Callorhinchus milii (elephant shark): 103186563
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Entry
103186563 CDS
T03088
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103186563 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmk03019
]
103186563 (exosc1)
Messenger RNA biogenesis [BR:
cmk03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
103186563 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
103186563 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Pollen_Ole_e_1
Motif
Other DBs
NCBI-GeneID:
103186563
NCBI-ProteinID:
XP_007903861
LinkDB
All DBs
Position
Unknown
AA seq
194 aa
AA seq
DB search
MAPLKLCIPGERLCSIEDGTPTSGTYSRHGYIFASLAGYVVKKNDNGPVPAISVVRDTEA
QLLPEVGVVVTCKVTSINPRFAKVSILYVGSTPLKGAFRGTIRREDIRATEKDKLEIYKC
FRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSEAGAQMVPISWCEMQCPRTHGKE
FRKVARVQPEFLQT
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgctcaagctctgcattcccggggagaggttgtgtagtatagaggacggcact
ccgaccagcggcacctactccaggcacggctacatcttcgcctctctggccggctatgta
gtgaagaagaacgacaatggcccggtaccggcgatctcagttgtgcgggacacagaggct
cagctcctcccggaggttggagtggtggtcacgtgtaaggtgaccagcatcaacccccgg
tttgcgaaggtttccattctgtacgtggggtccactccgctgaagggggctttcagagga
accataaggagagaagacattcgagccacggagaaagacaagcttgaaatctacaagtgt
ttccgacctggggacatcgtgctggccaaagtgatctcactgggcgacgctcagtctaac
tacctgctgacgacggcggaaaatgagctgggggtggtggtggcccacagtgaggcgggt
gctcagatggtgccgatcagctggtgtgagatgcagtgcccacggacacacggcaaggag
ttccgcaaagtcgctcgagtccagcccgagttcctgcagacgtga
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integrated database retrieval system