Callorhinchus milii (elephant shark): 103186261
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Entry
103186261 CDS
T03088
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X2
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103186261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmk03021
]
103186261
03036 Chromosome and associated proteins [BR:
cmk03036
]
103186261
Transcription machinery [BR:
cmk03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103186261
Coactivators
SAGA/TFTC/STAGA complex
103186261
Chromosome and associated proteins [BR:
cmk03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
103186261
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
103186261
NCBI-ProteinID:
XP_007903355
LinkDB
All DBs
Position
Unknown
AA seq
1133 aa
AA seq
DB search
MAAGAPDLLDDVFFSDVDEKVVSDLVGSLETQLAASGHSAAEEPGSRAQALNNHVENTGG
SGGGGGSGSGVSNNVQLPPTAENKMGLAGAGLPNAASVKVEAAPGGKNAQITSQNAFVGG
GALPCPVAGTAGSGLQPSVVLNNTRSQAPGVEQEQNTAAAAVTGSSSSSSSSSSSSSSET
PASGSIAQGKSVVISAMAPPVSNHVKTVTSNVQTLNGNNGMLINSHNAGSATTFTCSAAA
TTTLPAVTVVNNGPGSVVKGTMNAALPAASLPASSSAYTVIQTSFVSTQNVPTSTVVSSP
AAGPTVTLVRPPAHSAATLPVASTPNGSSTILNSTVNVTNLPAPGGAGTSHQTSLLTLNS
QPSLSSNVSLSAGGQVIKSDSQQPKTIIQTPQQTIGTGMLTTTGSTVVSVSNQSNTSTMV
IGQPMQSGIQNVAPNPGGISTQPAGTPTGMAKGTICTVAQTLARTAAVNTGPRTTITPQI
IAPRLPQPPQHQPNIQNIQIPPGMVLVRSDSGQLMLIPQQALQQMQSQAQSQGALTSRSA
TPGSAPPVQISTVQAPGTQIIARQVTPTIIKPVSQPQTTVQQTTTLQRPPTVQSQIVISG
ATSTATTVQPGTPQRTAAGPATSQILQPSPSATAETMENVKKCKNFLSTLIKLASSGKQS
TETAANVKELVQNLLDGKIEAEDFTSRLYRELNSSPQPYLVPFLKRSLPALRQLTQDSQA
FIQQSQLQQPSTQTTTALTAVVLGNTVPQRSTVRTATATVTSTLQHPVLSLAQTGQAGQS
KAGQPTQLVVQPQSQQGTLVRPQVTLTSAPMVTLRQPQNRIMLTAPPQVQLKQFHQTVPV
MKQTVVSGNKAGVTYSVQTSVVQKNKLKEAAGGSFRDDDDINDVASMAGVNLSEESARIL
ATNSELVGTLTRSCKDEAFLFNAPLHRRILEIGKKHGITEIHPDVVSFVSHATQQRLQTL
VEKISEVAQQRNISYKEDDRYEQLSDVRSQLKFFEQLDQMEKQRKDEQEREILMRAAKSR
SRQEDPEQLRLKQKAKEMQQQELAQMRQREANLTALAAIGPRKKRKVDSPGPGTGSGTEG
TSPGGTPGGSGVGTTRQFARQRITRVNLRDLIFCLENERETSHSLTLYRAFLK
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggggctccagatctgctggacgatgtgttcttctcggacgtggacgagaaa
gtggtgagcgacctggtgggctccctggagacccagttggcggcctcgggtcacagcgcg
gccgaggagccgggcagcagggcccaggccctgaacaatcacgtggaaaacacaggcggg
agcggcggcggcggcgggagcgggagcggggtgagcaataatgtccagctgccaccaaca
gcagagaacaaaatgggactggcaggagcggggctccccaacgcggccagtgtcaaagtg
gaggcagccccggggggcaaaaacgcacagattacctcgcagaacgcgttcgtcggcggc
ggggctttgccctgcccggtggcggggacggcgggaagcgggcttcagccaagtgttgtt
ctcaataacaccaggtcccaggctccgggagtggaacaagagcagaacacggcggcggcg
gcggtgacaggatcttcctcctcctcctcctcatcctcctcctcctcctcatcggagacg
ccagcttcaggcagcatcgctcaagggaagtcggtggtgatcagtgcgatggctcccccg
gtctccaaccatgtgaagactgtcacctccaacgtacaaactctgaacgggaataatggg
atgctgatcaactctcacaatgcaggaagtgccaccactttcacttgctcggcagctgcg
actactaccttaccagctgtcacagtggttaataatggacctggatctgtggtgaaaggc
acgatgaatgcagctttgccagcggcgtctttaccggcctccagttctgcctacacagtt
attcagacgtcttttgtcagtacgcagaatgttcctacttcaactgtcgtttcctcaccg
gcagctggacccacggtgacattggttagaccaccagctcacagtgctgctactctgccg
gttgcctccacgccgaacggtagcagtacaatattgaactcgaccgttaatgtcacaaac
ttgccagctcctggtggcgccgggacttctcatcagacttcacttctgactttaaacagt
cagcctagtttgtcaagcaacgtgtctttgtctgctggcgggcaggttatcaaatccgat
tcacaacagcccaaaactattatacagacaccacaacagacgatcggtactggaatgtta
acaacaactggtagtactgtagtcagtgtaagcaatcagtcaaatacgagtactatggta
ataggtcagcccatgcaaagtgggatccagaatgtggcacccaatcctggaggaatttcc
acacagccagctggtacaccaacaggcatggccaagggaacgatttgcacggttgcccaa
actctagcaaggacagcagcagtgaacactggtccaaggacaaccataacaccacaaata
atagctccccgcctccctcaacccccacagcatcagccaaacattcaaaatattcagatt
cccccaggaatggttcttgtgcgcagtgacagtggccagttgatgctgatccctcagcaa
gctctacaacagatgcagtcacaagctcagagtcaaggggctctcacctcacgctcggca
acaccaggcagtgctcctccagttcaaatttcaactgtacaggcaccaggaacacaaata
attgcacgtcaagtgacaccgacgatcattaagccggtttcacagccacagacaacagta
caacaaacaacgacattgcagcggccacccactgtacagtctcagattgtaataagcggg
gcaacatcaacagcaacaacagttcaaccaggaacacctcagagaacagcagcagggcca
gcgacctcgcagatactgcagccttctccctctgctactgcggaaactatggaaaatgtc
aagaaatgcaagaactttctgtccacgctgatcaagctagcttcaagcggcaaacagtca
actgaaacggctgctaacgtcaaagaattggtgcaaaacttactggatgggaaaattgaa
gctgaagacttcactagtcgactatacagagagctaaattcctcgcctcaaccttatctt
gtgcctttcctgaagcggagtttgcctgccttgcgccaacttactcaagactcgcaagct
ttcattcagcaaagtcaacttcagcaaccttcaactcagaccacgacagccctgacagca
gtcgtactcggaaacacagttccacagcgctccacagtgcgaacagctacagccacagtg
accagtaccctccaacatcctgtgttaagcttagcacagactgggcaagcaggacagagc
aaagcagggcaaccaacacaactggttgttcagccacaatcgcagcaaggcaccctggtg
agaccacaggtaacactgacatcagcacccatggtaacgcttcgacaaccacagaaccgc
atcatgttgacagctcctccgcaggttcagttgaagcaatttcatcaaacagttcctgtt
atgaaacagacggtggtgtcgggaaataaagctggcgtgacctactctgtccagacctca
gttgttcagaagaacaagcttaaagaagcagcaggtggttcattcagggacgacgacgac
atcaatgatgtggcgtccatggctggagtcaacctctcggaagaaagtgcccggatcttg
gcaaccaattcagagctggtgggcaccctgaccagatcgtgtaaagatgaggcattcctg
tttaatgcaccgttgcacagaagaatattagaaataggaaaaaaacatggaataactgaa
attcatcccgatgtagtaagttttgtgtcacacgcaacccagcagaggttacaaacactt
gtagaaaaaatatctgaagtcgcccaacagagaaacatttcgtataaggaggatgacagg
tatgagcagttaagtgatgtaaggtcacagctaaagttctttgaacaactcgatcaaatg
gaaaagcagagaaaagatgaacaagaaagggaaattttaatgcgagcggcaaagtctcgc
tccagacaagaggacccagaacaactgaggctaaaacaaaaggccaaagagatgcaacaa
caggagttggcacaaatgagacagagagaagccaacttaactgcattagctgccatcggt
cccagaaagaagcggaaggttgattcaccaggacctggcactgggtcgggaacagagggt
accagccctggagggacaccgggtggctctggagttggaacaactcggcagttcgcacgg
caacgaataacaagagtcaacctcagggaccttatattctgcttggagaatgagcgagag
acgagccattcactaacactataccgtgcattccttaaataa
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