Callorhinchus milii (elephant shark): 103186681
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Entry
103186681 CDS
T03088
Symbol
trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmk03019
]
103186681 (trim71)
04121 Ubiquitin system [BR:
cmk04121
]
103186681 (trim71)
Enzymes [BR:
cmk01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103186681 (trim71)
Messenger RNA biogenesis [BR:
cmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103186681 (trim71)
Ubiquitin system [BR:
cmk04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
103186681 (trim71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
DUF5711
PspA_IM30
Invasin_D3
TXNDC16_N
Ribosomal_bL9m_C
Motif
Other DBs
NCBI-GeneID:
103186681
NCBI-ProteinID:
XP_007904051
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MDCAEYLCDHCVRAHQRVRLTKEHVIHRFRQQHYNQQPFPGLTLPHERVSYCQQHENEVM
RLYCDTCAVPICRECTMSRHVGHSFVYLQDAVQDSKEITLQLLADAQQGRQAIQLSIEKV
RAMVEQVEMKAQVIRSEVKAVTSRHKKALEERECDLLRKVEKIRQMKAKTLHLQVEALRE
NLTKLENTIDCVQKALLDGRDVDVLLAKEQMFVQIQDLKKLRNLLQPHDDDTLSFVPPDG
VLCKAIKSLGIICSSAYAPVSTAAGEGLKRALRGKMSSFTVLTKDHTGEGRSSGGDLVVV
VVMGPDGCLFRADVLDHHDGTYTVSYSPHLEGEHIISVTIRGQHIENSPFRVMVKAGRSY
AGIGLPICSFGGEGDEDGQLCRPWGVCVNKDGYIIIADRSNNRIQVFTPSGTFHHKFGSA
GARSGQFDRPAGVACDQSCRIVVADKDNHRIQVFTFEGQFILKFGEKGSKNGQFNYPWDV
AVNSEGRILVSDTRNHRVQLFGPDGNFVSKYGFEGALWKHFDSPRGVAFNHEGHLVVTDF
NNHRLLVIHPDFQSARFLGSEGTSNGQFLRPQGVAIDQEGRIIVADSRNHRIQIFEPNGN
FLCKFGTQGSGFGQMDRPSGIALMPDGLIVVVDFGNNRILLF
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggactgcgccgagtacctgtgcgaccactgcgtgagggcgcaccagcgggtccgcctg
accaaggagcatgtcatccaccgcttcaggcagcaacactacaaccagcagcccttcccc
ggcctgacgctgccccacgagcgggtcagctactgccagcagcacgagaacgaagtgatg
cgtttgtactgtgatacctgcgcagtcccaatttgtcgagaatgcacaatgagccgtcat
gttgggcacagttttgtctacctccaggatgccgtacaggactccaaagaaattaccctt
cagttgctagcagacgctcagcaaggtcgacaggctattcagctcagtatagaaaaagtc
agggccatggtggaacaagtcgagatgaaagctcaagtgattcgatccgaagtcaaggca
gtaacctcgcgacataagaaggctctcgaggaacgcgagtgtgacttactaagaaaggtg
gagaagatccggcagatgaaggccaagacgctacacctccaggtggaagcgctgcgtgag
aatttaacaaagctggagaacactatagactgtgttcagaaagcactgttggatgggcgg
gatgtggatgtcctgctagcaaaggaacaaatgtttgtccaaatccaggacttgaaaaag
ctgagaaatctccttcagccccatgacgatgacacgctttccttcgttccgcccgatggt
gtgctctgtaaagccataaagtcgctagggatcatctgcagcagtgcatacgcgccagtc
tcaacagctgctggtgaggggttgaaacgggcattgcgtgggaaaatgagcagcttcact
gtgttgaccaaagatcacactggtgaaggacggtcatctggtggcgatttggttgtagta
gttgtcatgggacctgatggctgcctctttcgcgctgatgtattagatcaccatgatggc
acctacacagtcagctattcgccacacctcgaaggcgagcacatcatctcagtcaccatt
cgtggccagcacattgagaacagcccctttcgagtcatggtcaaagcaggtcgcagctac
gctggtattgggcttcccatttgttcgtttggtggggaaggggatgaagatggacagctc
tgcagaccttggggcgtttgcgtcaacaaagatggctacatcatcattgccgatcgaagc
aacaaccgcatccaagtgttcacgccaagtgggaccttccaccacaagtttgggtcagcg
ggcgcccgttccggccagtttgaccgccctgctggagtcgcctgcgatcagagttgtcga
attgtcgtggctgacaaggacaaccatcgtattcaggttttcacctttgagggacagttt
attctaaagtttggggaaaaaggaagcaagaatgggcaattcaattatccctgggatgtt
gcagtcaattctgaaggaagaatccttgtgtccgacacacgtaatcaccgagttcagctg
ttcggtccagatggaaacttcgtaagtaaatatggctttgagggagcattgtggaagcac
ttcgattctccccgtggggtggcttttaatcatgaaggacaccttgtggtcaccgatttc
aacaaccaccggttgcttgtgatccatcctgacttccagtcggcacgtttccttggctcc
gaaggcacaagcaacgggcagttcctccgacctcagggtgtggccattgaccaagaaggg
cgtatcatcgtggctgactccaggaaccaccgcatccaaatattcgaaccaaacggtaac
ttcctgtgcaagtttgggacccaaggcagcggctttggccagatggatcgtccgtccgga
attgctctcatgccagatggactgatagtagttgtcgactttggcaacaatcgtatcctc
ttgttttaa
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