Callorhinchus milii (elephant shark): 103185805
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Entry
103185805 CDS
T03088
Symbol
rp1l1a
Name
(RefSeq) retinitis pigmentosa 1-like 1 protein
KO
K19538
retinitis pigmentosa 1
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cmk03037
]
103185805 (rp1l1a)
04812 Cytoskeleton proteins [BR:
cmk04812
]
103185805 (rp1l1a)
Cilium and associated proteins [BR:
cmk03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
103185805 (rp1l1a)
Cytoskeleton proteins [BR:
cmk04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
103185805 (rp1l1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCX
DCX2_DCDC1
Motif
Other DBs
NCBI-GeneID:
103185805
NCBI-ProteinID:
XP_042188735
LinkDB
All DBs
Position
Unknown
AA seq
2292 aa
AA seq
DB search
MSVAPALLLRRKIFLTDQDDPLFFGLYLCHIPLNYEQPLPPVAKSAPLTEVTPAKKITFY
RSGHPQQSGVKMAVNKRVFKTFDALLDDLSQRVSLPFCVRTVTTPRGVHSISTLEQLEDG
GSYLCSDKKSIKQANANAAVRKPASQQGPRPTSARRRAILMARQDEDHSHHIHKGPKKIT
MIKNGDADIHHSIILNKRNAQNFRNFLDEISELMQYNVRKLYTVEGRKIDNLQALFHCPS
VLVCVGHEPFKPVTYENLRRNPSEKLPGLSMRSRASIASESFDSKKNANFGLEAKKSVIH
PRSPSRSPRISLSSHKSYPNGLNMSSGNSGYASFMDSCPHEKNGEFATALIDDDIEKKVH
VNKDGSLSVEMKVRFRLLNDETLQWSTQIRRSSLPRKSSCDRLCFLEDQVMEKAEQMNPN
NGSEVDEPFCSCDADDSYISKLNDAEHAENLCQNCCNQCQEYDIWKNPIYVEKSKGEETH
NVTRARSSCSTTSSCRRITQKKESIESLRTTSSEEYTQHIVQEAVCYSKTAENGDDNRVK
YCSLRRCSCQNSSTVSASDMGKNHESRESTSSSHRASSRPSTGRSHQNNAVSQELTDKQT
FVNVSPSPSTANSKKNSAIKSTDVRAPSPTSSMPSQNTESTAEEYRPVSQTSKSSAGSKQ
TKDEKSSEERAHSVTSSCSSHSAKCSDQSVGNNHLSPRPISAASSCPSQTSRKASAMDNM
QDAEEVRSIMSSYSHNHDKNLQEATPECDRPKSKMSLSSGRSNTDKQEKQDVSESENQSR
PGSSFSGLQGSHPELHVQDSDNNARPISSVSHLSKHFKQSKQGKVKMDSDVDSSSSVILF
SSVSSAPQNTAPSLAPEEEARPYSNASCSEISNGKNKVKLTVQQPSGSTFSEPLSLNGNK
ELNVANSDNESIRPSSSESGSCCNSKRNKSRMTKSEAESRPSTPASSNSKADPNLCAEKQ
ANDQDQRPMCSPSRLLEFVQVENNVKMESKGSDKASSICYSVSKASKAKIKSKQVKDESE
ETNAAKVELSSATVVEDAAVSVIDSASDQSTRQPSPPKGKPGAKNGRQLLKSSSQKSRSS
IGTCSIVPGEITGEKPPESKLNVLRSKSNLSEKSNDLNSHKADENINNKSVREKTSERGS
KKSKCKHGHQIKKDHDENHTSTDACEKNDFIPSELPNASLEEVVHTWLQKIPSENLLVTY
EEFKEGHEKPATNVTPEGTKAEVEEATTTLDESKQETIAGESEPTEKNDLEAAKLEDSGS
LNADNNDTMEGSVKDVVETSQAEPVNSGLSVTAKPNNPQNRDLPNNAHSSIQIMKVLLFT
RQGAKLDRSNSLPELSPELEKKLSKSAKSLLTCLGNLHLFDEESLHSKDKSPNSNNSRYE
ELLGILRSLWLTGIAEGDENEALHMAGNHSKPFKVHNSVDKDITPMSSSGVDVSSGSGGS
GEDSIGGTVNTSLSTEKIKCDLAIKTCTIMNENSTKIKQPHSVKTSSDEKDEQYSTSTRM
SNVCCRKQKLRSCESSQYQSQESNIGNRSETRQLDAVSSSPVTPDIAYRVQWSSGGKSIN
NYDPDENTYSDTAEKPQDTIQNIKDQTDPSTDVVQTSDRESCSIQETIHQSETTNHNRPE
DVEDLEEQKSVDNKITEECNNVDVTESPEQISKDKECTVQNRAEEKGCVPPQKISPDPEP
AWVMKLLQKIEKQFIAHYVDAMNDFKIKWNLENNDTLDQMIADLREEVSRRIQASIKKEL
RKVQGRSGKKVPRPPQDQIRRESSEQTDQRRRRLRAMYKQSNCDDNKMNNAPADANKKNN
YEQNDTDLNEQLSSDEFCPCESCAEKSKASKPEINPVQSFAPVVKYFDLREILKLNKASK
NVEKNGSDTSELLDRVSNKQEIAERESIGSVQNKDNTELKSEDGDNMEVKTEDEENMEDK
MEEKENVEDKTEDEENVEVKTEGEDANDKTEDGKNVEETEDEENAEVKTEDAGQDDESVT
ENQENINNETESHGSDETSHQDEAEETKGDLDKNSNLQDIDEEQNLVEKCEDELESPSGE
SEGSVNIKSDDAKEPTEDRKSNICKNELQQQEDGDNSEGISKCSECKADNMKHTTEECTT
TPEANGEQENQNEDNNPLLEDDSDTIDRDNSQDNVKETTDSNVSAENLDEVSELSDEHLE
SDFVKNQNEEEVEEVGVDGKITTEHTTSPDISCQVQAAEVQQVSAMEAPDGDCVQMKSGE
GASSTSDKTVPRATQMYPESSSDDDRETICNSPEEPAHQKDGEDTESDKQVSPVNKSKQP
VNEEFDAEDLDF
NT seq
6879 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggctcctgctttgctgcttcggaggaagatttttctaacagatcaggatgac
ccactcttctttgggttatacctctgccacataccattaaattatgagcagcccctgcct
ccagtcgccaagtccgcccccctgactgaagttactccagctaagaaaataaccttctac
agaagcgggcaccctcagcaaagtggagtaaagatggctgtaaacaaacgggtcttcaag
acctttgacgccctgctagatgacctctctcagagggtatctcttccattttgtgtccgc
actgtcacaacccctcgcggggttcacagcatcagtacgctcgagcagttggaagatgga
ggttcttatctgtgttctgataaaaagagcatcaagcaagccaacgcgaatgccgctgtg
agaaagccagcttcacagcagggccctcgaccaacaagtgcccggcgacgtgccatcctg
atggcaaggcaagacgaagaccattcacatcacatccataaaggacccaagaaaatcaca
atgataaaaaacggagatgctgacattcatcactccatcatcctgaataagaggaatgca
cagaacttcagaaatttccttgatgaaatttcagagctcatgcaatataatgtgagaaaa
ctttacacagtggaaggaagaaaaatcgacaacctgcaggcccttttccattgtcctagt
gtgctggtgtgtgttggacatgaaccgtttaaaccagttacatacgaaaacctcagaagg
aatccatctgaaaagctgccaggtctgtctatgcgatcccgtgccagtattgccagtgaa
tcatttgacagcaagaaaaatgctaattttggattggaagcaaagaagagtgtaattcat
cccagatcaccatctaggtcacctagaatttcattgtcatcgcataaatcctatcctaac
ggcttgaacatgtcatcaggaaacagcggctatgcttcatttatggactcatgcccacat
gagaaaaatggggaatttgctactgccctgatagatgatgatattgagaaaaaagttcat
gttaacaaggatgggagtctctctgtggaaatgaaggttcgctttcgtttgcttaatgac
gagacacttcagtggtccacacagatcaggagatctagtttaccaagaaaaagcagttgt
gaccgcttatgcttcttggaagatcaggtcatggaaaaggccgagcaaatgaaccctaat
aatggttctgaggtggatgaaccattctgttcatgtgatgctgacgactcctacatctca
aagctcaatgacgcagaacatgcagaaaacctctgtcagaattgctgcaaccaatgtcaa
gaatacgacatttggaaaaatccaatttatgttgaaaagtctaaaggcgaggagactcat
aatgtcactcgggctcgttcttcttgctcaacgacttcatcctgcaggagaatcactcag
aaaaaagagtctatcgaaagcttgcggacaacatccagtgaggaatatacacagcacatc
gtacaggaggcagtgtgctactcgaagactgcggaaaacggagatgacaacagagtgaaa
tactgctctctaaggcgctgcagttgtcaaaacagtagcactgtttctgcttctgatatg
ggaaagaatcatgaaagcagagaatctacttccagtagccacagggcttcatcacgacct
tccacaggccgcagccaccagaacaatgcagtttctcaggaactcaccgacaagcagaca
tttgttaatgtttcaccaagcccctctacagctaattcaaagaagaattctgcaattaaa
tcaacagatgtaagagcaccatcacccaccagctcaatgccttcacaaaacactgagagt
actgcagaggaatacaggccagtaagtcagacctctaaatcctctgcaggtagcaagcaa
accaaagatgagaaaagttcagaagaaagagctcacagtgtgacttcaagctgttcaagt
cactcagctaaatgtagcgaccaatctgttgggaacaaccatttatctccaagaccaata
agcgctgcatcaagctgccccagccagacgagcagaaaggcaagcgctatggacaacatg
caggatgctgaggaggtccgttccatcatgtccagctattcccacaaccatgacaagaat
ctgcaagaagcaacacctgaatgtgacaggccaaagagtaaaatgtcattgtcttcagga
agatccaacacagacaaacaagaaaagcaagatgtcagcgaatccgaaaaccaatccagg
ccagggtcctccttttctggattgcaaggcagccatcctgaattgcatgtccaagacagt
gataataatgccaggccaataagcagcgtctcccatttatctaaacatttcaaacaaagc
aagcaaggtaaagttaaaatggattcagatgttgacagctcatcatctgttatcttgttc
tcatcagtgtcctcggcaccacagaacacggcaccttcactggctccagaagaagaagcg
agaccctatagtaatgcttcatgttcagaaatttcgaacggaaagaataaagtgaagctg
acagttcagcagccgtcgggctccactttctctgaaccactatcactgaatggaaacaaa
gagctcaatgttgcaaactctgacaacgaaagcataagaccctcaagctctgaatcaggg
agttgttgtaactctaaaagaaataaaagcagaatgaccaaatcagaagcggaatccagg
ccttctacgcctgcctctagtaattccaaagcagatccaaacctttgtgcagagaaacaa
gcaaatgatcaggaccaaagaccaatgtgtagtccatcaaggctgttggaatttgtacaa
gtggaaaacaatgttaaaatggagtccaagggaagtgacaaagctagtagcatttgctat
agtgtttctaaagcatctaaagccaaaattaaaagcaaacaagttaaagatgagtccgaa
gaaacaaatgcagcaaaggtggagctttcttcggctacagtggttgaagatgcagcagta
tcagttatagactctgcttctgatcaaagtacacgccagccgtctcctccaaaaggaaag
cctggagctaaaaatggaaggcagcttttaaagagctctagtcagaagtctagaagcagc
ataggtacttgctcaatagttcctggagaaataacaggtgaaaagcctccagagtccaag
ctaaatgtattgaggtctaaatctaatttaagtgaaaagagtaacgatctaaattcacac
aaagctgatgaaaacataaacaataaaagtgtcagggagaaaacaagcgaaagaggcagc
aagaaatcaaagtgtaagcacggccatcaaatcaaaaaggaccatgatgaaaatcacaca
agtactgatgcctgtgagaagaatgactttataccttctgagctgccaaatgcatcactt
gaagaggtggtccacacatggctgcaaaaaattccatcggaaaacttgcttgtgacatat
gaggaattcaaagaagggcatgagaagcctgcaaccaacgtgaccccagagggaaccaaa
gctgaagtagaagaggcgactacaacactagacgagtctaaacaggagacaatagcaggt
gaatcggagccaacagagaaaaatgacttggaggcagcaaagctggaagacagtggcagt
ctaaatgcagacaataatgatactatggaaggcagtgtcaaagacgttgtggaaacatca
caagcagagccagttaattctggcctgagtgtaacagcaaaacccaacaatccacaaaat
agagatttaccaaataatgcacattcctccattcagattatgaaggtccttctttttact
aggcagggtgcaaaattggataggtcaaacagtttgccagaattaagtcctgaacttgaa
aaaaaactaagcaagtcagctaaatcattactgacatgtcttggaaatctgcaccttttt
gatgaagaatcattacattctaaagataaatccccaaattctaataattcgagatacgaa
gaacttttgggtattctccgatcactctggctcactggcattgctgaaggtgatgaaaac
gaggcccttcatatggcagggaatcactcaaagccttttaaagtccacaactcagtagac
aaagacatcacaccaatgtcttcctctggagtagatgtcagtagtggatcagggggttca
ggagaagacagcatcggtgggacagtcaatacctctttatcaacagagaaaataaaatgt
gatttagctataaaaacatgtaccatcatgaatgagaactcaacaaagattaaacaacct
cactcagtcaaaacctcatcagatgagaaggacgaacagtattcaacatcaacaagaatg
tcgaacgtatgctgtagaaaacaaaagttaagaagttgtgagagttcacagtaccaatca
caagaaagtaacattggaaatagatcagaaacacggcagttagatgcagtatcctccagt
cctgtgacaccagatatagcatatcgtgttcagtggagcagtggtgggaaaagcattaat
aattatgatccagatgaaaatacatacagtgacactgctgaaaagcctcaagatacaata
caaaatataaaggaccaaactgatccaagtacagatgtggtgcaaacatctgatagggaa
agttgcagcatccaagaaacaatccatcaatctgaaacaacaaaccacaataggccagaa
gatgtagaagatcttgaggaacagaaaagcgtggataataaaataacggaagaatgtaat
aatgttgatgtaacagagtctccagaacaaataagtaaagataaggaatgtactgtccaa
aatcgagcagaagagaaagggtgtgtgccaccacaaaagatttcaccagatcctgagcca
gcctgggtaatgaagttactccaaaaaattgaaaagcaatttattgctcattacgtcgat
gcaatgaatgatttcaagattaagtggaacttagaaaataatgacactttagatcagatg
attgccgatttaagagaagaagttagcaggaggatccaggcaagcattaaaaaggaatta
aggaaagtgcaaggtagatcaggcaaaaaggtgccaaggcctccacaggatcaaattaga
cgtgaatcatctgagcaaacagatcaaagaagaagacgactaagggctatgtataaacaa
tctaactgtgatgataacaaaatgaacaatgctccagctgatgcaaacaaaaagaacaat
tatgaacaaaacgatacagatctcaatgaacaacttagcagtgatgaattctgtccctgt
gagagctgcgcggagaaaagcaaggcttctaaacctgaaatcaacccagtgcaatcattc
gctcctgtagttaaatattttgatctgcgagagatccttaaattgaataaagctagtaag
aatgttgaaaaaaatggcagcgacaccagtgaattgttggatagagtgagtaataagcag
gaaattgctgagcgtgagtccattggatctgttcaaaacaaagacaacacagagcttaaa
tcagaggatggagataacatggaagtgaaaactgaggatgaagaaaacatggaggataaa
atggaggagaaagagaatgtagaggataaaacagaggatgaagagaatgtagaagtgaaa
acagaaggagaggatgcaaatgataaaacagaagatggaaagaatgtagaggaaacagag
gatgaagaaaatgcagaagtgaaaacagaggatgcaggtcaagatgatgaatctgtgact
gagaatcaggaaaacattaataatgaaactgaaagccatggatcagatgaaacatcacac
caggatgaagcagaagaaacaaaaggtgaccttgataaaaatagtaatttgcaggatatt
gatgaagagcaaaatctagtggaaaaatgtgaagatgaactagaaagtccgagtggagaa
agtgaaggttcagtgaatataaaatcagatgatgccaaagaaccaactgaagatagaaag
agcaatatttgcaaaaatgaattgcaacagcaagaggatggtgataattcagaaggaatt
tctaaatgcagtgaatgtaaagctgacaatatgaagcatactacagaagaatgtactact
acacctgaggcaaatggagaacaagagaatcagaatgaagataataatccattattggaa
gacgactcggatactattgatagggacaattcacaagacaatgtgaaagagaccacagac
agcaatgttagtgcagaaaatttggatgaagtctcagaattgtctgatgaacatttagag
tccgattttgttaagaaccaaaatgaagaggaagtagaggaggttggtgtggatggaaag
ataaccaccgaacacactacatcacctgatattagctgtcaagtgcaggctgctgaggtg
cagcaagtttcggcaatggaagctcctgatggagattgcgttcaaatgaaaagtggagaa
ggcgcaagtagtacctcagataaaacagtgcccagagctactcaaatgtacccggaaagc
tcatcagatgatgatagagaaactatatgtaacagccctgaagaacctgcacatcagaaa
gatggtgaggacacagaatcagataaacaagtttctccagtgaacaagtcaaagcagcct
gtgaatgaagagtttgatgcggaagatctggacttttaa
DBGET
integrated database retrieval system
