Callorhinchus milii (elephant shark): 103187106
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Entry
103187106 CDS
T03088
Symbol
cacna1ha
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04010
MAPK signaling pathway
cmk04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103187106 (cacna1ha)
04020 Calcium signaling pathway
103187106 (cacna1ha)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cmk04040
]
103187106 (cacna1ha)
Ion channels [BR:
cmk04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
103187106 (cacna1ha)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
103187106
NCBI-ProteinID:
XP_042196907
LinkDB
All DBs
Position
Unknown
AA seq
2339 aa
AA seq
DB search
MLVILLNCVTLGMFQPCEDVACRSDRCTILKAFDDFIFAFFAVEMVIKMIALGIYGQKCY
LGDTWNRLDFFIVMAGMLEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFXEGNFAMYYNVSLPLYYHAHGDESP
FICSLPQDNGMQKCLELPNFKENGAKCFLSLDPYNHLTYNSEVSNRSGCINWNQYYNVCN
TGNVNPHKGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSF
FMINLCLVVIATQFSETKQRENQLMQEQRARFLSNDSTIASFSEPGSCYEELIKYICHLL
RKVKRRILRLYNSWQNKQRKKVDPNSTNDQGKRWRNKGRVRSIHHLIHHHHHHHHHHYHI
SNGSSRAQRDSPELCDMEMKSLRASSKLMLPSPALNHQTPSPGAESVHSIYHADCHFEGP
QMTCKSSTAANVKLMAGLTHHGDMNYPTIVSSVTSRSSSIPKSKGNKSSNAPLTVGKISS
NLSMLDPYGKLHHFVGEHGVCRSASKLSGLSMPCSALSTQAGIMACELQSCPYCAKVLEN
PELEITDSESCDSDADGIYEFTQDVQRTDQRDRKHKNKKAPKEKNKCTLFLLLFSEKTKR
IVESKYFNRGIMIAILINTLSMGIEHHHQPEELTNALEISNIVFTSMFAMEMILKLLAFG
LFDYIKNPYNIFDGIIVIISVWEIIGQNDGGLSVLRTFRLLRVLKLVRFLPALRRQLVVL
MKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLTTENGDTIPDRKNFDSLLWAIVTVF
QILTQEDWNVVLYNGMASTSPWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSD
TDEDKTSANFDYESERLKEPSTELKMYSVVMTPNGHLDSRSSIAPPIILRTAATPMPIPK
SSLYMDSVHTYVESRRGSSASIDPINYDQRSLSSVRSSPSAPWSTNSNWGSRRSSWHSLG
RAPSLKRKNQLGERESLLSGEGHQSSDDDGESEDAKSSKMGSVSGWSLHHRAESVDTKGS
LDFPELLQVPVMRHPVTMNPMSMTPPDYHDCNGKTLHVPNDVFLRMDQHKEDPSDYEDEM
DESYCFRIQTFLEPYKPNWCKAHEDWALYLFSPQNRFRIICQKVIAHKMFDHVVLVFIFL
NCITIALERPEIDPRSTERLFLSVSNHIFTAIFVAEMTVKVVAQGFFSGESAYLQSSWNI
LDGILVFVSVIDIVVSMASAGGAKILGILRVLRLLRTLRPLRVISRAPGLKLVVETLISS
LRPIGNIVLICCAFFIIFGILGVQLFKGKFYHCEGHDTKNITNKPDCLQANFKWLRRKYN
FDNLGQALMSLFVLSSKDGWVNIMYDGLDAVGIDKQPQRNHNPWMLLFFISFLLIVSFFV
LNMFVGVVVENFHKCRQHQEAEEARRREEKRLRRLEKKRRKAQRRPYYANYSPARLYIHT
MCTSHYLDLFITFIIAINVITMSMEHYEQPIKLEVALKYCNYVFTVVFVFEAVLKLVAFG
FRRFFKDRWNQLDLAIVLLSIMGITLEEIELNASLPINPTIIRIMRVLRIARVLKLLKMA
TGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLVCNDENPCEGLSRHATFE
NFGMAFLTLFRVSTGDNWNGIMKDTLRECSGEDKSCLTYLPYFSPVYFVTFVLIAQFVLV
NVVVAVLMKHLEESNKEAKEDAELDAVIELEMSRGLGASSSSIGRTPVLENRTLHPGQES
MKSESPVHVKQATGDPRYNKLVVEDKKENLLTVRKVSVSRMHSLPNDSYMFRPVRPAQAP
FPLPESELYQGTSPTGSVTSVQSQPVEVSTHLEVPSNCVQHSFASRSQGLNTLPKIPPPQ
RMPRSPSVNRLLRRQEAVRTDSIDGISAESKGNMNIQSTDSLQLKVSPQHILTAPSLFQP
SPVSPKVTPQASPPSLQCGKQTSVHTHRQVYSQHSIPCRSPSHSSHSTSVGSMHFDSVDP
ADEEVRHINNSAKIWRSQSEARSLTSPSLMSTNLAAAALRNSTTSLSGAGMEVELKKFYS
VDAHGFLAKPSWGDDPRRHSIEICPSIDDGDASFQFEDPFSTEQDQQPPICVQSDSEYIL
SPRRKKKMSPPCISIDPPLENEGGPASLSAMSESSMHLRRRTPSCESGPYRDSLELLELQ
PGDQTSKSERRASPACRNEHLTIPDFSFDQSDASSLSSLSDLLSDSNHSTPSSSVSVDSR
AGSVASELTKVDLLNPSDNSDVHRPEDSADLLKATRSPLRKRGLIRMANTREDTDELVV
NT seq
7020 nt
NT seq
+upstream
nt +downstream
nt
atgttggtcatccttttgaactgcgttacactgggaatgttccagccatgtgaagatgtg
gcatgtaggtctgatcgatgtaccatacttaaggcattcgatgactttatttttgccttc
tttgctgtggaaatggtcattaagatgatagctcttgggatatacggacagaaatgttac
ctaggagatacttggaatcgtctggacttcttcattgtaatggcagggatgctggaatat
tcactggatggacacaatgttagtctctccgcaatccgaactgtccgggttctcagacca
ctaagagccattaaccgagttccaagtatgagaattctagtgactttactacttgatact
ctgcctatgttaggcaatgtccttctcctttgtttttttgtcttctttatatttgggatt
gtcggagtccagctgtgggccggtctactaaggaacaggtgttttttngaaggcaacttt
gcaatgtattacaatgtttcgttacctttatattaccacgctcatggggatgagagtcca
tttatttgttcactgcctcaagataacggtatgcagaaatgcctggaacttccgaatttt
aaagaaaatggagccaaatgtttcctcagcctggatccttacaaccacctaacatacaat
tcggaagtgagcaacagaagtggctgtataaactggaatcaatattacaacgtgtgcaac
accggaaatgtaaacccccataagggagccatcaattttgataatataggatatgcctgg
atcgccatttttcaggttattaccctggaaggatgggtggacatcatgtattatgttatg
gatgcacattctttttacaattttatatattttatattgcttataatagttggttccttc
ttcatgattaacctgtgtttggttgtcatagcaactcagttttctgaaacaaagcaacga
gagaatcaattaatgcaggagcagcgagcacgttttctttcaaacgatagcacaattgca
agtttctctgagccaggcagttgctatgaggagctcattaagtacatttgccacctctta
aggaaggtgaaacgccgaattctgcgtctttacaacagttggcagaataagcaaagaaag
aaggtcgaccccaacagcacaaatgaccaaggaaagagatggcggaataagggccgagta
cggtcaattcatcatttaatccatcatcatcaccatcaccatcaccaccattatcatatc
agcaatggcagttcaagggcgcagcgagacagtccagaactctgtgatatggagatgaaa
tcattgcgagctagcagtaagctcatgcttccgtcacctgcactgaaccatcagactcct
tctccgggtgccgaatcagttcacagtatttaccatgctgactgccactttgaaggccct
caaatgacttgcaagtcttccactgcagctaatgttaaactgatggctggcctcacacac
catggggacatgaactacccaacaatagtatcctctgtgactagcagaagcagctccata
ccaaaatcaaaaggcaacaaaagcagtaatgctcccctcacagtgggtaaaatcagctct
aacttgagcatgttggacccctacggcaaactgcaccattttgtgggagaacatggtgtc
tgtcgaagtgcaagcaagttgtcggggctcagcatgccatgctctgccctcagcactcaa
gccgggatcatggcctgtgaacttcagagctgcccctactgtgccaaggtcttagaaaac
ccagaactggagatcactgattcagaaagttgtgattccgatgctgatggcatctatgag
ttcacacaagacgtccagcggactgaccaaagggatcggaagcacaagaacaaaaaggcg
ccaaaggaaaagaataaatgtaccttgttcttgctattattctctgagaaaacaaaaaga
attgtggagagcaaatatttcaatcgtgggattatgatagccatcctgatcaatactctg
agcatgggcattgagcaccatcatcagcccgaggagcttacaaacgccctggagatcagt
aacatcgtgttcaccagcatgtttgcaatggaaatgatcctcaaacttctagcatttggt
ctctttgactacattaagaatccatacaatatctttgatggaattatagtcattatcagc
gtgtgggaaattattgggcaaaatgatggcggcctttcagtgctaagaacgttcaggctc
ctccgagtcttgaagctggtgcgtttcttgcctgcattgagacgccagctcgtggtcctg
atgaaaacgatggacaacgtggccaccttctgcatgctgctcatgctcttcatatttatc
ttcagtattctaggcatgcacctgtttggatgtaaattcagcttgacgactgagaatggg
gacacgatcccagacagaaagaattttgattccttattgtgggcaattgtcaccgtattt
cagatccttactcaggaggattggaatgtagtgctgtataacggaatggcttccacttca
ccttgggctgccctctactttgtggcattgatgacttttggcaactatgtactgtttaac
ctgctcgttgctattcttgtggaaggcttccaagcagagggtgatgccaatcgatcagat
acagacgaagacaaaacatctgctaattttgattatgagtccgagaggttgaaagagcct
tccacagaattaaaaatgtattcagtagtcatgacaccaaacggacacttggattcccga
agcagcattgcgcctccgattatcctccgcacggcagctacccccatgcctatcccaaag
agttccttgtatatggattcagttcacacttacgtggagagtcgaagaggcagcagtgct
tcgattgatcctataaattatgaccagagatctttgtccagcgtccgcagttcacctagc
gccccttggagcactaacagcaactgggggagccgtcggtccagctggcatagccttggg
agggcaccaagcctgaaaaggaagaatcagttgggagaaagggaatctctgctctctggt
gaagggcaccaaagctccgacgatgatggcgaatctgaagatgcaaagtctagcaaaatg
ggcagcgtcagcgggtggtctttgcaccaccgagcggaatcggtggacaccaaaggttcc
ttggacttccctgagctccttcaagtaccagtgatgagacatcctgtcaccatgaatccc
atgagcatgactccacctgactaccatgactgcaatggcaaaaccctgcacgttcccaat
gacgtcttccttcgtatggaccaacacaaagaagatccaagtgattatgaagatgaaatg
gatgaaagctactgttttaggattcaaacatttctggagccgtacaaaccaaactggtgt
aaagcacatgaggattgggctctttatctattctctcctcaaaaccggttccgcataata
tgccagaaggtcattgctcacaagatgtttgatcacgtggttctggttttcatattcctc
aactgcatcaccattgctctcgaaagacctgagattgacccaagaagcacagaacgtctt
ttccttagtgtttcaaatcacatcttcacggctatttttgttgctgaaatgactgttaag
gttgtggcacagggattcttttcgggtgaaagcgcttatctccaaagcagctggaacatt
ttggatggaatcctggtctttgtttctgtcattgacatcgttgtctccatggcatcagca
ggcggagcaaagatccttggtattcttcgtgtgctgcgccttttgagaactctgagaccc
cttcgagtcatcagcagagctccaggtctaaaactggtagtggaaaccttaatatcttcc
ctgagacctattgggaatattgtgctcatctgctgtgctttctttatcatctttggaatc
ctaggggtccagttgttcaaagggaagttttaccactgtgaaggacatgatacgaagaac
attactaacaagccagattgcctccaagccaacttcaaatggttgcgccgtaaatataat
tttgataatctgggacaggcattgatgtcactctttgtgttatcctccaaagatggttgg
gtgaatataatgtatgatggcctggatgctgtgggaatagacaaacagccgcaaaggaat
cacaacccatggatgcttctgtttttcatctccttccttctgattgtgagtttcttcgtg
ctcaacatgtttgttggtgtcgtggtggagaacttccacaaatgccggcagcaccaggaa
gctgaggaagcccggcggcgcgaggagaagcgtttgcggcggctcgagaaaaagcgccgg
aaagcccagcgcaggccgtattatgccaactactcacctgctcgactttacatccacaca
atgtgtaccagccactacttggatctgttcatcacattcattattgctatcaatgtcatc
actatgtccatggagcactatgaacagccaattaaacttgaagtggctctgaaatattgc
aattatgtcttcaccgtcgtctttgtcttcgaggctgttcttaaactagttgcatttggc
ttccggagattttttaaagacaggtggaaccaactagatcttgccattgtgcttctctca
ataatgggaataaccttggaagaaattgaacttaatgcctcgctccctattaaccccacc
atcattcgtattatgagagttctacgaatcgcaagagtgctgaaactgctcaagatggcg
actggaatgagagctttactcgacactgttgtacaagctttgcctcaggtgggaaatctt
ggcttattgttcatgctcttattttttatctatgcggctctaggggttgaactcttcggt
aaactggtttgtaacgatgaaaacccatgtgaaggactgagtcgacatgcaacgtttgag
aattttggaatggctttcctgactttattccgtgtttccaccggtgacaactggaatgga
ataatgaaggacactctgcgtgagtgcagtggagaggacaagagctgcctcacctacctc
ccctatttctctcctgtgtattttgtcacatttgttctgatcgcccagtttgtgctggtt
aacgtggtggtcgccgtgctgatgaagcacttggaggagagcaataaagaagcaaaggag
gatgcagagctcgatgcagtgattgagctggagatgtcacgagggcttggggcgtcaagc
agcagtattgggcgtacgcctgtacttgaaaacagaactctgcaccctgggcaggagtca
atgaaaagcgaatcaccagtgcatgtaaaacaagccacaggagatcctcgatacaacaag
ctggtggtagaggataagaaggaaaatttacttacagtccggaaggtctcggtatctcga
atgcattccttaccaaatgacagttacatgttccgccccgtcagaccagcacaagctccc
ttccccttgcctgagagtgagctgtatcaagggacatcacctacagggtctgtgacttca
gtccagtcccaacctgttgaagtctctacacaccttgaagttccttccaactgtgttcag
catagctttgcttccagaagccaaggcctcaataccctccctaaaatacctccaccacag
agaatgccaagatctcccagtgtaaacaggctgctacgtagacaggaggctgtcagaact
gactctatagatggtatcagtgctgaatccaaaggcaacatgaacattcagtcaactgac
agtcttcaactgaaagtttcacctcagcacatcttgacggctccatcactgttccagcct
tcaccagtttctccgaaagtcacacctcaagcttcaccaccatcactccagtgtggcaag
cagacgagcgtccacacacacaggcaggtctacagccagcacagcatcccatgtcgctca
ccgagccacagcagtcacagcaccagtgtcgggagcatgcactttgactctgtggaccca
gccgatgaagaagttcggcacatcaacaactcagcgaaaatctggagatcacagtcagag
gcgaggagtttgacatcgccatctttaatgtccacaaaccttgcagctgctgcactaagg
aacagcacaaccagcttgtctggagctggcatggaagtggaattgaagaaattttatagc
gttgatgcacatgggtttctggccaagccttcttggggcgatgacccgaggaggcattcg
attgaaatctgcccttcgattgatgatggcgatgcaagctttcagtttgaggaccccttc
tccaccgagcaggaccagcagcctcctatctgcgtgcagtctgattccgaatacattctc
tctcctcggaggaaaaagaagatgagcccgccctgcatctccatagatcccccattggag
aatgaaggtgggcctgcatctctcagtgcaatgtctgagagcagcatgcacttacgcagg
cggacaccatcctgtgagtcaggaccttacagggattcattggaacttctcgagctacag
cctggggatcagacctcgaaatcagagagaagggcgtctcctgcctgtcgaaatgagcac
cttaccatcccagacttttcattcgaccagtcagacgcgagctcgttaagtagtctgtct
gacctgttatctgacagtaatcactccaccccttcatccagtgtctcggtggattccagg
gcaggctcggtggcatctgaactgacaaaagtggacctcttaaaccccagtgacaattct
gacgttcacaggccggaggacagtgcagatttactgaaggccaccaggagccctctgaga
aaaaggggtttaatccgcatggctaacacacgagaagatacagacgagctcgtagtatag
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integrated database retrieval system
