Callorhinchus milii (elephant shark): 103186321 Help Entry 103186321         CDS       T03088                                  Symbol htt Name (RefSeq) huntingtin   KO K04533   huntingtin Organism cmk  Callorhinchus milii (elephant shark) Brite KEGG Orthology (KO) [BR:cmk00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cmk03019]     103186321 (htt)    04131 Membrane trafficking [BR:cmk04131]     103186321 (htt)    03029 Mitochondrial biogenesis [BR:cmk03029]     103186321 (htt) Messenger RNA biogenesis [BR:cmk03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      103186321 (htt) Membrane trafficking [BR:cmk04131]  Endocytosis   Rab GTPases and associated proteins    Rab associated proteins     103186321 (htt) Mitochondrial biogenesis [BR:cmk03029]  Mitochondrial quality control factors   Regulator of mitochondrial biogenesis    Other regulator of mitochondrial biogenesis     103186321 (htt) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Htt_C-HEAT Htt_N-HEAT Htt_bridge Htt_N-HEAT_1 HEAT HEAT_2 Vac14_Fab1_bd CLASP_N Rad26-like_helical_rpts SbcD_C Motif Other DBs NCBI-GeneID:  103186321 NCBI-ProteinID:  XP_042198845 LinkDB All DBs Position Unknown AA seq 3168 aa AA seqDB search MATMEKLMKAFESLKSFQQGPPSEEPGQKQKKESATTKKDRVTHCLTICENIVAQSLRNS PEFQKLLGIAMEMFLLCCDDTESDVRMVADECLNKIIKALMDSNLPRLQLELYKEIKKNG PSRSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLARISKRPEEAVQETLANSVPKIMAA LGNFANDSEIKMLLKTFIGNLKSSSPTIRRTAASSAVVICQHSRRTQYFYTWLLNVLLGF LVPVEEDRPTPLILGVMLTLRYLMPLLRQQVKDTSLRGSFGVTRKEAEISPSLEQLIQAY ELTLHYTQHRDHNVVTAALEMLQQLFRTPPPELLQALTTPGSITRVSIARDETTNRLRSG SIVELIAGGGXSCSPVLLRKPKGKVVCGQEEGLEDEAETRSEISGASFPGGTTFPGSVNN EEAAEIPSSSGISTIGSTSPLPDSAGHDIITQQPRSQHTLQAAESVDLNSSTVTSDLTNV ANEGEDDDILSRSSSQISTIQSDTTIDLNDQTNQTTSPLSESSQTTEGPDSAVTPSDSSE LVSVQRAEGGSQSSTEGPDISPSSPMEGPDSDTSTFSSSSASSSEKVLDGTDSQYSAMQI GQLQDEEEDSTNPPGEELQDGFTTSSLAVNKPHLLSHLGHSRQSSDSSVDRFVSKDDCVE SADLEIKPCRIKGDIGHYTDENAAPLIHCVRLLTASFLLTGQKKGLIPDREVRVSVKALA VSCVGAAIGLHPEAFFSKLYRTPLEVSETQEEQYVSDIMKYVEHGDPQIRGATALLCSTF IHSVLTKTRFHPDTWLANIRSTAGYNVSLEDCVPLLQKTLKDKSSVTCKMACAAVRHCIT SLCNSSYSELGLQLIIDLLTLKNNSYWLVRTELLETLAEMDFRLAGFLERKTVELHKGDH HYTGMLKLQERAINDVVINLLGDEDPRVRHVAATTLVRLVPRLFFDCDQGQSDPVVAIAR DQSSAYLQLLMHETQSPSHFAVSTITRTYRGFNISQSTTDVTIENNLSRIITAVSHALTS STSRALILGCCEVLCLLSLNYPVCNWSIGWHCGYTATSSQASRVHLYKNRGRSFSVSQNS PTDDSRKGCTVGMVNMILSLLSSAWFPLDLSSHQDALILSGNLLSAIAPKSLKNPWGTED DTGVSNKQEEPWPALADRTLVGMVEQLFSHLMKVINICAHVIDDVAPGPALKATLPSLAN TPSLSPIRRKGKERESVEQTTAPMSPKKITESNQAARPTDTVGAAPTSKSTSVGSFYHLP PYLKLHDVLKATYANYKVTLDLQNSNEKFGNFLRAALDVLSQLLEIATLPDIGKCVEEIL GYLKSCFSREPMAVIICVQQLLKTLFGTNLASQYDSCSSNPSKSQGKVQRLGSSNLRPGL YHYCFMAPYTHFTQALADASLRNMVQAEPEQDTSGWFDVLQKVSTQLKCNMTNVTRHRAD KNMIHNYIRLFEPLVIKALKQYTTTTSVFLQRQVLDLLAQLVQLRVNYCLLDSDQVFIGF VLKQFEYIEVGQFRESEMIIPNIFFFLVLLSYERYHSKPIIGIPKIIQLCDGIMASGRKA VTHAIPALQPIVHDLFVLRGTNKADAGKELDTQKEVVVSMLLRLIQYHQVLEMLILVLQQ CHKENEDKWKRLSRQIADMILPLLAKQQMYLDSHEALGVLNTLFETVAPSSLRPVDMLLK SMFVMPATLISVGTVQLWISGILAILRVLISQSTEDIVLSRVQELSLSPYFISSQNINRL RERGNQVSPAEEQNEETLSKHSPEEIFARFLLQLVGILLEDIVNKQLKVDMSEQQHSFYC QQLGTLLMGLIHIFKSGTFRRITAAATKLIKGDGSDGNFSTLDSLNILVQSIIPTHPSLV LLWCQILLLMNYTNYKWWSEVHQTPKRHSLSSTKLLGPQISEENEETKSASKLGMCNREI VRRGALILFCDYVCQNLHDSEHLTWLIVNHVQDLINLSHEPPVQDFISAIHRNSAASGLF IQAIQSRCDNLTTPTMLKKTLQCLEGIHLSQSGAVLMLYVDKLIRTPFRVLARMVDTLAC RRVEMLLAENLQNSVVQVPREELERIQRYLQNTCLAQRHQRLYSLLDRFRTTIATDTVSP SPIVTSHPLDGDKLSAVESIVVDKEWYVALVKSQCCNRVTTTLMECTELLSKLPEADLHT IITVKEFSLNLLTPCLALGLQEISMEKSSILFETARKITLDHMTVRVQRLPSSHQVFQMV HPWQNSFYWNKIDELYGDVLFYQTVLRLCSAVAQYLLSLPKLPAALQIPTDKEADIAKFV VLSLEAVSWQLMHDQVPLSLDLQATLDCCCLALQQPAIWNLLASAAYVTQACSVINCIRF IIEAVAVEPGDELLHLEDKRKSKNRNEDEEATNVSERAKYIATACEVMAEMVECLQSVLF FGHPSNNRIPAFLTPPLRNISINLARLPLVNSYTHAPPLVWKLGWSPSPGGEFGTVLPEI PVEFLQEKEVFKEFIYRINVLGWTSRTHFEETWATLLGVLVTQPLAMDQEEEVPQEEDTE RTQINILAVQAITSLVLSAMAIPAAGNPATSCLEHQPRNKTLKSLDTRFGRKLTLIRGIV EQEIQAMVSKRDNIASHYPYQAWDPVPSLSASTTGALISHEKLLLQINTEREMGNMNYKL GQVSIHSIWLGNNITPLREEEWDEDEEDETDVPVPSSPPTSPINSRKHRAGVDIHSCSQF LLELYSQWILPTNTGKKTPVVLISEVVRSLLAVSDLFTERNQFEMMYSTLTELQKLHPAE DEILNQYLVPAVCKAAAVLGMDKAIAEPISRLLETTLRSTHMPSRIGALHGILYILECDL LDDTAKQLIPIISDYLLSNLRGIAHCVNIHNQQHVLVMCATAFYLIENYPLDVGPEFTAG IIQMCGVMISGSEESTPSIIYHCVLRGMERLLLSEQLSRLDGEALVKLSVDRLNMHSPHR AMAALGLMLTCMYTGKEKGSPGRITETDSTAPDSESVIVAMERVSVLFDRIRKGFPCEAR VVARILPQFLDDFFPPQDVMNKVIGEFISSQQPYPQLMAAVVYKVFQTLHNTGQSSMVRD WVMLSLSNFTQRTPVAMAMWSLSCFFVSASTSTWISALLPHIVSRMGKSDQIDVNLFCLL AMDFYRKQIEEELDRRAFQSVFEVVATPGSPYHQLLTCLRSFHQVAEL NT seq 9507 nt NT seq  +upstreamnt  +downstreamnt atggcaaccatggagaagctgatgaaggccttcgagtcgctcaagtcgttccagcagggc ccgcccagcgaggagcccgggcagaagcagaagaaagaatctgccactaccaaaaaggac cgtgtaacacactgcctgaccatttgtgaaaacattgttgcacagtctctgaggaactca ccagagtttcagaaactgctggggattgcaatggaaatgtttttattgtgctgtgacgat acagagtctgacgttagaatggtagctgatgaatgtttaaataaaattatcaaagccctg atggactcgaatctgccgaggttgcaattagagctctataaagaaatcaaaaagaatggc ccctctcgaagtcttcgtgctgcactttggaggtttgctgagctggctcaccttgttcgt ccacagaagtgcaggccttaccttgtgaacctacttccctgtctggctcggatcagcaaa cgtccagaagaagctgtgcaggagacgcttgccaattctgtgccgaagatcatggcagct ctgggcaactttgcaaacgacagtgaaattaaaatgttgttgaagacgtttattgggaac ctgaaatcgagttctccaactattcggagaactgcagccagttcagctgttgtcatctgt cagcattcaagaaggacccagtatttctacacttggctattgaatgtgcttttgggattt ttagtccccgtggaggaagatcggcctactccacttatcctaggagtaatgcttacactc aggtatctaatgcctttgctgagacaacaagtcaaggatactagtctgagaggcagcttt ggtgtgactcggaaggaagctgaaatctccccttctttggagcaacttatacaggcctat gaattaacattacactacacccagcacagggaccacaatgtggtaacagctgccctggaa atgttgcagcagctgtttcgtactcctcctcctgaactcctccaggctctaaccactcct ggcagcatcaccagagtcagcattgctcgagatgaaaccacaaaccggcttcgaagtggc agcattgtggaattaatagctggaggggggncttcttgcagtcctgttcttctcagaaag ccaaaaggaaaagtggtctgtggacaagaggaaggactggaagatgaagcagagacacgt tctgagatcagtggtgcttcttttccaggtggcacgacttttccaggttcagtgaacaac gaggaagctgctgaaattccatcatcttcaggcatttccaccataggttctacaagccca ttgccggattctgcagggcacgacatcatcacccagcaaccacgttcccaacatacttta caggcggcagaatctgtagatctgaatagttcaacggtgacatcagacttgaccaatgtt gcaaacgaaggggaggatgatgacattctgagccgcagctccagccagattagcaccatt cagtcagataccactatagatctgaatgaccagaccaatcagacaacgtctccgctaagt gagagctcccagaccacagagggccctgattcggctgtgaccccgtcagacagctctgaa cttgtaagtgtgcagcgggctgaggggggatcccagtcatctactgaggggcctgacatc tctcccagctcccccatggaaggcccagactccgatacttccactttctcctccagttca gctagtagcagtgaaaaggtacttgacgggacagacagtcagtattcagcaatgcagatt ggacagcttcaggatgaggaggaagatagcaccaatccaccaggagaggaactccaagat ggctttactacttcctctcttgcagtaaacaagccccacttgctaagtcacctgggtcac agccggcagtcgtcagacagcagtgttgaccgttttgtgtcaaaggatgactgcgttgag tcagcagatcttgaaattaagccttgcagaataaagggagacatcggacactatacagat gagaatgctgctcctctgattcactgtgtccgcctccttacagcatcgtttcttctgacc ggccagaaaaaaggtctcatccctgacagagaggtgagggtcagtgtgaaagcattggca gtgagttgtgttggagctgccattggacttcatcctgaagctttcttcagtaaactctac aggaccccacttgaggtttcagagacgcaagaagaacagtatgtatcagatatcatgaaa tatgttgagcatggagatccacagatcagaggtgcaactgcgctcctttgttcaacgttc atccattcagttcttaccaagacccggtttcatcctgacacttggttggccaacatacga agtactgcagggtataacgtctctttagaggactgtgtgcctttacttcagaaaactttg aaagataaatcatcggtgacatgtaaaatggcatgtgctgctgtcaggcactgcatcaca agtttatgcaacagcagctacagtgagctaggattgcagctcatcattgaccttctgacc ctgaagaataattcttactggcttgtgaggactgagctgttggaaacactggcagagatg gatttccgattagccggtttcttggagagaaaaacagtagaacttcacaagggtgatcat cactacactgggatgttaaagctacaggaacgtgctatcaatgatgtggttattaatttg ctgggtgatgaagatccaagagttcggcacgtagcagcaacgacattagtaaggcttgtc cctcgattgttttttgactgtgatcaaggacagtctgatccagtggtagcaatagccaga gaccaaagcagtgcatatctgcaactgctgatgcatgagacccaatctccatctcacttt gcagtcagcactattaccagaacatacagaggattcaacatttcacagagtaccactgat gtaacaatagaaaataatctctcccgcatcattactgctgtgtctcatgcattaacgtca tctacctcacgtgcccttatacttggttgttgtgaggtcttgtgcctgctttcattgaac taccctgtgtgtaattggagcattggctggcattgtggatatacggcaactagttcacaa gcctccagagtccatctctacaaaaacaggggacggtcattcagcgtatcacaaaacagt ccaacagatgactctcgaaagggctgtactgtgggaatggtcaatatgatactttctctg ctttcatcagcctggtttcctttggacctttcttcccatcaagatgccttaatattatct ggaaatttactgtctgccatcgcaccaaaatctttgaagaatccctggggcactgaagat gataccggtgtgtccaacaagcaggaggagccatggcctgctttggctgacaggaccctg gtaggcatggtggaacagctcttctcccatttgatgaaggtcataaatatctgtgcgcat gtgattgatgatgttgcacctggcccagctctcaaggcaactctgccttcacttgcgaac accccatccctcagcccaatcaggcgcaaaggaaaagagagagagtcagtggagcagaca actgcaccaatgagtccaaagaagataactgaatccaatcaagctgcccggcctacagat accgttggagctgcgccaacaagcaagtccacctccgtgggtagtttttaccaccttccc ccatatctgaaattacatgatgtcttgaaggctacctatgcaaactataaggttaccttg gaccttcaaaacagtaatgaaaaatttgggaactttctacgtgccgctttggatgttcta tctcagcttttagagattgcaacccttcctgacattgggaagtgcgtggaagaaatcctt ggctacctaaagtcctgttttagcagagagcctatggcagtcataatttgcgtacagcag ctattgaagactctttttggaacaaacctagcatctcagtatgacagctgctcatccaac cccagtaaatctcaaggcaaggtgcagcgtcttggctcctctaacctgagaccgggactg tatcactactgcttcatggcgccctacactcatttcactcaggcacttgctgatgctagt ctgaggaacatggtccaagctgagcctgaacaagacacatcagggtggtttgatgtgcta cagaaggtttcaacgcagctgaaatgcaatatgacaaatgtcacgagacatcgagctgac aagaatatgatacacaactatatccggctcttcgaaccactggttattaaggctttaaag cagtacacaacaaccacctcagtatttctgcagagacaagtgcttgacctgttggcccaa cttgtgcagctcagagtgaactactgtctacttgattcggaccaggtgttcattgggttt gttctgaagcagtttgaatacatagaggttggccagttcagggagtcggagatgatcatt cccaacatttttttcttcttggtgttgctgtcatacgaacgctatcattccaagccgatt attggaattcccaaaattattcagctgtgtgatggaatcatggccagtggccggaaagct gtaacacatgcaatcccagcactacaacctatagtccatgatctgtttgttctacgagga acaaataaagctgatgcaggcaaggagctggacacacagaaggaagtggtggtttctatg ttgttgagactcatccagtaccaccaggtgttagagatgttgatactggtgctccaacag tgccacaaagagaatgaggataagtggaaacgcctttcacgtcagatagctgatatgata ctaccattgcttgctaaacaacagatgtaccttgattcacatgaagctttgggagtatta aatactctattcgagacggtggcgccatcttccctgcgaccagttgacatgttgctgaag agcatgtttgttatgcctgcgactctgatctcagtgggaacagttcagctttggatttca ggcattcttgccatcctgcgagtgctgatctctcagtccactgaggatattgtcctgtcc cgagtccaagagctttccttgtccccgtattttatttcctctcagaatatcaataggttg agagaaagaggaaaccaggtgtcaccagcagaggagcagaatgaagaaacgttgagtaaa cattcaccagaagaaatctttgcgaggtttctgttacaactggtggggattctcttagaa gatattgtgaacaaacagctaaaggttgacatgagtgaacagcagcattcattttactgt cagcagcttggcactttgctgatgggtctgatacatatcttcaagtcagggacgtttaga agaattactgcagctgccaccaagttaatcaaaggggatggttctgatggtaacttctcg acattggacagcttgaatatcctggttcagtccattattcctactcatccttctctggtg ctgctttggtgccaaatcctgttgcttatgaactacacaaactacaagtggtggtcagaa gtgcaccaaacccccaagagacacagcttgtccagcacaaagttgctaggtcctcagata tctgaggaaaatgaagaaacaaaatctgcatctaaattgggcatgtgcaatcgagaaata gttagaagaggagcccttattcttttctgtgattatgtgtgtcaaaatcttcatgattca gaacacctgacctggctgatagtcaaccatgttcaagacctcatcaatctttcccacgaa cctccagtgcaagattttattagcgctattcatcgaaactctgctgccagtggtcttttc attcaagccattcagtctcgatgtgacaatcttacaaccccaaccatgctgaagaagact ctgcagtgtttagaaggaatccatctcagccagtcaggagctgtcctaatgctctatgtg gataaactaatcagaacacctttccgagtattggcacgaatggtggatactcttgcttgc cggcgagtcgagatgcttttggcagagaacttgcagaacagtgttgttcaagtgccacgt gaagagctggaaaggatacagcgatatctgcagaacacatgtctggctcagagacaccaa agattgtattccctgctggacaggttccgtacaacaattgcaacagacacagtcagccca tcgccaatagtgacctctcacccactggatggggacaagctttctgctgtggaatctata gttgtggacaaagaatggtacgtagcgcttgtaaaatcccagtgctgcaatcgtgtgact acaacactaatggagtgcacagaactactcagcaagcttcctgaagctgatctccacacc atcataacagttaaggaattcagtttgaatcttctgactccttgtttggctttgggtttg caagaaatttctatggagaaaagcagtatcttgtttgaaactgccaggaaaattacctta gatcacatgactgttcgtgtacaacgtcttcccagcagccatcaggtgttccaaatggtg catccatggcagaattccttctactggaataaaattgatgaactttatggagatgttctc ttctatcaaactgtccttcgtctgtgcagtgcagtggctcagtaccttctgtctcttccc aaattacctgcagctcttcagattcctactgacaaagaggcagacattgcaaaatttgtt gtcttgtccctggaggcggtgagctggcagctgatgcatgatcaagttccactgagcctg gatttacaagccactttggattgttgctgcttggccttgcagcagcctgctatttggaac ttattggcatctgcagcatatgtaacgcaagcctgttcagttatcaactgtataaggttc atcatagaagcggtggcagttgaaccaggtgatgagcttcttcatctcgaggacaagagg aaatcaaaaaatagaaatgaagatgaagaggctacaaatgtatctgagagggccaagtac attgcaacagcttgtgaagtaatggctgaaatggtggagtgtcttcagtctgtactattc tttggacaccccagcaataatcgaataccagcgttcttaactcctcccctcagaaatatt agtatcaatctggccagactgcctctggttaacagctacacccatgctcctcctttggtc tggaaattggggtggtcgccaagcccgggtggtgaatttggtacagttctccctgaaata ccagtggagttccttcaggagaaagaagtttttaaggaattcatttatcggataaatgtc cttggatggaccagccgaactcactttgaggaaacctgggcaactctgcttggtgtgctc gtgacccagccgttagcgatggatcaggaagaggaggttccacaagaggaggacactgag aggacccagattaatattcttgcggtgcaagcaataacatccttggtgctaagtgccatg gcaattccagcagcagggaatccagccactagctgccttgaacaccagcctcgtaataaa actttgaagtctctcgatacaaggtttggaagaaaattgactcttatccggggaattgtg gaacaggaaatccaagcaatggtatcaaagagggacaacatagcatcccactatccgtac caagcatgggaccctgtgccatctctatctgcttcgacaactggtgccctgataagccat gaaaagcttttactacagataaataccgagcgggaaatggggaacatgaattataaactg ggacaggtatccattcattctatctggctgggaaacaacatcaccccattgagagaagaa gagtgggatgaagatgaggaagatgaaactgatgtgcctgttccatcctctcctccaact tcgccaattaattcaaggaagcatcgggctggggttgacattcattcctgttcccagttc ttactggaactctactctcagtggatacttcccactaacactggcaagaaaacccctgtt gtcctgatcagcgaggtggtaagatcgcttctggcagtttcggatttgtttactgaaaga aaccagtttgaaatgatgtacagcactctgacagaactgcagaaactgcatccggcagag gatgaaattcttaatcagtatttagtgcctgcagtctgtaaggcagcagccgttctgggc atggataaggctattgcagagcctataagtcgtctgttggagaccacattgcgaagtact catatgccttctcggataggagcactgcatggaattctttacattctggaatgtgatcta ttggatgatacagcaaaacagctcattccaatcatcagtgattacctgctgtccaacctg cgtggaatagcacattgtgttaacatccacaatcaacagcatgtattagtgatgtgtgca acagccttttacctgatagaaaactacccactcgacgtgggacctgaattcactgcaggc atcattcagatgtgtggtgtaatgatctctgggagtgaagaatctactccttctataatc tatcattgtgtgctgcgtgggatggaacgtcttctgctgtcagaacaactttcgcgtttg gatggagaggcgctggtaaaactcagtgtagatagactgaatatgcacagtcctcacaga gcaatggctgcattgggattgatgctaacctgcatgtatacaggcaaagagaagggcagc cctggacggattacagaaaccgactccacagctcccgacagtgaatctgtcatcgtggct atggaacgggtatcagtcctgtttgacagaattaggaaagggtttccttgtgaggcacga gttgtggcacggatcctcccacagttccttgatgacttcttcccaccccaggatgtgatg aacaaggttattggtgaatttatttccagccagcaaccttacccacagttgatggctgcc gttgtttacaaggtgtttcaaacacttcacaatactggacaatcttccatggtgagggac tgggtaatgttgtcactctcaaatttcactcagagaacgccggtagcgatggcaatgtgg agcctctcctgtttctttgtcagtgcttctaccagcacatggatctcagccctccttccc catattgtcagccgaatgggtaaatcggaccagattgatgtaaacttgttctgcctatta gccatggatttttacaggaaacagattgaagaggagctggatcgccgggccttccagtca gtctttgaggtggtggcaacccccggaagtccatatcatcaactcttgacttgtttgcga agcttccatcaggttgcagagttgtga

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