Callorhinchus milii (elephant shark): 103185652
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Entry
103185652 CDS
T03088
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04136
Autophagy - other
cmk04140
Autophagy - animal
cmk04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103185652
04136 Autophagy - other
103185652
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
103185652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmk04131
]
103185652
03029 Mitochondrial biogenesis [BR:
cmk03029
]
103185652
Membrane trafficking [BR:
cmk04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
103185652
Others
Specific organelles associated proteins
Auto phagosome
103185652
Mitochondrial biogenesis [BR:
cmk03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
103185652
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ATG16
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_NWD2_C
eIF2A
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_HPS5
RMC1_N
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_SPT8
Fez1
KASH_CCD
CCDC93_CC
APEH_N
Lectin_N
HEF_HK
FAM76
Motif
Other DBs
NCBI-GeneID:
103185652
NCBI-ProteinID:
XP_007902496
UniProt:
A0A4W3I746
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MAAAARVGERRWKKNIAEQLRLRDRVQRQGFEDLIQAYNKLLEKSDLQTVLAERFQGDKY
DLHNRHDISPGSDNMRNESLAQEVSQMRIRHQEELTELHKKRGELAQNVIDLNSQLQQKD
REIHANEAKMLEYEKQIQQLQVECQDLRNNLQDLGQANQTLKDEYDALQITFNALEEKLR
KTSDENRELITRWMAEKAQEANRLNAENDKDTWRRQAKLKKELAEAAKEPLNIDPDDDIE
VLGEEGPDTGSETSPVRGTNRTSRRTSQASGLLDSITNIFGKRSPTFHGITTEATECRTG
PCSEMRLPNTALHVFDAHDGEVNSVKFSPASRVVVTGGTDRKVKLWEVSLGKCELKGSLT
GSNAGITSLEFDSTGAYLLAASNDFASRIWTVDDSRLRHTLTGHSGKVLSAKFLLDNARI
VSGSHDRTLKLWDLSRKICIKTVFAGSSCNDIVCTDQCVMSGHFDKKIRFWDIRTESIVR
EMELQGRVTSLDLSPERSELLTCSRDDLLKIIDLRTNVIRQTFSTQGFKCGSDWTRVTFS
PDGKFVAAGSSDGVLYIWNVESGKVERSLGKHHSSSINAVAWSPSGEFVISADKGNRAVL
WSEL
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcccgggtcggggagcggcgctggaagaaaaacatcgccgagcagctg
cggctccgggaccgggtccagcggcagggctttgaggacctgatccaggcgtacaataag
cttctggagaaatccgacttgcagactgtcctggctgagagatttcaaggagacaaatat
gaccttcacaataggcatgatattagtccaggctctgataacatgcggaatgaatcgctg
gctcaggaagtttcccagatgaggattcgccaccaggaagagctcaccgaactgcacaaa
aagcgcggtgagcttgcgcaaaatgtaattgacctcaacagccaactgcaacaaaaggac
cgagagatccacgcaaatgaagcaaagatgctggaatacgagaagcagatccagcagctg
caggtggagtgtcaggacctgcggaacaacctgcaggacctgggacaagctaatcaaacg
ctgaaggacgaatatgacgctctgcagatcacattcaacgccctggaggagaagctgcgg
aaaacgtctgatgagaacagggagctgatcacccggtggatggctgagaaagcgcaggaa
gcaaatcggctgaatgctgaaaatgataaagatacctggagacgtcaggccaaactgaaa
aaggaacttgcagaggctgccaaggaaccattgaatattgaccctgatgatgacattgag
gtgctgggtgaggaaggccctgacacaggcagcgaaacgtcacccgtgcgaggaacaaat
aggactagtaggcggacatcacaggcatctggactcttggattctattactaatattttt
ggaaagcgttcacccacttttcatgggatcacgactgaggccacagagtgtcgtacggga
ccttgcagcgagatgcgactgcccaacacagctctccacgtgtttgacgctcatgatggg
gaggtgaactcagtcaaattcagcccagcctcgcgggtggtggtcactggcggaacagat
cggaaagttaaactatgggaagtctctttaggaaagtgtgagttgaaaggatctctaact
gggagcaatgctggaattacaagtcttgaatttgacagtacgggtgcttacctgttagca
gcctccaatgactttgccagcagaatctggacagtggacgactccaggttacgacatacc
ttgacagggcacagtggcaaagttctgtctgcaaaattccttctggacaacgcccggatt
gtatcaggcagccacgataggaccctcaaactctgggacttgagtcgtaagatctgtata
aagactgtgtttgctggctcgagctgcaatgacattgtttgtacagatcaatgtgttatg
agtgggcactttgataagaagattcgcttttgggacatcagaacagaaagcattgtgcgt
gagatggaactgcagggccgtgtgacgtccctagaccttagccccgaacggtcagagctc
ctcacttgctccagggacgacctgttgaagatcattgacctgcggacgaacgttatacgg
cagacctttagtacgcaaggattcaagtgtgggtctgattggacaagagtaacattcagt
cctgatgggaaatttgtggcggctggatcctcggatggagtgctttacatatggaatgtg
gaatctggaaaagtggaacgaagcttaggaaaacaccacagctcatcgataaatgcagtg
gcgtggtcaccatctggggagtttgtgatcagcgcagacaaaggaaaccgagcagtactc
tggtcagaactgtga
DBGET
integrated database retrieval system
