Callorhinchus milii (elephant shark): 103185829
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Entry
103185829 CDS
T03088
Name
(RefSeq) PDZ and LIM domain protein 1 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103185829
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cmk04990
]
103185829
Domain-containing proteins not elsewhere classified [BR:
cmk04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
103185829
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4749
PDZ
PDZ_6
LIM
PDZ_2
Motif
Other DBs
NCBI-GeneID:
103185829
NCBI-ProteinID:
XP_042192921
LinkDB
All DBs
Position
Unknown
AA seq
390 aa
AA seq
DB search
MDVGHCSLVMSAFTPHPLSADSQTGTGEWLFIPAKKTITPGSKAEVAGLCVGDIILTIDG
VQTEGMTHLQAQNTIKACGDEMALLINRSESRIWSPLTKEEGKQHPYKMNLASDPERPRY
TQGTSWSAPCPPSVPGPGLRSSFSSPGSYKAAFAAVYPAAIGLARRHSTSSIPSRLRAEP
QQLKHMARFCRQGQMEVDVPGLRVLHKQFNSPLQLYSQQNILDSLQGQISSLSPMHTSVE
PVFPTPVPITHTDSEVYKMLQENQECDEPPRQSASFRVLQQILESEGNGELEKPSGFRSV
KAPASRVASSIGSGQTLPMCELCGTAIVGLMVKVREQFRHPECYTCTQCSINLKQKGHFF
VADQIFCETHAKERLPPPEGYDVVTVFPES
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgggacattgctcgctggtaatgtctgcctttaccccacaccctctctctgct
gactctcagacaggcacaggggagtggctcttcattccagcgaagaaaacaatcacgccg
ggcagtaaggctgaagtcgccggtctgtgtgtgggcgacattatcctgaccattgacgga
gtgcagactgaaggcatgacccacctacaggcgcagaacaccatcaaggcctgtggcgat
gaaatggccctcctcatcaacaggagtgagtctaggatctggtcgccactgacgaaagag
gaaggaaaacaacatccgtataagatgaacctggcgtctgatcctgagagaccacgctat
acccagggcaccagttggtcggctccgtgtccaccctcagtgcccgggccgggcctccgc
agctccttctcctcccctggctcgtacaaagctgcctttgccgctgtctaccctgcagcc
attggcctggctcggcgacacagcacctcctccatccccagccggctccgggctgagccc
cagcagctgaagcacatggcccgcttttgccgccagggccagatggaggtggacgtgccc
ggtctccgtgtcctccacaagcagtttaactccccgctgcagctctactcccagcaaaac
atcctggacagtttacaggggcagatctcctcgctcagccccatgcacaccagtgttgag
ccggtattccctacgcccgtccccatcacacacactgattccgaggtttacaaaatgctg
caggaaaaccaggagtgtgacgagccaccacgccagtccgcctccttccgggtgttacag
cagatcctggagtcagaaggcaatggagagctggagaagcccagcgggttccgcagtgtg
aaagcccccgccagcagagtggcctcctcgattgggagcgggcagacactgccaatgtgt
gagctgtgtggtactgccattgtggggctgatggtgaaggtacgtgagcagttccgacac
cccgagtgctacacgtgtacccagtgcagcatcaacctcaagcagaaggggcacttcttc
gtggccgaccagatcttctgcgaaacccatgccaaggagcggctgcctccacccgagggc
tatgatgtagtcactgtcttccctgaatcctaa
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