Callorhinchus milii (elephant shark): 103186540
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Entry
103186540 CDS
T03088
Symbol
lsm1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103186540 (lsm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmk03019
]
103186540 (lsm1)
Messenger RNA biogenesis [BR:
cmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103186540 (lsm1)
mRNA degradation factors
5'-3' decay
Lsm complex
103186540 (lsm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF5528
Motif
Other DBs
NCBI-GeneID:
103186540
NCBI-ProteinID:
NP_001279417
UniProt:
K4FYL2
LinkDB
All DBs
AA seq
133 aa
AA seq
DB search
MNYMPGTASLIEDIDKKHLVVLRDGRTLIGYLRSVDQFANLVLHQTVEGIHVGRKYGDIP
RGIFVVRGENVVLLGEIDLERETDTPLQRVSIEEILEAQRVQQQERQEAEKTKSKALKER
GLSIPRTDALDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactacatgcccggcaccgccagcctgatagaggatatagacaaaaaacacttagta
gtacttcgggatggaagaacattaataggatacttgaggagcgtagatcaatttgctaat
ttggttctgcaccagacagtggagggaatccacgttggaaggaaatatggcgacattcca
cgtgggatctttgttgtccggggagaaaatgtggtgcttctcggggagatagatctagag
cgggaaacggacacacctttgcaaagagtgtctattgaagagattctggaagcccaaaga
gttcagcaacaagagaggcaagaagcagaaaagacaaaaagcaaagctttaaaagaacga
ggattgtccatccctcgtacagacgctcttgacgaatattaa
DBGET
integrated database retrieval system
