Callorhinchus milii (elephant shark): 103186716
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Entry
103186716 CDS
T03088
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103186716 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmk01009
]
103186716 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmk04131
]
103186716 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
cmk03029
]
103186716 (rb1cc1)
Protein phosphatases and associated proteins [BR:
cmk01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103186716 (rb1cc1)
Membrane trafficking [BR:
cmk04131
]
Autophagy
Autophagosome formation proteins
ULK complex
103186716 (rb1cc1)
Mitochondrial biogenesis [BR:
cmk03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
103186716 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
103186716
NCBI-ProteinID:
XP_007904102
UniProt:
V9K830
LinkDB
All DBs
Position
Unknown
AA seq
1589 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQTVADLKHAIQAKYKIATQHQVLVVNGGECMVADRRVC
NYSAGTDTNPIFLYNKEMILCDRAPTIPKTTFSAENEMGLKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCAFCERLVHDEHLQHQGWAAIMANLEDCTYSFQKLLTKFEHAYNHYEH
SVEDIKLKLTSLGTAVSVMAKIPLLECLTRHSYRECQERLRLPGEETEAERFNSSLLYEA
KSIVGKKSPSSTLTSYGHPEQDNVFQQSGEDKDVNEEKTPNAAGDEFNVGDQVFFNVSLL
DWINVQDRPNDVESLVRKCFDSMNRLDPGILQPFLLECHETIAKLDNQNMKAIKGLEDRL
YALDQMIASCNRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHANQLMIMLTNHKK
LVDIKQKCTTAKQELANNLQVRLKWCCYVMLHADQNGEKLQALLRLLTELQERVRVVEAL
STVPQMYCLAVVEVVRRKMFTKHYREWASALVKEGKQLYEAERTKRESFGKLFRRSFLRN
RLFKGLDSWPASSFCTRKPRKFDFELPDISLSDLQFLQTCCPPEVQPFLRVPTLCDFEPL
NQHIQVLRNLVKAAQSLDEMSQTITDLLTEQKASLDQAELKGATTQRSESTTGTKTTSSR
ASSTLSLQGPICPPANVPASLEELSPDSIDAHTFDFETIAHPNLEQALKQESIDMDSLAE
SPESDFMSAVNEFVIEENLASPNVISDPQSPEMMVESLYSSVINAIDNRRMQDTAVGEKE
DSKEVASLKVYIEKYRFIAEMSQSHFISIKEDLSHFRSLVQEEQYDFNTSMKNVTQELRH
IIETVKCRVETETKENYQRILETLRKDYDDRIDKGKAETEANRQNVEKLRRDLMELENAI
KQKDEEINVMKAEHEILLRLQTDKDKEMLSLAEAKKAQESQIQELGQSKADLLEEFNQFK
VQSDQKSEQLKTELQNLEQSHLKDLEESLQARYEQEIEKLTADHRSQEEQMLRKNEVQLE
QTKESFTLKVHEKEQELNELKMKVSELSDLRCKLEVEMALKEAETEEIRQLFEENQSQQQ
ETIKCQVMKEVESYTKEINGLKRQQQVQTEEYKVGLAEQRTLMTLEKNQCVSELVDRQDE
EMTLLRAELIKLDTIRQQALNVEAGLKEQIGELNNTLEERLKTIEKQREEMISEKERALC
EIESKYQTIVRGLQEDKEQLLHSLQQDKETVRTVMHSTSEECVQKSHEEELQTKFQQLES
HLEEQSSVDREVLSAAPISRSPSSLIADLTGKFEEEKASLLEQLEKRNEELQNLKTSLIA
EQQTNFNTVLTREKMKKEQIINELSEQLKKLTQQQEKDRVLIESLSADRATLLQEKKKLD
EELNRLRSNALVSSTIFSSPGPSGIEAAASTTDLLFDPERLASVATIMEEGKIDSAMEAS
TMALRETIHMSEEKHRIMVLERTLQMKEEENKRLNQRLMSQSMSSVSSRHSDKIAIRDFQ
VGDLVLIILDERHDNYVLFTVGPTLYFLHSESLGALDLKPVPGSSRRPWVLGKVMEKEYC
QAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtatttctggtcaacactggaactacccttacattcgacactgaactt
gctgtacagactgttgcagatcttaagcatgccatccaagctaaatataagattgcgact
cagcatcaagtattggttgtcaatggaggggaatgcatggttgcagacaggcgtgtttgt
aactacagtgctggaacggatacaaatccaatctttctgtacaacaaagagatgatcttg
tgtgatcgtgcaccaactatacccaagacaacattttctgcagaaaatgagatggggctg
aaggtagaagagtctttaatgatgccagctgtctttcacacagtggcttctagaacccag
cttgctgtggagatgtatgaagttgcaaagaaactttgcgcgttctgtgaacgactggtc
catgatgaacatcttcagcatcaaggctgggctgccatcatggctaatttggaggactgc
acctattctttccaaaagttgttgacaaaatttgaacatgcatataaccattatgagcat
tctgtggaagatattaagctaaaactcacaagtctaggcacagcagtctctgtaatggcc
aagatcccacttttggagtgtttgacgagacacagctatcgggaatgccaggagagactg
agattacctggagaagagactgaagctgagaggttcaatagctcattactgtatgaagct
aaatctatagttggtaaaaagtcaccctcttctactttgacatcatatggacatcctgag
caggataatgtttttcagcaatccggagaggacaaagacgttaatgaagaaaagactcca
aatgctgcaggagatgaatttaatgtgggtgatcaggttttctttaacgtctccttgctg
gattggattaatgtacaagatagaccaaatgatgtggaatcactggtcagaaaatgcttc
gactctatgaaccgactcgatccaggaattcttcagccatttctattggagtgtcacgaa
acaattgccaaacttgataatcagaacatgaaagcaattaagggacttgaagatcgactg
tacgctctggatcagatgatagccagttgcaataggctggtaaacgaacaaaaagaatta
gctcagggatttttagcaaatcagaagagagctgaaaatctgaaagatccatctgtcctt
cctgatttatgtctgagtcatgcaaatcagctaatgattatgttaacaaaccacaagaag
ctggtggatattaagcagaaatgtaccaccgctaagcaggaacttgcaaacaacttgcaa
gtcagattgaagtggtgttgttatgtgatgcttcatgcagaccagaatggtgaaaaacta
caagctttgctacgacttttgactgaactgcaagagcgagtacgggttgtagaggcactt
agcactgttcctcagatgtattgcctagcagttgtggaggttgtgaggcgtaaaatgttc
acaaaacattacagggagtgggccagtgctcttgtgaaagaagggaaacaactctatgag
gctgagagaacgaaaagggagtcttttggaaaattgttcagaaggtcttttctaaggaat
cgcttatttaagggactagactcttggccagcatcatcgttttgtacccgcaagcctcgg
aagtttgattttgagcttcctgacatatctttgtctgacctgcagtttctgcagacttgc
tgtcctccagaagtgcagcctttcctcagggttcctacgctgtgtgactttgagcctttg
aatcagcatattcaagttcttcgtaacctggtaaaagcagctcagagtttggatgagatg
tctcagactattacagacttgttgactgagcaaaaggcttctcttgatcaagcagagtta
aaaggagcaacaacgcaaaggtcagagagtacaactggaactaagactacctcttccaga
gcttcatccactctcagccttcagggacccatctgtccacctgcaaatgttcctgcctct
ttggaagagctgtcccctgatagtattgacgctcatacgtttgactttgagacaattgct
catccaaatttagaacaagctctgaaacaagaatccattgacatggactcattggcagag
agtccagagtctgattttatgtcagcagtgaatgaatttgtgattgaagaaaatctagct
tctcccaatgtgatcagtgatccacaaagccctgaaatgatggtggaatcattgtattcc
tcagttattaatgctatagataacaggcgtatgcaggatacagctgttggtgaaaaggag
gactctaaagaagttgcatctctaaaggtgtatatagaaaaatatagatttattgctgaa
atgtcacagtcacattttataagcattaaggaagacctcagccacttcagatcacttgtt
caggaagagcagtatgattttaatacttccatgaaaaatgtaactcaagaattaagacac
ataatagaaactgtaaaatgtagagttgaaaccgaaacaaaagaaaactatcaacgcatt
ttagaaactttaaggaaagattatgatgacagaatagacaaagggaaagcagagactgag
gccaatcggcaaaatgtagaaaagctcagaagagatttgatggagcttgaaaatgctata
aaacagaaagatgaggagatcaatgtgatgaaagctgagcatgaaatacttttgcgttta
caaactgataaagataaagaaatgctttccttggcagaagcaaagaaagcacaggaatct
caaatccaagaacttggtcaatccaaagcagatttattagaagaatttaaccaatttaag
gtacaaagtgatcagaagtcagagcaattgaaaacagaacttcagaatcttgaacaaagt
cacttgaaggatcttgaagagagcctgcaggccaggtacgagcaagaaatagagaagctg
acagctgatcaccgcagtcaggaagagcaaatgctgagaaaaaatgaagtacaattagag
cagacaaaagagtcctttacgttaaaggtccacgagaaggaacaagagcttaatgaactt
aagatgaaagtctctgagctttctgaccttaggtgcaaactcgaagttgaaatggcttta
aaagaagctgaaactgaggaaataaggcaacttttcgaagaaaaccaatcccaacaacag
gaaactataaagtgccaggtgatgaaagaagttgagagttacactaaagagatcaatggt
ttgaaacgccagcagcaggtacaaactgaagaatataaggtgggccttgcagaacaaagg
accttaatgaccttagaaaaaaatcagtgtgtctctgagttggtggacaggcaagatgaa
gagatgaccctgcttagagcagaactgattaagctggatacaataaggcagcaagcactt
aatgtggaagcaggattaaaagaacaaattggagagctcaacaatacgttagaagaacgt
ttgaaaacaatagaaaaacaaagggaggaaatgatttctgagaaagagagagctctttgt
gaaatagaatcaaaataccaaactattgttcgtggtcttcaggaagacaaggagcagcta
cttcactccttgcaacaagacaaagagactgttagaactgttatgcattcgacctctgag
gagtgtgtacaaaaatctcatgaggaagaattgcaaaccaaatttcaacaacttgaaagc
caccttgaagaacaaagtagtgttgacagggaagttttatctgctgcaccaatcagtagg
agtccatcaagtcttattgctgaccttacagggaagtttgaagaagagaaggccagctta
cttgaacagcttgaaaagcgaaatgaagagctccaaaaccttaaaacctccctgattgca
gaacagcagaccaacttcaacaccgttttaaccagagaaaaaatgaaaaaagaacaaatt
attaatgaactgagcgagcagctcaaaaagctaactcagcaacaagaaaaagatcgagtt
ttgatagaatcgctctctgcagacagagctactttgctgcaagaaaagaaaaagcttgat
gaagagctcaacaggctacggagtaatgcgctagtttcttctactatcttttcctcacct
ggaccttcgggaattgaggctgctgctagtacaactgatcttctatttgaccctgaaaga
cttgcttcagtagctaccataatggaagaaggaaaaatcgattctgcaatggaggcaagc
actatggctttacgtgaaaccattcacatgtctgaggagaaacataggattatggtttta
gaaaggacattacaaatgaaagaagaggagaataaacgtttaaatcaaagattgatgtct
cagagtatgtcatctgtgtcctccaggcattctgacaaaatagccattagagatttccaa
gttggggatttggtcctcattattctggatgaacgacatgataactatgttctatttact
gttggcccaaccctttacttcctgcattcagagtcattgggggcattggatcttaagcca
gttccaggttcctccaggagaccatgggtacttgggaaagtgatggaaaaggaatactgt
caggctaaaaaggctcaaaaccgatttaaagttcctttaggaacaaagttttacagagtg
aaggcagtaccctggaacaagaaagtataa
DBGET
integrated database retrieval system
