Callorhinchus milii (elephant shark): 103185907
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Entry
103185907 CDS
T03088
Symbol
katnb1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cmk04812
]
103185907 (katnb1)
Cytoskeleton proteins [BR:
cmk04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
103185907 (katnb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Katanin_con80
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_HPS5
eIF2A
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_IP5PC_F
Beta-prop_LRRK2
Beta-prop_DCAF12
WDR54
Beta-prop_RIG_1st
Ge1_WD40
Beta-prop_NOL10_N
Cytochrom_D1
VPS8_N
Motif
Other DBs
NCBI-GeneID:
103185907
NCBI-ProteinID:
XP_007902852
UniProt:
V9KBT4
LinkDB
All DBs
Position
Unknown
AA seq
659 aa
AA seq
DB search
MAASGPTKIAWKLQEFVAHASNVTCLVLGKHSGRLLATGGDDCRVNLWSVSKPNCIMSLT
GHNTPVECIQFKDTEELVVAGSQSGSLRIWDLEAAKILRTLSGHKANVCSLDFHPYGEFV
ASGSMDTNIKLWDIRRKGCVMTYKGQSNAVRCLRFSPDGRWIASAGDDGIVKLWDLSAAK
VLTEFREHTGPVNIVEFHPNEYLLASGSSDRTIKFWDLEKFKMVSCTEVENSPIRCILFS
MDGCCLYSGSQDSLHVYGWEPPRCFDVVPVNWSKVSDLSTCSNQLIGASCSQMTVSTFVV
DLNRVKKSGSIVQGEIEDEKLFNLLTPKGAALRRNYERPLTTCSRPQSKVKEEPESEQRS
PSGEEDKDDKESTAEIRNPEEYKEIFQPKSAIARTPPRRNDPFPAPPEDDNVPLLKEVEK
VNPASEMQSAAMKRAQPDQLNLLPVASSTPINRVAEPIIPLAKNEPIGLKVADFLPPQKN
NKLADLTDEDAVSQIRKGHDTMCVILTSRFKNLDMVRAMWTTGDVKTSIDSAVTMNDLAV
MVDILNIINLKPALWKLDLCSSIIPQIEKLLQSKYESYVQTGCMSLKLILQRFGPLIADN
LVTPPSIGVDITREERQHKCKLCYKQLKNLVPILQSKAGLAGRQGSAFRELQLLMASFE
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtcaggtcccaccaagatcgcctggaaactccaggaatttgtggctcatgcc
agtaatgtcacgtgtctggtgctggggaagcattcaggcagactcttagctaccggtgga
gatgattgtcgggtcaatctgtggtcggtcagcaaacccaactgtatcatgagtctgacc
ggccacaatactccagtggagtgtatacaattcaaggacactgaggagctggttgttgca
ggctcacagtctggatcattaagaatatgggatttggaagcagccaaaattcttcggaca
ttatcaggacacaaagctaacgtctgcagtttagacttccatccttatggcgagtttgtg
gcatctggttcaatggacaccaatataaagctatgggacattcgacgaaaaggctgcgta
atgacatacaagggccagtcaaatgctgtccggtgtttaaggtttagtcctgatggacgg
tggatagcctctgctggggatgatggcattgtgaagctatgggatctctcagccgcaaag
gttctaacagagttcagagaacacaccggaccagtaaacattgtggagtttcaccccaac
gagtatcttctggcttcaggcagttcggacaggacaataaagttctgggatctggaaaag
tttaagatggtgagctgcaccgaggtggagaactctcctatcaggtgtattttattcagc
atggatggctgctgtttgtacagcggttcccaggactcgctccacgtttatggctgggaa
ccccctcgttgtttcgatgttgtgccagtaaactggagtaaagtgtctgacctcagcacc
tgctccaaccagttgatcggtgcctcctgcagtcagatgactgtctcaacattcgtggtg
gacctgaatcgtgtgaaaaagtcaggttccatagtccagggtgagatcgaagatgagaaa
ctgttcaatctgttgacaccgaaaggagctgctctcagacgcaactatgaacggccactg
actacctgcagcagaccgcaaagcaaagtgaaagaggagccagagagtgagcagcgcagc
cccagcggggaagaggacaaggatgataaggagtcgacagcggagattcgaaatcctgag
gagtacaaagagatttttcagccaaagagtgccattgctcggaccccacctcggagaaac
gatcccttccctgctcccccggaagatgataatgttccacttttgaaggaagttgagaaa
gtcaaccctgcatcagaaatgcaatctgctgccatgaaaagagcccagccagatcagctg
aatttacttccagtagcttcatccacccccatcaaccgggtcgcagaacccataatccca
ctcgctaaaaatgagcccattggattgaaggtggcagactttctcccacctcagaagaac
aacaagttggcggatttgactgatgaggatgctgtcagccagatccgaaaaggacacgac
acaatgtgtgtgatattaacaagccgcttcaagaacctagacatggtgagagccatgtgg
accactggagatgtcaagacctccattgactcggctgtaacgatgaatgatttagcagtc
atggtggacatcttgaacataattaatctcaaaccggccttgtggaagctggacctctgc
tcttccattattcctcagatcgagaaactgttgcagagcaagtatgagagctacgtacag
acaggttgtatgtccctcaaattgatcttgcaacgatttggacccctgatagcagataac
ctggttacaccaccatccattggcgtggacataactcgagaggagaggcagcacaaatgt
aaactctgctacaaacagttaaagaaccttgttccaattcttcagagtaaagcagggctg
gctgggcgccagggcagtgcctttcgtgaactgcagcttctcatggcgtcttttgaatga
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