Callorhinchus milii (elephant shark): 103186662 Help Entry 103186662         CDS       T03088                                  Symbol sf3b3 Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism cmk  Callorhinchus milii (elephant shark) Pathway cmk03040   Spliceosome Brite KEGG Orthology (KO) [BR:cmk00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     103186662 (sf3b3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cmk03021]     103186662 (sf3b3)    03041 Spliceosome [BR:cmk03041]     103186662 (sf3b3)    03036 Chromosome and associated proteins [BR:cmk03036]     103186662 (sf3b3) Transcription machinery [BR:cmk03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      103186662 (sf3b3) Spliceosome [BR:cmk03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     103186662 (sf3b3)  Complex B     103186662 (sf3b3)  Complex C    U2 SnRNP specific factors     103186662 (sf3b3) Chromosome and associated proteins [BR:cmk03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      103186662 (sf3b3)     TFTC complex      103186662 (sf3b3) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Motif Other DBs NCBI-GeneID:  103186662 NCBI-ProteinID:  XP_007904025 UniProt:  A0A4W3IVD0 LinkDB All DBs Position Unknown AA seq 1217 aa AA seqDB search MFLYNLTLQRATGISHAIHGNFSGTKMQEIVVSRGKILELLRPDANTGKVHTLLTVEVFG IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNIFDKVHQETFGKSGCRRIVPGQY LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP MFACLEMDYEEADSDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVSTAMCVLKTGFLFVASEFGNHYLYQ IAHLGDDDDEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILTCQIADLANEDT PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEYDAYIIVSFVN ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGAEKQDELGEKGSI GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVSFP LQFTPRKFVIHPESNNIIVIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA AFLNENLPESIFGAPKAGSGQWASVVRVMNPIQGNVYDQIQLEQNEAAFSVAVCKFANGS DDWYVLVGVGKDLILNPRSVGGGYIYTYKLINSGEKLEFVHKTSIEEVPTAIAPFQGRVL VGLGKLLRIYDLGKKKLLRKCENKHIPNYIVAIHTIGHRVVVSDVQESFFWIRYKRNENQ LIIFADDTLPRWITTASLLDYETMAGADKFGNISVVRLPPNTSDDVDEDPTGNKALWDRG LLNGASQKAEVIVNYHVGESVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF FQHLEMHMRSEHPPLCGRDHLSFRCYYFPVKNVIDGDLCEQFNSMDPIKQKSVAEELDRT PAEVSKKLEDIRTRYAF NT seq 3654 nt NT seq  +upstreamnt  +downstreamnt atgtttttgtataacctgacccttcagagggcaactggcatatcccatgccatccatgga aacttttcaggaaccaaaatgcaggagattgttgtttcccgggggaagatcctcgaatta ctccgtccagatgcaaacacagggaaagtacatactctgcttacagtggaagtttttggg ataattcgttctttaatggccttcaggctaacgggaggtactaaagattacattgtagtg ggcagtgattcgggcagaattgttatcctggagtaccaaccatccaagaatatctttgac aaagttcaccaggaaacctttggcaagagtggttgtcggcgtatcgtacctggccagtac ctggcagtggaccccaaaggtcgtgctgtcatgataggtgccattgagaaacagaagctg gtgtacattctgaacagagatgctgctgcccggctgaccatctcctcgccccttgaagca cacaaggcaaacacactcgtgtaccatgtggtgggtgtggatgtgggctttgaaaaccct atgtttgcctgccttgagatggactatgaggaggcagatagcgaccccacaggtgaggca gcagctaacacgcagcagaccttgacgttctatgagttagacttgggcctgaaccacgta gtgaggaagtacagtgaacctctggaggagcacggcaactttctgattacagttccaggg ggctctgatggcccgagcggtgtgctcatctgctctgaaaactacatcacgtataagaac tttggtgatcaacctgatattcgatgtcccatcccaaggagacggaatgacctggacgat cccgaacgaggaatgatctttgtctgctcggcgacacataaaaccaagtccatgttcttc ttcttggcacagactgaacagggcgacatctttaaaatcaccctggaaacagacgaggat atggtaactgagatcagactgaagtattttgatacagttcctgtatctaccgcgatgtgc gtgttgaagactggattcctgtttgtagcttctgaatttggcaatcactacctttatcag attgcacatctgggagatgatgatgatgagcctgagttctcctcagctatgcctctggag gagggggacacctttttcttccagccacgacctctcaaaaacctggtactagttgatgag ctggacagcctttcacctattctgacttgccagattgctgacttggccaatgaagacaca ccccagttgtacgtggcctgtggtcggggcccacggtcatccctgagagtcttgagacat ggtcttgaggtttccgaaatggccgtctctgagcttcctggtaaccctaatgcagtatgg actgtaagaagacatgtggaagatgagtacgatgcatacatcattgtatctttcgtgaat gccacactggtactgtctatcggtgagactgtagaggaagtgacagactctggatttctg ggtaccacacccacactctcctgttccttgcttggtgaagatgcactggtgcaggtgtac ccggatggtatccgtcacatccgtgcagacaagagagtgaatgagtggaaaaccccgggt aaaaagaccattgtgaaatgtgcagtgaaccagcgtcaggttgtgattgctctgacaggt ggggagctggtctactttgagatggacccgtctggccagctgaacgagtacactgagcgg aaggagatgtcagcagatgtggtgtgcatgagtttagcaaacgtacctccaggagagcag cgctctcggtttctggctgtgggtcttgtagacaacaccgtcaggattatttctcttgac ccttcggactgtctgcaacccctgagtatgcaggctcttccagcacagccagagtcgctc tgtatagttgagatgggtggtgcagaaaaacaggacgagctgggagagaagggctccatt ggcttcttgtacttaaatataggtttacagaacggtgtgttactgaggactgtgctggat ccagtgactggcgatctgtctgacaccagaaccagatatttggggtctcgaccggtcaag ctcttcagggtcaggatgcagggtcaggaagcggtgttggctatgtccagccgctcatgg ctcagttactcgtatcaatctcgtttccatctgacaccactgtcctatgaaactctggag tatgcatcgggttttgcttcagagcagtgtccagagggtattgtggccatctccaccaac accttgagaatcttggctcttgagaagttgggagcagtcttcaaccaggtttccttccct ctgcagttcactcccagaaagtttgtcattcacccagagagcaacaatatcattgttatt gagactgaccacaatgcttacacagaggccaccaaagcccaacgcaaacagcaaatggct gaggaaatggtggaagcagctggagaggatgagcgagagcttgcagcagagatggctgcg gcctttttgaatgagaatctgcctgaatctatttttggagcccccaaggcaggaagtggt cagtgggcatctgtggtccgagtaatgaaccccatccagggtaacgtgtatgatcaaatc cagttggaacagaatgaagcagcctttagtgttgctgtctgtaagtttgcaaacggaagt gatgattggtatgtgctggttggagttggcaaagacttgatcctcaatccccgctcggtt ggcggtggatacatttatacctacaaactcatcaacagcggggagaagctggaatttgta cacaagacctccattgaggaggttcccacagccattgcacctttccagggccgagttctg gtgggcttgggtaaacttctgcgcatctacgatctaggaaagaagaagcttctaagaaaa tgtgaaaataagcacattccaaattacattgtggctattcacaccattgggcaccgagtg gttgtctcagacgtacaagaaagcttcttctggatccgttacaaacggaacgagaaccag ctgatcatctttgccgatgacacgctgccgcgctggatcaccacagccagcctgctggat tacgagaccatggccggcgccgataaatttggaaacatcagcgtggtgaggttgccacca aacaccagtgatgatgttgatgaggatcctacagggaacaaagccttgtgggacagaggt ctgcttaatggagcttcacaaaaggccgaggtcattgttaattaccatgtgggtgagtcg gtgctctcactgcagaagacgacactaatccctggtggctctgaatctctggtgtataca acactgtccgggggcatcgggatcctggtcccattcacatcacacgaggaccacgacttc ttccaacatctggagatgcacatgagatcagagcatcctcctctctgcggtcgagaccac cttagtttccgctgctactacttccccgtcaagaatgtaattgacggcgatctttgtgaa cagttcaactccatggatcccatcaaacagaagagtgtggcggaggagctggacagaacc ccagctgaggtgtccaaaaaactggaagatatccgaacacgctatgcattctaa

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