Callorhinchus milii (elephant shark): 103185629
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Entry
103185629 CDS
T03088
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03013
Nucleocytoplasmic transport
cmk03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103185629 (srrm1)
03015 mRNA surveillance pathway
103185629 (srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmk03019
]
103185629 (srrm1)
03041 Spliceosome [BR:
cmk03041
]
103185629 (srrm1)
Messenger RNA biogenesis [BR:
cmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103185629 (srrm1)
Spliceosome [BR:
cmk03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
103185629 (srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
103185629
NCBI-ProteinID:
XP_042194375
LinkDB
All DBs
Position
Unknown
AA seq
890 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMNKVNLEVIKPWITQRVTEML
GFEDDVVIEFIFNHLEEKNPDAKLMQINLTGFLNGKNARMFMGELWPLLLSAQDNIAGIP
SAFLEQKKEEIKQRQIEQEKLATMKKQDEEKEKKDKEDKENREKRDRSRSPKRRKSRSPS
PRRRSPARRERERKRSPSRSPRRRTRSRSKSASPVSTVRKPEQVSPEPDLSLKERKASPP
PEATSTSDILKEVKPEAPEVKETLSEQPSKKEKDKKERNRHRSRSRSKSRSRSRSRSHSR
PRKRPRSRSRSYSPRRRPSPRRRSPPRRRSPPRRLPPPPPLSRHRRSRSPIRRRRSPSAS
SSGSSSSSSSRSRSPPKKSKRISVSPPRKPRRSSPSPASPHRRRHRSPIPPTSPVHKGPP
RSSSPHLNRSRKGQTSVSPARPAPKRKGSLKRESVSPPPKPRRSEPSDSEDDKGGKAAGV
ESVQQRRQYRKQNQQTSSESGSSSSSEAEAPKRSSAKNGEVRRRRQRSLSRSMSPSPAMR
KRHKDFSPRMPLGKRWHFPVAKRRRRTPSPPPRRRRSPSPPRRRRSPSPPRRRSPSLPPR
RRSVSPRRYSPPIQRRYTPSPPPRRRESPTPAATKRRSSPSPSLRRRRGSPPPARPARDG
RSPPPHKRHSPSPRPRLVRGSVSPPATRRASVSPPPPQRRPMSPSPSNRPIRRVSRTPEP
KKSKKISPAPQAARRTTSSRSESGSPERLSKKRPLTSVSRSQSGSRSPTAAAATAPPAKK
AKSASLSPSPAKVSDQEAGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAATPPVVAEETSV
QSPAKSPQPTPAVEPNKDSGSEEENLDDLEKHLREKALRSMRKAQASPPL
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggttttttccgcggaaccagtgcagagcaagacaaccgtttcagcaacaag
cagaagaaactcctcaagcaattaaaatttgcagaatgtcttgagaaaaaggtggatatg
aacaaagtgaacctggaagtgatcaagccatggattacacagagagtgacagaaatgctg
ggatttgaggatgatgtagttattgagtttatcttcaaccaccttgaagagaagaaccca
gacgcaaagctgatgcagattaacctgacaggatttctgaatgggaagaatgcaagaatg
ttcatgggagagctctggccgctgctgttgagtgcacaagacaacatcgcaggaatcccc
tctgcctttctggaacagaagaaggaagaaatcaagcagagacagattgaacaagaaaag
ctggctaccatgaagaaacaggatgaagagaaggaaaagaaggataaggaagacaaagaa
aaccgagaaaagagggaccgctccagaagtccaaagaggcgtaaatccagatccccgtcc
cctcggaggcggtcgcctgccaggcgggagcgcgagcgcaagcgatcgccctccaggtct
cctcgccgcaggacaaggagcaggagcaaaagtgcttctccggtgtcgacagttagaaag
ccggagcaggtgtcgcccgagcccgatctctcgctcaaagaacggaaagcatcgccacct
ccggaggcaacttccaccagcgatatcctgaaggaagtgaaacccgaggcaccagaggtg
aaggaaaccttatcagaacagccttcgaaaaaggagaaggacaagaaagagaggaaccgg
catcgatcgcgttcgcggtcaaaatccaggtccaggtcccgctcacgctctcattcacgg
ccaaggaagcgtcccaggtcccgctcaaggtcctattcaccccgaagacggccaagtcct
aggcgtaggtccccacctcggcggagaagcccacccagacgcctaccacctcctcccccg
ctctccaggcacaggcggagtagatcaccaatcaggaggcgccgatctccctctgcctcg
tcctctggcagcagttcctcctcctcctctcgctcgaggtcacccccgaagaagtccaaa
cgcatctcggtcagtcctcctcgcaaacctcgccgctcctccccatcccccgccagccct
catcggagaaggcaccggtcacctattcccccaacaagtcccgttcacaagggacccccg
cgatcttcgtctccacacttgaaccgctcgaggaaaggccaaacgtctgtgtctcccgct
agaccagcaccaaaacggaaagggagtctgaagcgagagtctgtttctccacctcctaag
ccaagaaggtccgagccatctgattcagaggatgataaagggggcaaagctgccggagtg
gagtcagttcaacaacgccgccaatatcgcaaacagaatcagcagacttcatcagagtct
ggatcttcatcctcgtctgaagctgaagcaccgaaaagatcgagtgcaaagaatggggag
gttcgaagaaggcgtcagcgctctctgtcacggagcatgtctccgtcacccgccatgcgg
aaacggcataaggacttctctcccaggatgccgcttggaaagaggtggcacttcccagtg
gcgaaaaggcgcaggagaactccatcaccacctcccagaagacgtcgttcaccctctcct
ccaagaagacgtaggtccccatctccaccgaggcgtagatctccctctctgccaccacgc
agacggtcagtctcgcccagacgctattcccctccgattcagagaagatacactccgtct
cccccgcccaggaggagggagtcccccacaccagcagcaaccaagagacgcagctctccc
tctccctccctcaggcgcaggagagggtcgcctcccccagcccgcccggcccgagacggt
cgttccccaccaccccacaaacgccactcgccctcccctcggcccaggctggtccggggg
tcagtgagccccccggcaactcgacgagcgtcagtgtctccgccaccaccacagagacgt
cctatgtctccctcccccagcaacaggccaatccgccgggtgtcacggaccccagaaccc
aagaaatccaaaaagatctcgccagccccacaagctgcgaggaggacaacctcgtccagg
tcggagtctggatcaccagaacggctctccaagaaaaggccgctcacctccgtgtccagg
tcacagtctggcagcaggtcaccaacagcggctgctgcaacagcgccacccgccaaaaag
gcaaagagtgcttctctcagtccatctcctgccaaggtgtccgaccaggaggccgggggc
aagaagaagaagaagaagaaggataagaagcacaagaaggacaaaaaacacaagaaacac
aagaaacacaagaaagaaaaagcagcgacaccaccagttgttgcagaggaaacctcagtt
cagtctccagcaaagtcaccccagccaaccccagctgtagaacccaacaaggattcagga
agtgaagaagaaaacctggatgatctagaaaagcacctcagagagaaggctttgcgatca
atgcggaaggctcaagcttcaccaccgttatga
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