Callorhinchus milii (elephant shark): 103185523
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Entry
103185523 CDS
T03088
Symbol
lamp1a
Name
(RefSeq) lysosome-associated membrane glycoprotein 1a
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03272
Virion - Hepatitis viruses
cmk03273
Virion - Lassa virus and SFTS virus
cmk04140
Autophagy - animal
cmk04142
Lysosome
cmk04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
103185523 (lamp1a)
03272 Virion - Hepatitis viruses
103185523 (lamp1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
103185523 (lamp1a)
04142 Lysosome
103185523 (lamp1a)
04140 Autophagy - animal
103185523 (lamp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmk04131
]
103185523 (lamp1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmk04147
]
103185523 (lamp1a)
04090 CD molecules [BR:
cmk04090
]
103185523 (lamp1a)
Membrane trafficking [BR:
cmk04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
103185523 (lamp1a)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
103185523 (lamp1a)
Other autophagy associated proteins
RNautophagy/DNautophagy
103185523 (lamp1a)
Exosome [BR:
cmk04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
103185523 (lamp1a)
CD molecules [BR:
cmk04090
]
Proteins
103185523 (lamp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
Motif
Other DBs
NCBI-GeneID:
103185523
NCBI-ProteinID:
XP_007902260
UniProt:
V9KCK3
V9KCF5
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MSHVRRRVSVQCARRPRTVSRTMKEAMATALSRGLFLVLASGFLQTASANTFEVKTGNET
CILAKFEATFVISYETIDKRMATSFFNLSKNATVNPSSSCNNMTVPQLVISFGDGHSIGM
NFSKDSMTYRVEVLSISYNASDRSLFPNATSGGLITVVSNVTNVGGKMNTTYTCFSGYTV
HLKNVTVTMSNIQMEAFLPDNTFSKNETLCDGDVTTTLPTTVTTTIPTPTTSPSSNPGNP
APRTYNISGVNETCLLAQMGLQLNITYVTKNNKTAQKVFNIQPNVTNSNGNCSHDWAFLQ
LTDDSTVLTFRFVVNTTSNKFYLKEVGVITNLTLPSAQRNFNATNASLTYLQTSVGKSYM
CRAKQTLQVTPEFSINAFQFHIQLFKINDGKFGPAEECKLDQDNMLIPIIVGAALAGLVL
IVLIAYLIGRKRSHAGYQTI
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacgtgaggcggagggtttccgtgcagtgcgcgaggcggccgcgaaccgtcagt
cggaccatgaaagaagccatggcgaccgcgctctctcgcggcctgttcctggtgctcgcc
tcgggtttcctacaaactgcatcagcaaacacgtttgaggtgaagactgggaatgaaacc
tgtatattggctaaatttgaggctacatttgtaatcagttatgaaacaattgataaaaga
atggctacaagtttcttcaacctttcaaagaatgcaacagtaaatccaagcagcagttgt
aataacatgactgtacctcaactggtaatcagctttggggatggtcattccatcggcatg
aatttttcaaaggactccatgacctacagagtagaagtactaagtatttcttacaatgcc
agtgatcgttcactttttcctaatgcaacttctggtggcttgataactgtagtttcaaat
gttacaaacgttggtgggaaaatgaacacaacatacacatgtttcagtggctatactgtg
catttgaagaatgtgactgtaactatgagcaatatccaaatggaagcttttctaccggac
aatactttcagcaaaaatgaaactctatgtgatggtgacgtgacaacaactctacccact
actgtaacgactaccattccaacaccaacaacctccccatcatcaaacccagggaatcca
gctccaagaacatataatattagcggtgtgaatgaaacttgccttcttgctcagatggga
ctacaacttaatattacttatgttacaaagaataataagacggcacagaaggttttcaat
atccaacccaatgtaaccaactcgaatggaaactgtagccatgattgggcatttcttcaa
ctgacagatgattcaactgtccttacatttcgctttgttgtgaatactactagcaacaag
ttttatctgaaggaagttggtgtcatcacaaacttgactttgccttctgctcaaaggaat
tttaatgccacaaatgccagcctgacttacctacagactagtgttggaaaatcttatatg
tgccgtgctaaacagaccctgcaagtgactccagagttctccatcaatgcatttcaattc
cacattcagctgttcaaaataaacgatggaaaatttggacctgctgaagaatgcaagctg
gatcaagacaacatgttgatccccattatagttggcgcagctcttgctggacttgtgctg
attgtattgatcgcgtatctgattggaaggaagagaagccatgctggatatcaaactatc
taa
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