Callorhinchus milii (elephant shark): 103186082
Help
Entry
103186082 CDS
T03088
Symbol
ciita
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cmk01001
]
103186082 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cmk04054
]
103186082 (ciita)
Enzymes [BR:
cmk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
103186082 (ciita)
Protein kinases [BR:
cmk01001
]
Serine/threonine kinases: Other
TAF1 family
103186082 (ciita)
Pattern recognition receptors [BR:
cmk04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
103186082 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_14
NB-ARC
nSTAND_NTPase5
LRR_8
CARD
AAA_16
nSTAND3
Motif
Other DBs
NCBI-GeneID:
103186082
NCBI-ProteinID:
XP_007903097
LinkDB
All DBs
Position
Unknown
AA seq
1423 aa
AA seq
DB search
MTALLFQVLLMGQAGLSCHQPASLYGYQTQPWIYECAFKNQNPDNTFQQQLSQASGFPHQ
LSDRLLPSAEHVKEIIQAVYTDQFRVLLDDLLEKGLVTKDSYRHYNQCDIEDLPRVILVS
VLGKEESYCQAFLSILCVHFPWICEEIQQDSADDRLMWANEPSVTMRNHSELVELPLLKD
LSFLGLLQDDYGPRQMSSPIISGQCGDSVYETDLDINQCELNMCILDDIVNPGTSLDQYE
EGIEGILKYLQDPRPLNTIALEQYFDNDLLLETQEFVMCRAPTDPSDDDSSCSADDQLPD
QSSPGIPCTRRRGRKRATSSSSPTEEQETITQATSIKKPKPSGAEPDAEATEVNKVNCRE
SPSPGEEVPSQILPDVEALLVSPGCAVETETPDSIVSMSYSPGPEALPTIPPTADTQHPV
SPSTSLGNGLSGLPLSPGVIQLITSCSFPQQVISFPFSGTIQSGIATYFIVANKSLPRAP
ELPLTVLSPTLSSAASGQSCAPPSETSWQVDPSPAALQPDPPVSPKPAPHTPLKAESPPE
PLTSSLPADSPTPPASIQAEGPVPDRESPGEGFPEPVTPTVKQFIKTKAVEDCTVTVKEY
LKDMSQHSYICHEHDEMHLEDIYVDITLVEGQVETKSGRKSNKGLDKACKIYNIDEGEHA
AISTDNLFDFSEREQRETKVIALLGRAGIGKSVLVQRVCLDWVNGSFGQFEFVFWFKCRT
LNLEKQYKLRDLLFEPFLPALRDTGEVFQYLCHHPDKVLVIVDDFEDFQDCDGLLQPTTC
PSREKPQSVRQLLAGLLQKKLLRGCTVLVTARPRGTFNQYLTRVDKVVEVMGFSPQHREE
FVRKYFEDSSLAVKVSECLQQHRFMLSFCFIPLFCRFLCFILKAKHRAGDKCLTLPATLT
SLFQSIFQVLLQSGAYTRSGTQTPALLAKHKANLLRLSTLAYSGVQSHSSVCAESETAAM
TNFALKHGFLRPFLMNGQEREQECGKAFSHSALQNFLGAMYLLFSEDVKCKGLLRIIMLE
QKKKRSQEDWLDIVRRALVGLAFQEGSDFIDCFVNNPKNKVKSKKQKSLQRYLGELDTSA
LSGVRLLELCHCVHETQNPELATRVASKLNETLSFLRTRLTPPDIFVLLHLMQKSPRKFC
IDLRETGIDLPGIRQFVELKNVTSFRVSVTDAVKLWEHLEQTGEEELLHTSLLKFSVNPF
EVNSLKDIDDLDLLVQLHKGRRFLSCAKNACGSELHELPAVSSLQTLEFALGPVIGPQGF
QKLAKILPALQSLKSLDLEGPSAQKIKLSENQIGDEGAERLAEVLSELTSLEKLTLSRNQ
ITDRGAQTLARSLPKLKSLRTLSLYDNIIGDKGAEKLAEILPAMTSLKVLDVQFNNITDV
GAQSLTHSLKNCPHMESIWLWSPTIPHWVSDHLKQIDVRINLQ
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atgactgctctgctcttccaagtcctgctgatgggccaggctggcctgagctgtcatcag
cctgcttccctctatggataccagacacagccctggatatatgaatgtgcattcaagaac
cagaatccagataacaccttccagcagcagttatctcaagcctcagggtttcctcatcag
ctatctgacagactcttgccttcagcagagcatgtgaaagaaattatacaggcagtttat
acagaccagtttcgagtcttactggacgatttattggaaaagggtctggtaacaaaggat
agttaccgtcattacaaccaatgtgacatcgaagacttgccacgcgtcatcctcgtgtct
gtcctcggcaaagaggaaagctactgtcaagccttcctctctatcctctgcgtccacttc
ccatggatctgcgaagagattcaacaggactctgcggacgacaggctaatgtgggcaaat
gaaccctcagtcacgatgagaaaccacagcgagttggtggagctcccgctcctgaaggac
ctgagttttctgggtttgctgcaggatgactatggaccacggcagatgtcttcgcccatc
atcagcgggcagtgtggagactcagtttacgaaacagatctcgacattaatcagtgtgag
ctgaacatgtgcattttggatgatatcgttaacccggggacaagcctggaccaatatgag
gaaggaatagaagggattttaaagtatttgcaggatccacgacctctgaatacaattgcc
ttggagcagtactttgataacgatctattgctggaaacccaggagtttgtgatgtgcaga
gctccgacagaccccagtgatgacgacagctcgtgctccgcagatgatcaactcccagac
cagagttccccgggcattccctgcacaaggaggagaggcaggaagagagcgaccagcagc
tccagccccacagaggagcaagagaccatcacccaggccacgagcatcaaaaagccaaag
ccttcaggagcagaacctgatgctgaagccactgaagtaaacaaggtgaattgccgagag
tcaccctcccccggagaagaggttccatcacagatactacccgatgtggaggccctgctc
gtttctccaggatgtgctgtagagacagagacaccagacagcattgtgtcaatgagctac
tctccagggccagaagcccttcctacgatcccgcccaccgcagacactcagcacccagtg
agcccctccaccagcctaggaaatgggttgagcggcctgcctctcagcccaggggttatc
cagctgatcacgtcctgctcgttcccacagcaagtcatcagcttcccattcagtggcacc
atccagtcgggtatcgccacttacttcatagttgcaaacaagagtttacctagagctcct
gagctgcctctgacagtattgtctcctacactttcctctgctgcttcaggtcagagctgt
gctcctcccagtgagacgagttggcaggtggatccatcgcctgctgccctacagccagac
cctccagtcagcccaaagcccgctcctcacactcccctcaaggctgagagtcccccagag
cccctcaccagctccctgcccgcagacagccccacccctccagccagcatccaggcggag
ggaccagttccagacagagaatcacccggtgaaggcttcccagagccggtcactcccaca
gtgaaacaattcatcaaaacaaaggcagtggaagactgcacggtgactgtgaaagagtat
ttgaaagacatgagccaacattcctacatttgccacgagcacgacgagatgcacctggag
gacatttatgtggacatcacattggtggagggacaagtggagactaaatcaggtcggaaa
tccaacaagggcttggacaaagcctgcaagatctacaacattgacgagggagagcacgca
gccatcagcaccgacaatctctttgacttctccgagagagagcagagagagaccaaagtg
attgctctgctgggcagagcgggcatcggcaagagcgtgcttgtccagagggtctgcctt
gactgggtgaacggaagctttgggcagtttgagttcgtcttctggtttaagtgcaggacg
ctgaacttagagaagcagtacaagctgagagatttactcttcgagccgttccttcccgcg
ctgagggacacgggcgaagtgtttcagtacctctgccatcaccccgacaaggtcctggtc
attgtggacgattttgaggattttcaggactgtgatgggctcctgcagcccacgacctgc
ccgtccagggagaagcctcagagcgtccgacagctcttggctggcctcctgcagaaaaag
ctgttgaggggatgcacggtgctcgtcaccgcccggcccagagggacattcaaccagtac
ttgaccagagtggacaaggtggtcgaggtgatgggattcagtccacaacacagagaggaa
tttgtacggaaatactttgaagactcgtcgctggccgtgaaggtgtctgagtgcctccag
cagcatcgcttcatgctcagcttctgtttcatccccttgttctgcaggtttctctgcttc
atcctcaaggccaagcaccgggcgggtgacaagtgccttacgttgccagccactctcacc
agcctctttcagagcatctttcaggtcttactacagtccggtgcatatacccgctctggc
acccagaccccagctctgttggcgaagcacaaagccaacctgttgaggctgagtacgttg
gcctacagcggagtccagagtcacagcagcgtgtgtgcggagtcagagaccgcagctatg
accaactttgccctgaaacacggtttcctcagacctttcctgatgaacggccaagagagg
gagcaggaatgtgggaaagccttttcccactcggcgctgcagaacttcctgggagcgatg
tatctgctgttctccgaggacgtgaagtgcaaaggcctgttgaggattatcatgctggag
cagaagaagaagagatctcaggaggactggctggacattgtgcgcagggctttggtgggg
ctggcgtttcaggaagggagtgactttattgactgtttcgtcaacaatcccaagaacaaa
gtcaagagtaagaagcaaaagtctttgcagaggtatctgggtgagctggataccagtgca
ctgagcggggtcaggctgctcgagctctgccattgtgtgcacgagacccagaaccctgaa
ctggccacacgagtcgcctccaaactgaacgagaccttgtccttcctcaggactcggctg
actccgcctgacatcttcgtgctgctccacctgatgcagaagtctcccaggaagttctgc
attgacctgagggaaacaggcatcgacctgccggggatcaggcagtttgtggaactcaag
aatgtcacgtcgtttagagtgtcagtaacggatgcggtgaagctgtgggaacatttggag
cagactggagaagaggagctgctgcacacctctctgcttaagttttctgtcaaccctttt
gaggtcaacagtttgaaggatatcgatgaccttgatttactggtacagcttcacaaaggc
agaagattcctttcatgcgcgaaaaacgcctgtgggagcgaactccacgagctcccggct
gtcagctccctccagaccctggaatttgcacttgggcctgtgatcggacctcagggattt
cagaagctggcaaagatcctcccagcattgcagtccttaaagtccctggaccttgaagga
ccgagtgcacaaaagattaaactgagtgaaaatcaaattggagacgaaggcgctgagaga
ctggcggaggtgttgtctgaattaacatcgctggagaagctgacgttatcacggaaccag
atcactgaccgcggggcacagactctggccagatctctgcccaaactgaagtccttgagg
acattgagtttatacgataacattataggtgataaaggagcagagaaactggcagaaatc
cttccagcaatgacatcgctgaaagtgctcgacgttcagttcaacaacatcactgatgtc
ggagctcagagtctaacacacagtttgaagaactgcccgcacatggagagcatctggttg
tggagtcccaccatcccccactgggtgtccgaccacctgaaacagattgacgttagaatc
aacttgcagtag
DBGET
integrated database retrieval system
