Callorhinchus milii (elephant shark): 103185831
Help
Entry
103185831 CDS
T03088
Symbol
ddx21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmk03009
]
103185831 (ddx21)
03036 Chromosome and associated proteins [BR:
cmk03036
]
103185831 (ddx21)
Enzymes [BR:
cmk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103185831 (ddx21)
Ribosome biogenesis [BR:
cmk03009
]
Eukaryotic type
Pre-60S particles
Helicases
103185831 (ddx21)
Chromosome and associated proteins [BR:
cmk03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
103185831 (ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
103185831
NCBI-ProteinID:
XP_042192594
LinkDB
All DBs
Position
Unknown
AA seq
736 aa
AA seq
DB search
MPARTETLPDTDSSMEPPSDAAASPERAQKHRKNKKEKKKKHSDKHQSPKEQCSQLKENG
KLEDGEETGEDSNLLPPKAKKHKTRGDARGEVSLKKSKGEKNGTGTNATVTKEIKVETIP
LSSESSCDSEVEQEPSEASEELTQEQREGAFSNFKISQETIELLKGRGVTYLFPIQVQTF
NFVYNGQDCVAQARTGTGKTFSFAIPLVEKLQSSQLERKRGRAPQVLVLTPTRELAIQVA
RDFKDVTKRLSVACFYGGTDYKPQIFSIRSGIDILVGTPGRIRDHLQNQKVDLSQVKHVV
LDEVDQMLDMGFADQVEDILGVAYKKDSQENPQTLLFSATCPPWVYSVGKKYMKGKFEQI
DLIGKRTQKAATTVEHLAIECHWSQRAAVIGDVIQVYSGIQGRTIIFSETKREVSELAVN
PYIKQDTQCLHGDIPQKQREITLKGFRDGTFGVLVATNVAARGLDIPEVDLVIQCSPPKD
VDSYIHRSGRTGRAGRTGVCICFYQRREEEQLRYVEQKAGLTFKRVGVPTTNDIIKASSK
DALKCLESVTPAAIELFNTIAEKLIAERGAVEALAAALAHISGASSIEQRSLLTSDAGFI
TLVMSCSVEMHNISLAWKELREQFGSVDDKVKRMRFLKDKMGVCFDVAVASLKELQEQWK
DSRRWQLSVATELPELEESQRDGDFRNHSFNGRGGFNRRGGGFNRRGRGGGGGGGGFNRG
RNGRGTKRSFDRAFDR
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgccggcccggaccgagaccctccccgacaccgacagcagtatggagccgccgagcgac
gccgccgcgagccccgagagggctcagaaacaccgcaagaacaagaaagagaaaaagaag
aagcactcggataaacatcagtcacctaaagagcaatgttctcagctcaaagaaaatgga
aagctggaggatggtgaggagacaggtgaagatagcaacttgttgccccccaaagccaag
aaacacaagacacgaggtgatgctcgcggcgaagtctctctcaaaaagagcaagggagag
aaaaatggaacaggcacaaatgcaacagtgacaaaggagatcaaagtggaaactatccca
ctatccagtgaatccagttgcgactcggaggttgaacaggaacctagtgaggcatcggag
gagttgactcaggaacagagggaaggggccttttcgaattttaaaatatcccaggagacc
attgagctgctgaagggtagaggagtgacctacctgtttcccatccaagttcagacattc
aattttgtgtacaacgggcaggactgcgtggctcaggccagaaccgggactgggaaaacc
ttctcgttcgccatcccactggtggagaaactgcaatcttcacagctcgagaggaagaga
ggccgagctccccaggtgctggtgctcactccaaccagggaactggcgatccaggtggcc
agagatttcaaagatgtaaccaagagactgtcggtcgcttgtttttatggtggaaccgat
tacaaaccacagatcttcagcattcgcagtggcattgatatcctggtgggcaccccgggc
cgtatcagggaccatctccagaaccagaaggtggacctgtcccaagtgaagcacgtggtc
ctggacgaggtggaccagatgctggacatgggcttcgcggaccaagtggaggatatcctc
ggggtcgcgtacaagaaagattcccaggaaaaccctcagacgctcctcttttctgccacc
tgcccgccctgggtttattccgtcggaaaaaagtatatgaagggaaaatttgagcagatt
gacttaatcgggaagcggacgcaaaaagcagccacaactgttgaacacttggctatagag
tgccactggtcgcagcgagccgcagtgattggggacgtgatccaggtctacagtggcatc
caaggccggaccatcatcttcagtgaaaccaagagggaagtgagtgagctggcagtgaat
ccttacatcaaacaggacacacagtgtttacacggagacattccacagaagcagagagag
atcaccctgaaggggttccgggatggcacatttggggtcctggtagccacaaatgtagcg
gcgagaggcttagacattccagaagtagatctggtcatccagtgctccccacccaaggac
gtggattcttacatccaccgctcaggtcgcacaggcagggcaggacgcactggagtctgc
atttgtttctaccaacgcagggaggaggagcagctgagatatgtggagcagaaagccgga
ttgactttcaaacgtgttggcgttccgaccaccaacgatatcatcaaagcatcgagcaag
gacgcattaaaatgcctggagtctgttacaccggcagcgattgaactcttcaatacgatt
gcagagaagctgatagctgagcgcggtgccgtggaagccctggctgctgccctggcacac
atctcaggagcatccagcatcgaacagcgctcgctccttacctcagacgcaggcttcatt
actttagtcatgtcctgctctgtagagatgcacaacatcagtcttgcttggaaggaactc
agggagcagttcggatccgtagatgataaagtgaagaggatgaggttcctcaaggataaa
atgggagtgtgtttcgacgtcgctgtggcctccctgaaagagttacaggagcagtggaag
gactctcgtcgctggcagctgtctgtggccactgagctgccggaacttgaggagagccaa
cgtgacggagacttcaggaaccattcattcaacgggaggggaggattcaacaggagagga
ggagggttcaacaggagaggacgaggaggaggaggaggaggaggagggttcaataggggt
cgcaatgggagaggcaccaagaggagttttgaccgagcatttgatcgatag
DBGET
integrated database retrieval system
