Callorhinchus milii (elephant shark): 103185849
Help
Entry
103185849 CDS
T03088
Symbol
ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
103185849 (ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmk03036
]
103185849 (ercc6)
03400 DNA repair and recombination proteins [BR:
cmk03400
]
103185849 (ercc6)
Chromosome and associated proteins [BR:
cmk03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
103185849 (ercc6)
DNA repair and recombination proteins [BR:
cmk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
103185849 (ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Motif
Other DBs
NCBI-GeneID:
103185849
NCBI-ProteinID:
XP_042192626
LinkDB
All DBs
Position
Unknown
AA seq
1546 aa
AA seq
DB search
MLAEAGPSNAGHHQSPSSVADLLANEAPSSPKTVEENGFHANCLDTSLASVTSDTDYSKP
STSNAFPPANMHNAFPPVDGRRGQKMVQIDRQQIQAVEQSAQAMELQGLGVDVYDQDVLE
QGVLQQVDRAISEASQATKRTDAEKEYHSVLDDLRSCTTSLKHINQIIEQLTPQCTTSKE
VSRKMESVKRQKENKEKQLKKITAKQKRLQAILGDDGVQKLETELEPYEEEPGPSSLGSM
LMPVQETEWETLIRTGQMTPFGTKIPQKQERKEPRKIMLNDTSDFEKYLADQAKMTENKR
KSFPRKGTKKKRAGAKNQGKAMTATGKDQNQTSASKTESPVSRGEQKLKKYLRKLQGKAL
KSKFKAGVPVEKSWPQGPKTWREGDGSDSGESLYVPEEELFDPDEIEYEDDEGDGFLDRH
QLNPLRKKKAQLKAQPSLSEDIDFLSSSEEDEPKGRKVNICRDDGNEDFYKKRLRSWRKK
RLKAKEECRASEENGGSDESDAEFDEGFKVPGFLWRKLYKYQQTGVRWLWELHCQQAGGI
LGDEMGLGKTIQIIAFLAGLSYSKIRTRGLNYRYEGLGPVVIVCPATVMHQWVKEFHTWW
PPFRVAILHESGSFTTRKERLIREIAACNGILVTSYSYIRIMQESIGQYKWHYAILDEGH
KIRNPNAGVTVACKQFQTPHRIILSGSPMQNNLKELWSLFDFVFPGKLGTLQVFMEQFSV
PITMGGYQNASPVQVQTAYKCACVLRDTINPYLLRRMKADVKMNLALPDKSEQVLFCRLT
EEQRQVYQTFIDSKEVYQILNGEMQIFTGLISLRKICNHPDLFSGGPKILKGMTDDHLTE
EEHFGHWTRSGKMIVVEALLRLWHKQGHRVLLFSQSRQLLNIMEMFVRNLGYSYVKMDGT
TAVASRQPLISKYNENASIFLFLLTTRVGGLGINLTGANRVIIYDPDWNPSTDTQARERA
WRIGQKKQVTIYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLCELFTLS
SPDGSQGTETSAIFAGTGSDVQVPTSHKRKVTASSGCSQRRKVPLSNQESTKHLKVLSSQ
CSSGKVKSGKLSLSSQNITKEDHKRKSETSRIPPEVKIAWLLTGSETDTENNGLNFSSTE
GHFGDSTCQEANYDSNHAEHEARASPASMDRAGISEQDLGLGWNVTGDNRRDLAWDSGIL
QNCADTAVAESRNERDGGQPHHKHRSKTKHQITGNKQDAALSARHNKGEPKERRKKHKGG
KDAFFEGERIPYLLKKQKMKKEDSDEEKAKKEGRRQTDDYVLEKLFKKSGIHSVMKHDVI
MESSNPDYVLVEAEANRVAQEALKALKASRQRCLGASSAVPTRTHSSRLTAAPAALKLRF
GQKKNPLVAVSNPSSRSTPEKCKDAAIVKKVDERSKAARSHFSGDPTETEVGPALPSSSS
LLAKMRARNYLTLFQKLEDEEEDSEPTAGPPPISTEHDELLVEMRNFIAFQASIDGQATT
QELLQEFQAKLSTAQTVIFRELLINLCTFHRTASGEGTWKLKPAFR
NT seq
4641 nt
NT seq
+upstream
nt +downstream
nt
atgcttgcagaggcaggcccctcaaatgctgggcaccatcaaagtccttcatctgtggca
gacctgctagctaatgaagcaccgtctagcccgaagactgttgaagaaaatggatttcat
gctaattgtctggacacatcactggcttctgtcacttctgacactgactacagcaagcca
tcaacatctaatgctttccctcctgccaatatgcataatgctttccctcctgttgatggg
cggagagggcaaaagatggtccagattgaccgacagcagattcaggctgtggagcagagt
gcccaggctatggagctgcaaggcttgggggttgatgtctatgaccaagatgtgctggag
caaggagttttacagcaagtggacagagccattagtgaagccagtcaagcaaccaaaagg
acagatgcagagaaagagtaccattccgtattggatgacctcaggtcctgtacaacgtct
ctcaaacacataaatcaaatcattgaacagttaacccctcaatgtacgacaagcaaggaa
gtgagcagaaagatggagtctgtgaaaagacagaaggaaaacaaggagaaacagttgaag
aagatcactgccaaacagaaacgtctgcaggcaatactcggtgatgatggcgtccagaag
cttgagactgaactggagccttatgaagaagaaccaggcccttcgtctttagggagcatg
ttgatgccggtgcaggaaacagagtgggagacgttgattcgcacaggtcagatgaccccc
tttggcacgaagatcccccagaaacaagagaggaaggaacctcgcaagataatgctgaat
gatacatcggacttcgagaagtatctagctgaccaggccaagatgaccgaaaacaaaaga
aaatcatttcctcgtaaagggaccaagaaaaagagggcaggggccaagaaccaaggcaag
gctatgactgctacaggaaaggatcaaaatcagaccagtgccagtaagacagagagccct
gtgtcgcgaggggagcagaaactgaaaaagtacttgcggaaactgcagggcaaagctctc
aagagtaagtttaaagctggggttcccgtggagaagagttggccccaaggtccaaagacg
tggcgggagggcgatggttccgacagtggtgagtcgctgtacgtgcctgaggaggagctt
ttcgacccagatgaaattgagtacgaggatgacgagggagatggattcctggatcgtcac
cagctcaatccgttgcgtaaaaaaaaggcgcaactcaaagcgcaaccctccctcagtgag
gacatagatttcttatccagctcagaagaagatgaaccaaagggtcgcaaggtgaacata
tgccgggatgatggaaatgaggatttttacaagaaaaggctcaggagctggaggaagaag
cgactgaaagcaaaggaggaatgccgagccagcgaagaaaatggtgggtcagatgagagc
gacgcagagtttgatgaggggttcaaggtccccggttttctttggagaaagttgtacaag
tatcagcagacaggtgttaggtggctttgggaattgcactgccagcaggcgggggggatt
ctaggagacgaaatgggactgggcaagaccatccagataattgccttcttggcaggcctg
agctacagcaagataaggacacgaggcttaaattacaggtacgagggattggggcctgtg
gtaattgtctgtccagcgaccgtgatgcaccaatgggtgaaagaattccacacctggtgg
ccaccattcagagtggcaattcttcatgaatcgggttcgttcaccaccaggaaggaaagg
cttattcgagaaatcgcggcatgtaacgggatccttgtcacctcttactcgtacatccgg
attatgcaggagtccattgggcagtacaaatggcattacgcaattctagatgaggggcac
aaaatccgaaacccaaatgctggcgttactgttgcatgtaaacagttccaaaccccacat
cgtattatcctgtcgggctcgccaatgcagaacaatctgaaggagctttggtctttgttc
gactttgtttttcctggaaagttaggaacgctacaagtttttatggagcaattttctgtt
ccaattacaatgggaggctatcagaatgcctcccctgttcaggtgcaaacagcttacaag
tgtgcttgtgttttacgggacactataaatccatacctgctgcgaagaatgaaggcagat
gtaaagatgaatctggcactgccagataaaagtgaacaggtgctgttttgtcgcttgaca
gaggaacagcgtcaagtgtatcaaacctttatagattccaaggaagtctaccagattctc
aatggagaaatgcagattttcactggtctgatctccctgaggaagatctgcaatcaccct
gacctcttctccggtggtcccaagatcctgaagggaatgacggacgatcatctgactgag
gaagaacactttgggcattggacgcgctccggaaagatgatcgtagttgaggctttgcta
cgcctgtggcacaaacaagggcatcgagtactgcttttctcacagtcacgacagctgctg
aacatcatggaaatgtttgtacgaaatctagggtattcctatgtcaaaatggatgggacg
accgcagtggcttctagacagccacttatttctaaatacaatgagaatgcctccattttt
ctcttccttctcaccaccagagttggtgggttgggcattaacttgacaggagcaaacagg
gtcattatctacgatcctgactggaacccaagcacggatactcaggcccgggagcgtgcc
tggagaataggccaaaaaaagcaagttactatttaccggttactgacagctggaacaatt
gaagagaagatctaccacaggcaaatcttcaagcagtttctgaccaatcgagtattgaag
gatcctaagcagagacggtttttcaagtctaatgatctttgtgagctttttacactaagc
agcccggatggttctcaggggaccgaaaccagtgccatttttgcaggcacaggctcggat
gttcaagtgcccacctctcataaaaggaaagttactgccagctctggttgttcccaaagg
agaaaagtgcctttgtcaaatcaagagtccactaaacatctcaaggtgctatcttcccag
tgttcgtcaggcaaagtcaagtcaggaaagctgtctctcagttcacaaaacataaccaaa
gaggatcataaaagaaagtctgaaacatctcggataccaccagaagtcaaaatagcttgg
cttctgactggatcggagactgatacagaaaataatggcttgaatttttcctccactgag
ggacattttggagattctacatgtcaggaagcgaactacgattccaatcatgctgaacac
gaggcccgagcatcgcccgcgtccatggaccgagctggaatatctgagcaagaccttggg
ctgggatggaacgtaacgggagacaatcgaagagaccttgcttgggattcaggaatactg
cagaattgcgctgacactgccgtggctgaaagtagaaatgagagagatggtggtcaaccc
catcataaacaccgttccaaaacaaaacatcaaataactggtaacaagcaggacgcagct
ctgtcagcccgccacaataagggtgagccaaaggagaggcgcaaaaagcataagggcggc
aaagatgccttcttcgaaggtgaacgcatcccgtacttgctaaagaagcaaaaaatgaaa
aaggaggacagtgacgaagaaaaagccaagaaggaaggcaggagacagactgatgattat
gtgttggaaaagcttttcaagaagtctggaatccacagtgtgatgaagcatgatgttatt
atggagtcatccaaccctgattatgtattagttgaagcagaagctaatcgagttgctcaa
gaggctttgaaagcgctgaaagcctcaagacagcgttgcctgggtgcctcttctgccgtg
ccaaccaggacacacagtagtcggctgacagcagcaccagctgctttaaaattgagattt
ggtcagaagaaaaatccactcgtggctgtcagcaatccctcctctagatctactcccgaa
aaatgcaaggacgctgccattgtgaaaaaagttgacgaaaggagcaaggctgccagatct
catttcagcggtgatccgaccgaaacggaagtgggccctgcattgccatcatcctcctcg
ctgctagccaagatgagagctcgaaactacttgacccttttccaaaagcttgaggatgaa
gaggaggactctgagccaacagcagggccacctcccatctcgaccgagcacgatgagctg
ctggtggaaatgcggaacttcatagcattccaggctagtatcgatggacaagccacaact
caggagctgttacaagagtttcaggcaaagttatcaactgcacagacagtgattttccga
gaacttctcattaacctgtgcacttttcacagaaccgcatctggagaagggacctggaaa
ctaaagccagcatttcgatga
DBGET
integrated database retrieval system
