggactgttgctgctcattatttacatagc
ttctcgcatggaaaacagcaacttgaacccagtacgattcctgttcacgagagccaagaa
aacccactggatatttgctgtgacatactctgcgaaaattcctacttccagagatcccag
atcgaacgggttaatctacaagaagcaaagagaacaacttatgatcacacaaggaaatgt
gcagaccaattactcttgctaggccagacagacagagcagtacagctactgctggagacc
agcgcagagaatccaagctattactgtgactccctgaaggcttgtctggttacaaccatt
acttcttcgggtccttcccagagcactataaaactagtcgctaccaacatgatagctaat
gggaagctagcagaaggcgtccagctgctttgcctaattgataaagccgctgatgcttgt
cggtacttgcaaacctatggggagtggaatcgagctgcgtggcttgcaaaggtgcgtctc
aactcagaggaatgtgcagaagtaataaagcggtgggtagactatctctgttcaccacag
gtgaaccagaaatccaaggccattctggtctttctttcgttaggctgttttaggaaagtt
gcagaaatgctgcacagcatgcggtattttgacagagctgcacttttcctggaggcctgt
ctcaaatacggggtctttgaaatcgatgaaagcacaaggaaattttgcaattcagtgtat
gcagattatggaaggtacttgaagatgctgaacctaagggaaggagcgattctcttttcc
acaaagggaaacgatgccggctctgagttgcttaaggaactacagcagggtaaagaagat
aaatccgcttctgtttcatga
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