Callorhinchus milii (elephant shark): 103186859
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Entry
103186859 CDS
T03088
Symbol
cpsf4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103186859 (cpsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmk03021
]
103186859 (cpsf4)
03019 Messenger RNA biogenesis [BR:
cmk03019
]
103186859 (cpsf4)
Transcription machinery [BR:
cmk03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103186859 (cpsf4)
Messenger RNA biogenesis [BR:
cmk03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103186859 (cpsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_3
Torus
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-C3H1
zf-CCHC_3
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
103186859
NCBI-ProteinID:
XP_042197193
UniProt:
V9KQY4
LinkDB
All DBs
Position
Unknown
AA seq
270 aa
AA seq
DB search
MQELISNVDHIKFELEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLRASCGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMHPRFELPMGTGVDQP
PIQQQQQIQQKQNMGPCLQRMSSLVHIPSMNPGMGLQKLSMQSGYQPSQFQPSSNRGPRP
LEQVTCYKCGEKGHYANRCTKGHLAFLSGQ
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaacttatctccaatgtggaccacatcaaattcgagctggagatcgcggtggag
cagcagctcggggctcagccgctgcccttccccgggatggacaagtccggagcagcggtc
tgtgaattcttcctcagagcatcttgcgggaaaggtgggatgtgcccgtttcggcacatc
agtggggaaaagacggtggtgtgcaagcactggctacgagggttgtgcaagaaaggagat
cagtgtgaattcttgcacgaatatgatatgaccaagatgcccgaatgctatttctactcc
aagttcggagaatgtagtaacaaggaatgtccgttcctacacatcgatcctgaatccaaa
atcaaagactgcccctggtatgaccgaggcttctgtaaacacggtcccctctgcaggcac
cgacacacacgacgagtcatctgtgtaaactatctggtaggattctgcccggagggaccc
agctgtaaattcatgcaccctcggtttgagttgcctatgggtactggtgttgaccagcca
ccaatacaacagcagcagcagattcaacagaagcagaacatgggtccatgtctgcagagg
atgtcctctctggtgcatatccccagtatgaaccctggcatgggcttgcagaagctatcc
atgcaatctgggtatcaaccatcgcagtttcagccttcgtcaaatcgtgggcccaggcct
ctggagcaagttacgtgttataagtgtggtgaaaagggacattacgctaaccggtgcaca
aaaggacacttggcgtttcttagtggtcagtaa
DBGET
integrated database retrieval system
